Clupea harengus (Atlantic herring): 105899630
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Entry
105899630 CDS
T09045
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105899630 (irf2bpl)
04121 Ubiquitin system [BR:
char04121
]
105899630 (irf2bpl)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
105899630 (irf2bpl)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Atypical E3
105899630 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
105899630
NCBI-ProteinID:
XP_012682283
UniProt:
A0A6P3VVQ5
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All DBs
Position
14:10548671..10552491
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AA seq
667 aa
AA seq
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MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEAVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRSPGPAPPPTVKTQAAMSAKETVQLNHVDGSSKQQAGLDRYSLSTERSRFDYSS
ISTHTGRLPNGLSGPNGFPKQDDGPPELNRQSPNSRRNHGLVVVPSQMNVPPNLLPQTML
NGPPSAAAIAQHNLASRAPPPSSIGTALSMASQSMSEQGRRPGSVSSTDQERDLKEKQRN
AESLGELSESLRNRAEEWANKPKIVRETLITLSNSTPFDVRFKKDHSLLGRVFAFDAVSK
PGMDYELKIFIEYPTGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYDKKHGSGD
WRLLGDLLPESVRFFKESLGAEMLPQPYIDASCPLLPSALVNIPRALPSASAPRTGMRKR
KASPEPDSAEGALKLADEQQRQQWMASQSEAMKLTMASGSFTASHGGPPPLGPGHSVHSS
RSTPPESAPQNGQSPMAALMSVADTLGNAHSPKDNNSVHSTTSTRHNSSSPVSPASVSGQ
RRLASRNGDINLAGAPSQSSAHPGMEQVHPQNIPDSPMANNGPLCCTICHERLEDTHFVQ
CPSVPNHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVK
VKKERDP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacaagtctcctcgtcgaggaggcagtcctgttatctgtgtgatttgccc
cgcatgccctgggctatgatttgggattttacggaggctgtctgcagaggttgcgtaaat
tatgaaggtgcagatcggatcgagtttgttattgagactgcgcggcacctcaagcgagct
catggcttccaggaagggagatccccgggaccagcgccaccgcctacggtgaagactcaa
gcggcaatgtcagctaaggaaacggtgcagctgaaccatgtggacggttcctcaaaacag
caagcagggctggatcgctattctctgagtacagagagatcccgtttcgattattccagc
ataagcacccatactggacggctcccgaatgggctgagcggacctaatggctttccaaaa
caagacgacggacctcctgaattgaacaggcagagcccaaactcgcgtcggaaccacggg
cttgtggtggtccccagtcagatgaatgtgcctcccaaccttctcccgcagaccatgctg
aacggacccccctcagctgcagccatagcccagcacaacttggccagcagagccccaccg
ccgtccagcataggaaccgcgctgtccatggcgtcccagtcgatgtcggagcaaggcagg
agaccgggttccgtctccagtacggaccaagagagagacctcaaggagaagcagcgcaac
gctgagtctttgggggaacttagtgaaagtttgaggaacagagccgaagaatgggccaac
aaacctaagatagtgcgagagactttgatcacgctctcaaacagcaccccttttgatgtg
aggttcaaaaaggatcactcgctcctgggcagagtgtttgctttcgatgctgtttccaaa
cccgggatggactatgagctaaaaatattcattgaataccccactggatctggtaacgtg
ttttcaagtgcatctggagtcgccaaacagatgtaccaggactgcatgaaagacttcggc
agggggctctcatcgggctttaagtatttggagtatgacaaaaagcatggttcgggtgac
tggcggcttctgggcgatttgttgccggagtcggtgcgttttttcaaagagagtttggga
gcggaaatgttgccacaaccctacatcgatgctagctgcccgctgttaccctctgcactg
gtcaacatcccccgtgccttgccgtcagcaagtgcgcccaggacaggtatgcgtaagcgc
aaagcatccccagaacccgactccgctgagggagctctgaaattagcagacgagcaacag
aggcaacagtggatggctagccagagcgaagctatgaaactgacaatggcatcgggatcg
ttcactgcttcgcacggcggaccaccacctctcggaccggggcactcggttcactcaagt
cggtcaacaccgcctgagtccgctcctcagaacggacagtcacccatggctgcactcatg
tcggtcgcagacactttaggcaacgcacactcgccaaaggacaacaactctgttcattcc
accacgtctactagacacaacagtagtagcccagtgtcccccgcctctgtgtcaggacaa
cgtcgcttggcatcccgcaatggggacattaatttggccggagcgccctctcaatccagt
gcccacccaggcatggaacaggtccaccctcaaaacattccagattcacccatggcaaat
aacggaccactgtgttgtaccatttgtcacgaacgtttagaagatacccactttgttcag
tgtccgtccgtccccaaccataaattctgtttcccttgctcgcgagagagcatcaaagca
cagggagcaactggcgaggtgtattgccccagtggagaaaaatgccccctggtaggttca
aatgtgccttgggctttcatgcaaggtgagatagcaaccattttagccggggacgtgaaa
gtaaaaaaagaacgagatccataa
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