Clupea harengus (Atlantic herring): 105899609
Help
Entry
105899609 CDS
T09045
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105899609 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105899609 (tbpl2)
03021 Transcription machinery [BR:
char03021
]
105899609 (tbpl2)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105899609 (tbpl2)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105899609 (tbpl2)
RNA polymerase III system
TFIIIB
105899609 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
105899609 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
105899609
NCBI-ProteinID:
XP_012682263
Ensembl:
ENSCHAG00000015292
UniProt:
A0A6P3VVD2
LinkDB
All DBs
Position
14
Genome browser
AA seq
318 aa
AA seq
DB search
MDDEASMEGYFREAVNDPTDYMFEGDMGLQGPLQLQDPSFLASISGEQDKDLSEDLDLSF
LPDELSTQDEPVQNSSQHAALHQQTLNDSGVYTDAPEEATAVAATGQNGQVPPVASPFGS
LSMSPMTPMAPMTPLTESSKIIPQLQNIVSTVNLDCRLDLKSIALQARNAEYNPKRFAAV
IMRIRDPRTTALIFSSGKMVCTGAKSEEASRLAARKYARVVQKLGFPAKFLDFKIQNMVG
SCDVLFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERTE
IYEAFEHIYPILKGFRKQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaagcgtcaatggaggggtattttcgggaggctgtaaatgaccccactgat
tacatgtttgagggggacatgggcttgcagggcccattgcagctccaagacccctccttc
ctcgcatccataagtggggaacaggataaggacctatctgaggacctggacctcagcttc
ctgcccgatgagctcagcacacaggacgagccagtgcaaaactcgtcacagcatgcagcc
ctgcatcagcagactctcaacgacagtggtgtttacacagatgcacctgaggaggcgacg
gcagtggccgcgaccgggcagaatggacaggtcccacctgtggcttctcccttcggctct
ctttccatgagcccaatgacacccatggcccccatgacgccactaacagagagctccaaa
atcatcccacagcttcagaacattgtgtcaacagtgaatttggattgccgccttgaccta
aagtccattgcactccaagccagaaatgctgaatacaatcctaagcgtttcgctgctgtc
atcatgaggatcagggatcccaggacaacagcactcatcttcagctcaggaaagatggtc
tgcactggagccaagagcgaagaagcgtccaggcttgctgcccgcaagtatgctcgtgtg
gtgcagaagctgggtttcccagccaaattccttgacttcaagatccagaacatggtggga
agctgtgacgtcctgttccccatccgactcgagggcctggtgctaactcaccaacagttc
agcagctatgagccagagctcttcccaggtttgatctacaggatggtgaagccgcgcatc
gtactgctcatcttcgtgtcgggcaaagtggtactgacaggcgccaaagagcgaactgag
atttatgaagcatttgaacacatctacccaattctaaaaggattcagaaaacagtaa
DBGET
integrated database retrieval system