KEGG   Clupea harengus (Atlantic herring): 105899609
Entry
105899609         CDS       T09045                                 
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105899609 (tbpl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105899609 (tbpl2)
   03021 Transcription machinery [BR:char03021]
    105899609 (tbpl2)
Transcription factors [BR:char03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    105899609 (tbpl2)
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     105899609 (tbpl2)
  RNA polymerase III system
    TFIIIB
     105899609 (tbpl2)
  RNA polymerase I system
    SL1/TIF-1B
     105899609 (tbpl2)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 105899609
NCBI-ProteinID: XP_012682263
Ensembl: ENSCHAG00000015292
UniProt: A0A6P3VVD2
LinkDB
Position
14
AA seq 318 aa
MDDEASMEGYFREAVNDPTDYMFEGDMGLQGPLQLQDPSFLASISGEQDKDLSEDLDLSF
LPDELSTQDEPVQNSSQHAALHQQTLNDSGVYTDAPEEATAVAATGQNGQVPPVASPFGS
LSMSPMTPMAPMTPLTESSKIIPQLQNIVSTVNLDCRLDLKSIALQARNAEYNPKRFAAV
IMRIRDPRTTALIFSSGKMVCTGAKSEEASRLAARKYARVVQKLGFPAKFLDFKIQNMVG
SCDVLFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERTE
IYEAFEHIYPILKGFRKQ
NT seq 957 nt   +upstreamnt  +downstreamnt
atggatgacgaagcgtcaatggaggggtattttcgggaggctgtaaatgaccccactgat
tacatgtttgagggggacatgggcttgcagggcccattgcagctccaagacccctccttc
ctcgcatccataagtggggaacaggataaggacctatctgaggacctggacctcagcttc
ctgcccgatgagctcagcacacaggacgagccagtgcaaaactcgtcacagcatgcagcc
ctgcatcagcagactctcaacgacagtggtgtttacacagatgcacctgaggaggcgacg
gcagtggccgcgaccgggcagaatggacaggtcccacctgtggcttctcccttcggctct
ctttccatgagcccaatgacacccatggcccccatgacgccactaacagagagctccaaa
atcatcccacagcttcagaacattgtgtcaacagtgaatttggattgccgccttgaccta
aagtccattgcactccaagccagaaatgctgaatacaatcctaagcgtttcgctgctgtc
atcatgaggatcagggatcccaggacaacagcactcatcttcagctcaggaaagatggtc
tgcactggagccaagagcgaagaagcgtccaggcttgctgcccgcaagtatgctcgtgtg
gtgcagaagctgggtttcccagccaaattccttgacttcaagatccagaacatggtggga
agctgtgacgtcctgttccccatccgactcgagggcctggtgctaactcaccaacagttc
agcagctatgagccagagctcttcccaggtttgatctacaggatggtgaagccgcgcatc
gtactgctcatcttcgtgtcgggcaaagtggtactgacaggcgccaaagagcgaactgag
atttatgaagcatttgaacacatctacccaattctaaaaggattcagaaaacagtaa

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