Clupea harengus (Atlantic herring): 105899702
Help
Entry
105899702 CDS
T09045
Symbol
psme4a
Name
(RefSeq) proteasome activator complex subunit 4A isoform X1
KO
K06699
proteasome activator subunit 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
105899702 (psme4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105899702 (psme4a)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Regulatory particles
PA200
105899702 (psme4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM10_mid
DUF3437
HEAT
Motif
Other DBs
NCBI-GeneID:
105899702
NCBI-ProteinID:
XP_031434364
Ensembl:
ENSCHAG00000022960
UniProt:
A0A6P8G504
LinkDB
All DBs
Position
13:complement(28827759..28877954)
Genome browser
AA seq
1847 aa
AA seq
DB search
MKKEVSDTLGFVPQKDIVYNKLLPYADKLDGESNEFLARIKENLGRAVYLREIWPGVLFW
TRKLSTYLRLYGRKFSKEDHVLFIKLLYELVTIPRLEISMMQGFARLLINLLKKKDLLSR
EDLELPWQPLYELHERILYSKTEHLGLNWFPSSLRPRSTSRHILVKLAQRCSVDALLKAL
VKNCRPYFPESATQEMLEEWRPLLCPFDVTMQRAIGYFELFLPTTLPPELHHKGFKLWFD
ELMGLWVSVQNLPSWEVSLVNLFARLANDNIGYVDWDPYIPKIFTRILRSLNLPVGSSQI
MVSRFVTNAYDITHVVIWIAALLGGPSKKAQTQLTGLFNSISSFLHPSNHGRWLMKLMKL
LQRLPACVVRRLHRERHRSPTWLSPVPENHRLSEQDIDDFVESMKQPVLLAMFSKTGSLD
AAQALQNLALMRPELVIPPVLEKTYPAMETLIEPHQLTATLSCMICVARSLVSVGGRFPE
GPTHMLPLLMRALPGVDPNDFSKCMITFQLIATFATLVPLVDCSSAVHEREDLTQVEKEM
CSASAEFEDFVLQFMDRCFALIDSSSPDLTREEMETEKMTHLESLVELGLSSTFSTILTQ
CSMEIFQVALEKVFNFATTNIFETHVSGRMVADMCRAATKCHPEESLKLFVPHCCNAITQ
STANEEVQKEEELDKELLWNLQLLSEVTRLDGDKLLPYSAQLVRTLRQTLHLKCKQGYSL
ASNLLYHCLRSTALIYPVEYCSVPGGFQKPLSEYLPIKDWGRPGDLLNLGIQWHVPNADE
RAFVFEVLDLLLKPELQRLESYAQGEQGMSRDDVLQSLSIVQHCLLGAGALLPPLVGEPV
PELVRSVVDLDETRLYTGVEYDMSRENYREVICRVTRQLLKHILEHSEDDTKSLFAIIKI
ISDLLQFKGTHKHEFDSRWKSFALVKKAMENRLYGSKRHIRALLIDRVMLQHELRNLTVE
GCQYRSVHQDLLRDLLRLSTSTYSQVRSKAQNVLFNALGTYNFCCRDLIPKVLELLEPGR
TDITKQQFKGAMYCLLGNHLGVSLANLQYWDCIGLSWPAIVRSGLSTAMSLEKPSIMRLF
DDIADKIHRQYETIGIDFSIPESCCSVALRIMTSARLATSRPLPSEQEQQQGILQQEEKN
REALGKYQQLVHALLDCVNNRDLPWKFEHIAIGFLSLLLRDDHPLPTPAVLFFVKSLNHD
SLLVRKVAISAVAGIMKQLKKPHKKVPISPQKLCGESVSNEIIAGDRPDNQWLLYDSSRL
PRTQQAWEECCFVEKTHWGYYTWPRKLMVYAPAEEQPKQSLNREDMDEREQIIYDHFSDP
VFINQLIQFLSLEDRKGKDKFSPRRFCLFKGLFRNFGDAFLPVLQPHMERLVADSHESPQ
RCVAEIISGLIRGSKHWSYSQVEKLWALLCPMLRKALSNITVETYGDWGTCIATACESRD
PRKLHWLFEMLMESPVNGEGGSFVDACRLYVLQGGLAQQEWRVPELLHRLLQYLEPKLTQ
VYKNVRERIGSVLTYIFMIDVNLPHIQPTASPRISEFTERILVRLRPLMEGDEEIQNHVI
EGGSEEEQDERTQAIKLLKTVLKWLMTSAGRCFSSATPEQLQLLPLLFKIAPVENDDSYD
EMKQDAKTCLTLMSQGLLYPEEIPQVLCVLQEIAGISSWHARYTVLTYLQIMVFHNLFTF
MSDRKAVGHVRALVIRLLEDEQLEVREMAATTLSGFLQCSFLSMDAEMQAHFEALCKTRV
PKRKRRELGSAVDTIPSADLVHRHAGVLGLSACILSSPYDVPTWMPQLLMDLSVHLNDTQ
PIEMTVKKTLSNFRRTHHDNWQEHKQQFTDDQLVVLTDLLVSPCYYA
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaggtgtctgacacattaggttttgtccctcaaaaagacattgtttacaac
aaacttctgccttatgcagacaaattagatggagagtcaaacgagtttctcgccagaatc
aaggaaaacttgggacgagctgtttatcttagggaaatatggccgggtgtattgttttgg
acaagaaaactttctacatacctccggctgtacggcaggaagttcagcaaagaggaccat
gtgctcttcatcaagctgctgtacgagctggtcaccatccccaggctggagatcagcatg
atgcaggggttcgcccgcctcctcatcaacctgctcaagaagaaagacctgctctcaaga
gaggatttggagttgccgtggcaacctttgtacgagcttcatgagaggatcctctattcc
aaaacggaacacctgggccttaactggttccccagttctctgcggccacgttctacctct
agacatatattggttaagcttgcccagaggtgttctgtggatgctctgctgaaagccctg
gtgaagaactgcaggccgtacttccctgagtcggccacccaggagatgctggaggagtgg
cgtccgctgctgtgcccgtttgacgtcaccatgcagcgagccatcggctacttcgagctc
ttcctgcccaccacgctgcccccggagcttcaccacaagggcttcaaactgtggttcgat
gagctgatgggcctgtgggtgtcggtgcagaatctccccagctgggaagtgagtcttgta
aacctttttgcccgcctagccaacgacaacatcggctacgtagactgggacccttatata
ccgaagatcttcaccaggatcctgcgaagcttgaaccttccagtcggcagcagtcagata
atggtgtccagattcgtgacgaacgcttatgacatcacccatgtggtcatctggatcgca
gctctgctgggagggcccagcaaaaaggcccagactcagctgacgggcctcttcaacagc
atcagctccttcctccacccctctaaccacggacgctggctgatgaagctgatgaagctg
ctgcagcgtctcccggcgtgtgtggtccgccggcttcaccgcgagcgccaccgcagcccc
acatggctgtcgccggtgcccgagaaccaccgtctgagcgagcaggacatcgacgacttc
gtggagagtatgaagcagccggtgctgctggccatgttcagcaagacgggcagcctggac
gccgcccaggcactgcagaacctggccctcatgcggcccgagctcgtcataccgccggtg
ctggagaagacgtaccccgccatggagactctgatcgagccgcaccagctgacggccacc
ctcagctgcatgatctgcgtggcccgtagcctggtgtccgtgggcgggcgcttccccgag
ggccccacccacatgctgcccctgctcatgagggcactgccaggggtggaccccaacgac
ttcagcaagtgcatgataacattccagctcatagccacgttcgctaccctggtgcctttg
gtggactgctcctccgcggtgcacgagcgggaggacctcacacaggtggagaaagagatg
tgctccgcctcggcagagtttgaagacttcgtcctacagttcatggacagatgtttcgcc
ctgattgacagcagctctcccgacctcacgagagaggagatggagacggagaagatgacc
cacctggagagtctggtggagctgggtctctcctcgaccttcagcaccatcctcacacag
tgctccatggagatcttccaggtggctctggagaaggtgttcaacttcgccacgaccaac
atcttcgagacgcacgtgtccgggaggatggtggccgacatgtgcagagctgctaccaag
tgtcacccagaggagtccctgaagctcttcgtgccacactgttgtaatgccataacccaa
agcacagccaatgaggaggtgcagaaggaggaggagcttgataaggagctgctgtggaac
cttcaactcctgtctgaggtgacccgtctggacggcgacaagctgctgccttacagcgcc
cagctggtgcggaccctgcggcagacgctgcacctgaagtgcaagcagggctacagcctg
gcgtccaacctcctgtaccactgcctgcgctccaccgccctgatctaccccgttgagtac
tgcagcgtccccggcggcttccagaaacctctctccgaatacctgcccatcaaggactgg
ggtcgcccgggtgacctgttgaacttgggcatccagtggcacgtgcccaacgcggacgag
cgggcgttcgtcttcgaggttctggacctgctgctgaagcccgagctccagcgtctggag
agctacgcccagggagagcaggggatgagcagggacgatgtcctgcagagtctgtccatc
gtgcagcactgcctcctgggagccggagccctccttccccccttggttggagagcctgta
cccgagctggtccgcagcgtggtggatctagacgaaaccagattgtacacgggagtggag
tatgacatgtccagagagaactacagggaggtcatctgcagggtcacgaggcagctgttg
aagcacatcctggagcactcggaagacgacaccaagtccctgtttgccatcatcaagatc
atcagtgacctgctgcagttcaaaggcacacacaagcacgagtttgactcgcggtggaag
agctttgcactggttaagaaagccatggagaatcggctctacggcagcaagcggcacatc
cgcgctctgctcatcgacagggtcatgctgcagcacgagctgcgcaacctgacagtggag
ggctgccaatataggagtgttcatcaggacctgctccgagatctgctgaggctgtcaact
agcacctacagccaagtgcgcagtaaagcccagaacgtgctgttcaatgcgctgggcacc
tacaacttctgctgccgcgacctcatccccaaagtgctggagctgctggagccggggcgc
accgacatcaccaagcagcagttcaagggtgcgatgtactgtctgctggggaaccacctg
ggcgtgagtctggccaacctgcagtactgggactgcatcggcctcagctggcccgccatc
gtgcgctcgggactcagcaccgccatgtccctggagaagccgtcgatcatgcgcctcttc
gacgacatcgccgacaagatccaccgccagtacgagaccatcggcatcgacttctccatc
cccgagagctgttgtagcgtggctctgcggatcatgacctcagcgcgcctggcgaccagt
cggcccctcccctcggagcaggagcaacagcaggggatcctccagcaagaggagaagaac
cgagaagcactaggaaaataccagcagttggtccatgctcttctggactgtgtgaacaac
agagacctgccctggaagtttgagcacatcgccatcggcttcctgtcgctgctgctgagg
gacgatcacccgctccccacgcctgcagtcctcttcttcgtcaagagcctcaaccacgac
tcccttctcgtgcggaaggtggcgatctcagcagtggctggtatcatgaagcagctgaag
aaaccccataagaaagtgcccatcagtccccagaagctatgcggagagtctgtgtccaat
gagatcatcgccggcgaccggccagacaaccagtggctcctgtacgacagcagccgcctg
ccgcgcacccagcaggcctgggaggagtgctgcttcgtggagaagacccactggggatac
tacacctggccacggaagctcatggtgtacgcgcctgcggaggagcagcccaaacaaagc
cttaacagagaggacatggatgagcgggagcagatcatctatgaccacttctccgacccc
gtgttcatcaaccagctcatccagttcctgtctctcgaggaccgcaagggcaaagacaag
ttcagcccccgccgcttctgcctctttaagggactcttccggaactttggcgacgccttc
ctgcctgtgctgcagccccacatggagcgtctggtggccgactcccacgagagcccccag
cgctgcgtggccgagatcatctccggcctcatcagaggcagcaaacactggagctacagc
caggtggagaagctgtgggctttgctgtgcccgatgctgcgcaaagctttatccaacatc
accgtggaaacctacggagactggggcacctgcatcgccacggcctgcgagagcagagac
ccgcggaagcttcactggctgtttgagatgctgatggagtcgccggtgaacggagaggga
ggctcttttgtggacgcctgccgtttgtacgtgcttcagggagggctcgcccagcaggag
tggagagttccggaactcttacaccggctgctgcagtacctggagcccaaactcacgcag
gtctacaagaacgtgagggagaggatcggcagtgtgctcacctacatcttcatgatcgac
gtcaacctgccccacatccagcccacggcgtccccgcgcatctcggagttcaccgagcgc
atcctggtccgcctgcggccgctgatggagggcgacgaggagatccagaaccacgtgatc
gagggcggcagcgaggaggagcaggacgagcgcacgcaggccatcaaactcctcaagacg
gtgctgaagtggctgatgaccagtgcggggcgctgtttctcctcggccacccctgagcag
ctgcagctgctgcctctcctcttcaaaatcgctccggtggagaacgatgacagttatgac
gagatgaagcaggatgcaaagacgtgcctgacgctcatgtcccagggcctgctctacccc
gaggagatcccccaggtgctctgcgtcctgcaggagatcgcgggcatcagttcgtggcac
gcacgctacacggtgctcacctacctgcagatcatggtgttccacaacctgttcaccttc
atgagtgacaggaaggccgtcggtcacgtgcgcgcgctagtcatccgcctgctggaggac
gaacagctagaggtcagagagatggcggccaccaccctcagtggcttcctgcagtgcagc
ttcctgagcatggacgccgagatgcaggctcacttcgaggctctctgcaagactcgggtg
cccaagcggaagaggagggagctgggctcagcggtcgacaccatcccctctgctgacttg
gtacatcggcatgcgggtgttctggggctgagcgcctgcatcctctccagcccgtacgac
gtccccacctggatgccccagctgctcatggacctcagcgtccacctgaacgacacgcag
cccatagagatgaccgtgaagaagacgttgtccaacttccgtcggacgcaccacgacaac
tggcaggagcacaagcagcagttcaccgacgaccagctggtggtgctgacggacctcctg
gtctctccgtgttactacgcatag
DBGET
integrated database retrieval system
