Clupea harengus (Atlantic herring): 105899707
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Entry
105899707 CDS
T09045
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105899707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105899707
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
105899707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Motif
Other DBs
NCBI-GeneID:
105899707
NCBI-ProteinID:
XP_031434889
Ensembl:
ENSCHAG00000022517
UniProt:
A0A6P8G6B0
LinkDB
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Position
13:complement(28169490..28564963)
Genome browser
AA seq
1267 aa
AA seq
DB search
MVLKMRHGAHLICMGLVLCCVVDLGASLEFTGAEGQWATFPMWNACCESEMNFNMKTKSS
HGLLVYFDDEGFCDFLELLIHNGKLSLRFSIFCADPATVVTDTAVNDSQWHSVTIRRSFK
NTTLIVDKEVKWVEVKSKRRDMTVFSHLFLGGIPPELKSQALRLTSSVVKDQVPFAGWIT
DLRVNNTEPILVNSAGVNNDLCGTDVLCLNGGVCSVVNNEPTCDCSDTGYQGKDCSEEDN
YVEGLAHLMMGDQGKNRGKEEYVATFKGSEYFCYDLSLNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRMAKQGDPKMKVHGVVAFKCENVATLDPITFETPESFITLDKWNAKK
TGSISFDFRTTEPNGLLLFSHGKPKQPIKGAKNPQSLRVDFFAIEMLEGHLYLLLDMGSG
TTKTRALNKKVNDGEWYHVDFQRDGRSGTISINTVRTAYTAPGESEILDLDDNLYLGGLP
ENKMGMVFPTEVWTALLNYGYVGCIRDLFVDGQSKDVRRIAETQKATGVKPSCSKEAPKL
CLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDGSKFMKIQLPVVMHTEA
EDVSLRFRSQRAYGILMATTSRDSGDTLRLELNTGRIQLTVNLDCDRINCTSSKGPETLT
AGQNVNDNEWHTVRVMRRGKSLMLSVDDLPPAEGQMAGQHTQLEFHNIETGILTEKRFVS
LPPSNFIGHLQSLMFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPVTFKSRSSYVALS
TLQAYYNMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGNS
NKPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTSGAKNLDLKGDLYVGGVAKEMYKEL
PKLVHAKEGFQGCLASMDLNGRLPDLLSDALACVGTIERGCEGPSTTCQEDSCANQGVCL
QQWEGFTCDCSMTSYGGPLCSDAGTTYIFGRGGGLITYTWPPNDRPSTRADRLALGFSTQ
QKESVLVRVDSSTGLGDYLKLHIDKGNIAVVFNVGTDDIYIEEKAKFVNDGKYHIVRFTR
SGGNATLQVDDLPIIERYPTGNIDNERLAIARQRIPYRLGRVVDEWLLDKGKTLIKTLNK
NNLNITK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttaaaatgcggcatggtgcccatctaatatgtatgggtttggttctgtgttgt
gtggtggacctcggggctagcctggagttcactggtgctgagggacagtgggccaccttt
cccatgtggaatgcgtgttgcgaaagcgaaatgaacttcaatatgaagaccaagagctcc
cacggactcctggtgtattttgacgacgaaggcttttgcgactttctggagctactcatc
cacaacggcaaactcagtctgcggttctccatattttgtgccgacccagcaacggttgtt
actgacacagcagtgaacgacagccagtggcatagtgtcaccataaggagaagcttcaaa
aacaccacactcatcgtggacaaagaggtcaaatgggtggaggtcaaatccaaaaggcgc
gacatgacggtgtttagccatttatttcttggtggaatcccaccggaattaaagtcccaa
gcattgaggctaacgtcatcggtcgtgaaggaccaagttccgtttgctggatggataaca
gacttgagagtgaacaacactgaaccgatactcgtcaacagtgcaggggtcaacaatgac
ctttgtggcacagacgtcttgtgtctgaacggaggagtgtgtagtgttgtcaacaacgag
ccgacctgtgactgctcagacactgggtatcaaggaaaagactgcagtgaagaagacaac
tatgttgaaggtcttgcgcacctgatgatgggcgaccaaggtaaaaacagaggaaaagaa
gaatacgtcgcaaccttcaaaggatccgaatacttctgctacgacctgtccctgaacccc
attcagagcagcagcgacgagatcacgctctcgttcaagaccctgcagagaaacggactg
atgctgcacacgggcaaatcggccgactacgtcaatctggcgttgaaaaacggggcggtc
tcgctcgtcattaatttgggttccggggcctttgaagcgttggtggagcccgtcaatggg
aaatttaatgacaatgattggcatgatgtgaaggttacaaggaatctccgtcagcattca
ggcattggacacgctatggtgacaatatccgtggatgggattctgacgaccactggatac
acgcaagaggactacaccatgctcggctccgacgatttcttctatgtgggcggcagtccc
agcaccgccgacctgcctggatcgcccgttagcaacaactttatgggttgcctgaaggag
gtcgtgtacaaaaacaacgatgtgcgtctggagctctccaggatggcaaagcaaggggac
cccaagatgaaggtccacggcgtggtggccttcaagtgcgagaacgtggcgaccctcgac
cccatcaccttcgaaacgccagagtccttcatcaccctggacaagtggaacgccaagaag
acgggctcgatctcgttcgacttccgcaccaccgagcccaacgggctgctgctcttcagc
cacgggaagcccaagcagcccatcaaaggggccaagaacccgcagtcgctcagggtggac
ttcttcgccatcgagatgctggagggccacctgtacctcctgctggacatgggctcgggc
actaccaagacacgcgccctcaacaagaaggtcaacgacggggagtggtaccacgtggac
ttccagagggacggaagatcaggcaccatctccatcaacaccgtccgaacggcatacacc
gctcccggggagagcgagatcctggacctggacgacaacctgtacctgggcgggctcccc
gagaacaagatgggcatggtcttccccacggaggtgtggacggcgcttctcaactacggc
tacgtgggctgcatccgcgacctcttcgtggacggacagagcaaggacgtgcggcgcatc
gccgagacgcagaaggccacgggcgtcaagccctcctgcagcaaggaggcgccgaagctg
tgcctgagcaacccgtgccagaacaacggcgtgtgccgagagggctggaaccgctacgtg
tgcgactgctccgggaccggctacctgggccgctcctgcgagagagaggccaccatcttg
agctacgacggcagcaagttcatgaagatccagttgccggtggtgatgcacacggaggcg
gaggacgtgtccctgcgcttccgctcccagagggcgtacggcatcctgatggccaccacg
tcacgtgactccggcgacacgctgaggctggagctgaacacgggccgcattcaactcacc
gtcaacctagactgtgacaggataaactgtacctctagcaaaggtcccgagactctgaca
gcgggtcagaatgtgaacgataacgagtggcacacggtgcgcgtgatgcgcagaggaaag
tctttgatgctgtcagtggatgatttgcctcccgcagaaggccaaatggccgggcaacac
acacagctggagttccacaacatcgagacgggcatcctgacggagaagcgcttcgtctcg
ctgccgccctccaacttcatcggccacctgcagagcctcatgttcaacggcatggcctac
atcgacctgtgcaagaacggcgacatcgactactgcgagctcaacgccatgatcggcttc
aagaacatcatcgccgaccccgtgaccttcaagtcgcgctccagctacgtggcgctgtcc
acactgcaggcgtactacaacatgcacctcttcttccagttcaagaccacgtcgtccgac
ggcctcatcctcttcaacagcggcgacggcaacgacttcatcgtagtggagctggtcaag
ggatacctgcactatgtgtccgacctggggaacggagctcatctcatcaaggggaactcc
aacaagccgctcaacgacaaccactggcacaacgtcatgatctcccgcgacaccaacaac
ctgcacacggtcaagatcgacaccaagatcaccacccagaccacctctggagccaagaac
ctcgatctgaaaggtgacttgtacgtgggcggcgtcgccaaggagatgtacaaggagctg
cccaagctggtccacgccaaggagggcttccagggttgcctggcttccatggatctgaac
gggcggctccccgacctcctgtccgacgcgctggcctgcgtaggcaccatcgagaggggc
tgcgaaggccccagcaccacgtgccaggaggactcgtgtgccaaccagggggtgtgtctt
cagcagtgggagggattcacctgtgactgcagcatgacgtcgtacgggggaccactctgc
agcgacgcgggaactacgtacatattcgggcggggtggcggtctcatcacgtacacgtgg
ccgccgaacgaccgtccgagcacgcgagcggaccggctggccctgggcttcagcacgcag
cagaaagagtccgtgctggtgagggtggacagctccacagggctcggggactacctgaag
cttcacatcgataaagggaatatcgccgtagtgttcaatgtgggaacggatgacatttac
atcgaggagaaggcaaagtttgtaaatgatggaaagtaccatattgtgaggtttacacgg
agtggcggtaatgccacactgcaggtggatgacctgccaatcattgagcgataccccaca
ggcaacattgataacgaacgcctggcgattgctagacagcgaatcccatatcgacttggt
cgagtagttgacgaatggctactcgacaaaggtaaaacattgattaaaactttaaataaa
aataatctgaacataacaaagtaa
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