KEGG   Clupea harengus (Atlantic herring): 105899651
Entry
105899651         CDS       T09045                                 
Symbol
si:dkey-33c12.3
Name
(RefSeq) alpha-internexin
  KO
K04572  neurofilament light polypeptide
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:char01009]
    105899651 (si:dkey-33c12.3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105899651 (si:dkey-33c12.3)
Protein phosphatases and associated proteins [BR:char01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105899651 (si:dkey-33c12.3)
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type IV
     105899651 (si:dkey-33c12.3)
SSDB
Motif
Pfam: Filament Filament_head Golgin_A5 ATG16 Fib_alpha Phage_GP20 TMEM247 Snapin_Pallidin DUF2721
Other DBs
NCBI-GeneID: 105899651
NCBI-ProteinID: XP_012682306
Ensembl: ENSCHAG00000012662
UniProt: A0A6P3VVR2
LinkDB
Position
14:12763890..12768013
AA seq 397 aa
MSYNSLLSPSLSRRLWDDSSSHISSRLHRPSHSSFSSALQRRGAPRCNRSLTSERCDLSQ
ASVLSGELRDTRAQEREQLVDLNNRFACYIDRVRELEQHNRALLGQLEALQRGLGHPSPL
QRLYEEEARALQAKVEEEAIEKSHMEAQRERMREELARLRERWEEEAERRGRAEEALSRA
QEEASRAALGNCDAEASLVTLVMEAGFLKKVFAEEEAGLRAELQALAAGQDVVRVAVGGA
DLSVALREIRGQYERQASRNTVAAEEWFRGKMVAAAEVVERNEEAVRAVRAETAEYRWQL
QARSAELEVLRNVIDSLNSQLADLEEEQGKEVAKYQGRIIDLEQGIGDAKEEMSRYLREY
QDLLNVKMALDIEIAAYRKLLEGEEVRLTFSALPALA
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgagctacaactcgttactttctccgtctctgtcccggcgcttgtgggatgactcctcg
tctcacatctcctctcggctccaccggccctcacactcctccttctcctcggcgctccag
aggagaggggccccacgctgcaaccggagcctgacgtcggagcgctgcgacctctcccag
gccagtgttctgagcggcgagctgcgggacacacgggcccaggagcgtgagcagctggtg
gacctgaacaaccgtttcgcctgctacatcgaccgtgtgcgtgagctggagcagcacaac
agggcccttcttggccagctagaggccctgcagcgcggcctcggacacccctcacccttg
cagaggctctacgaggaggaggcgcgtgccctgcaggccaaggtggaggaggaggccatt
gagaagtcgcacatggaggcgcagagagagcgcatgcgagaggagctggccaggctgagg
gagcgctgggaggaagaggccgagaggagaggcagggctgaggaggcgcttagcagagcc
caggaggaggccagcagggcggcgctagggaactgcgatgcagaggccagcctggtgacc
ctggtgatggaggcagggtttttaaagaaggtttttgcggaagaggaggcgggactgagg
gcggagctgcaggcgttggcggcagggcaagacgtggtccgggtggcggtgggcggagct
gacctgtcagtggcattgagggagatccgtgggcagtacgagcggcaggccagccggaac
actgtagcggcggaggagtggttccgggggaaaatggtggcggcggctgaggtggtggag
cggaatgaggaggcggtgagggcggtgcgggcagagacggccgagtaccggtggcaactg
caggcccgctctgccgaactggaggtgctgcgaaacgtcatcgactcgctcaactcgcaa
cttgcggatctagaggaggagcagggcaaggaggttgccaagtaccagggaaggataata
gatttggagcagggcattggcgatgcgaaagaggagatgtcacggtacctacgggagtac
caggacctcctgaatgtgaagatggctctggacatcgagattgctgcatacaggaaactt
ctggaaggtgaagaagttcgtctgaccttctctgctcttcctgcccttgcttaa

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