Clupea harengus (Atlantic herring): 105899651
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Entry
105899651 CDS
T09045
Symbol
si:dkey-33c12.3
Name
(RefSeq) alpha-internexin
KO
K04572
neurofilament light polypeptide
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105899651 (si:dkey-33c12.3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105899651 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105899651 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
105899651 (si:dkey-33c12.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Golgin_A5
ATG16
Fib_alpha
Phage_GP20
TMEM247
Snapin_Pallidin
DUF2721
Motif
Other DBs
NCBI-GeneID:
105899651
NCBI-ProteinID:
XP_012682306
Ensembl:
ENSCHAG00000012662
UniProt:
A0A6P3VVR2
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Position
14:12763890..12768013
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AA seq
397 aa
AA seq
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MSYNSLLSPSLSRRLWDDSSSHISSRLHRPSHSSFSSALQRRGAPRCNRSLTSERCDLSQ
ASVLSGELRDTRAQEREQLVDLNNRFACYIDRVRELEQHNRALLGQLEALQRGLGHPSPL
QRLYEEEARALQAKVEEEAIEKSHMEAQRERMREELARLRERWEEEAERRGRAEEALSRA
QEEASRAALGNCDAEASLVTLVMEAGFLKKVFAEEEAGLRAELQALAAGQDVVRVAVGGA
DLSVALREIRGQYERQASRNTVAAEEWFRGKMVAAAEVVERNEEAVRAVRAETAEYRWQL
QARSAELEVLRNVIDSLNSQLADLEEEQGKEVAKYQGRIIDLEQGIGDAKEEMSRYLREY
QDLLNVKMALDIEIAAYRKLLEGEEVRLTFSALPALA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaactcgttactttctccgtctctgtcccggcgcttgtgggatgactcctcg
tctcacatctcctctcggctccaccggccctcacactcctccttctcctcggcgctccag
aggagaggggccccacgctgcaaccggagcctgacgtcggagcgctgcgacctctcccag
gccagtgttctgagcggcgagctgcgggacacacgggcccaggagcgtgagcagctggtg
gacctgaacaaccgtttcgcctgctacatcgaccgtgtgcgtgagctggagcagcacaac
agggcccttcttggccagctagaggccctgcagcgcggcctcggacacccctcacccttg
cagaggctctacgaggaggaggcgcgtgccctgcaggccaaggtggaggaggaggccatt
gagaagtcgcacatggaggcgcagagagagcgcatgcgagaggagctggccaggctgagg
gagcgctgggaggaagaggccgagaggagaggcagggctgaggaggcgcttagcagagcc
caggaggaggccagcagggcggcgctagggaactgcgatgcagaggccagcctggtgacc
ctggtgatggaggcagggtttttaaagaaggtttttgcggaagaggaggcgggactgagg
gcggagctgcaggcgttggcggcagggcaagacgtggtccgggtggcggtgggcggagct
gacctgtcagtggcattgagggagatccgtgggcagtacgagcggcaggccagccggaac
actgtagcggcggaggagtggttccgggggaaaatggtggcggcggctgaggtggtggag
cggaatgaggaggcggtgagggcggtgcgggcagagacggccgagtaccggtggcaactg
caggcccgctctgccgaactggaggtgctgcgaaacgtcatcgactcgctcaactcgcaa
cttgcggatctagaggaggagcagggcaaggaggttgccaagtaccagggaaggataata
gatttggagcagggcattggcgatgcgaaagaggagatgtcacggtacctacgggagtac
caggacctcctgaatgtgaagatggctctggacatcgagattgctgcatacaggaaactt
ctggaaggtgaagaagttcgtctgaccttctctgctcttcctgcccttgcttaa
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