Clupea harengus (Atlantic herring): 105899784
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Entry
105899784 CDS
T09045
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105899784 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105899784 (fhod1)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
105899784 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
105899784
NCBI-ProteinID:
XP_031425075
Ensembl:
ENSCHAG00000013415
UniProt:
A0A6P8FNR5
LinkDB
All DBs
Position
6:complement(17286853..17329047)
Genome browser
AA seq
1405 aa
AA seq
DB search
MATITCRVQYLEDTDPFVCTNFPEPRRPPPYNFYENSPLSEQIAGVHKLLEAPLKLEECA
LQVAPNGNYLDLELSLTEQRDDLEHLFEDLEKGKKPILILRTQLSVRVHSILEKLYNSHG
PELRRSLFSLKQLFQDDKDLVPEFVNSDGLTCFIKVGAEADQNYQNYILRALSQIMLFVD
GMNGVINHNETVQWLYILSGSLSRLVVKTSLKLLIVFVEYTEANCPLLIQAVNTVDAKRG
VKPWKYLIEILDEKNGSDTELLVYTMSLINKTLAALPDQDSFYDVADCLEQQGMENIMHK
HMNTKGTEADLKQQFTIYENALKSEDGELEESSPHIRKERRKGAASEQEGRRSRRSSANF
PEVPHSSSPASPVSPTSSTSPFSSSSQSRTTSPQPSEPCSPLPLSTPTSSCSSQRSSPVP
LPVAANGTASPQQEQEQRAFPTQGRSFVSQYMSSMGISRRSRLLNKAGSITEEPSAASNS
ESPTDTAPQENHSQTTTEQPIKTESRNVFKLHQADSVCSEGCDVSKDRPVLMNYQDTFLR
SLAATHRDRDRKRRSAVAKERRASRDQSSPGPAEGDVCSPTEPSPSSPTEGTSGSGGSEP
LSANSTEAPSTPSTLEQSGDAQSTHNEAGGTVQRQGSVAEQHNTLSNDRKFMLDMLYSKN
SSGGGTALKSPGLSEGSAETEAGLEHLGITSLAGRLSSLQSRQAQPTEDQSRRAELEGLG
GSAQAARARLAEEQQHRRVRPQYSIDAETHARSLEKTQMTPLPRDSQDAWDQLQPSSRAL
RIKDLDFSDLKEEEDIDVLDMDAFDSGLSNGIPPPPPPMPGLGAAPPPPPPPPGPPGMAS
PPPPPPPPPCGGPPPPPPPPGMPPPAPLHATDPVFAKKRKTVKLFWKELKQPDSPRKCLF
GYGTVWASLDKVTVDTAKLEHLFESKAKELPVAKKGPETKRSEILVLDPKRSNAINIGMT
VLPAINVIKTAILNFDEFAINKEGIEKILTMTPTEEEKQKIQEAQLANPDVPLGTAEQFL
LTLSSISGLTARLQLWAFKLNYETLEKEIAEPLFDLKLGMEQLAKNKTFKRILATLLAVG
NFLNSTSAKGFELNYLEKVTEVKDTVHRQTLLHHTCNFVVENFPDTSDVYSEVPAITRSA
KVDFEQLSDNLVQLERKCKNSWDNLKVVAKHETKPLLKNKMTEFLKDCTERIIILKVVHR
RIINRFHSFLLYLGQPSYSVRDTKVTLFCKIISEFSLEYRTTRERVLTQKRKRAAHRERT
KTRGKMITETEKFSGAVSPQTQDSPSPVSTVTDSEPAEEDHENMKNLLIANDNNHKLRRS
RGIRGLERVSPSAKEDSASSQDDATDEIMDRLVKSVTQNPSERASSPKTRKRSRLNRKSL
RRTLKSGLSLDVVQALGLHKANEKV
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggccacgataacatgtcgagtgcagtacctggaggatacggacccattcgtttgcaca
aactttcctgagccacgaagacctccgccatacaacttctatgaaaatagccctcttagc
gaacaaattgccggagttcacaagctgttggaggcaccattgaagttggaggaatgtgcc
ctgcaggtggctcccaatggaaactacctggacctggagttatctctgacagaacagagg
gacgacctagagcatcttttcgaggacctggagaaaggaaaaaagcccatcttgattctg
cgcactcagctgtctgtgagagtccactccatcctagagaagctgtacaactcccatggc
cctgagctccggcgctccctgttctccttaaagcagctgttccaggatgacaaagacctg
gtgccagagtttgtgaattcagatgggctcacctgtttcatcaaagtaggggcagaggcc
gaccagaactaccagaactacattctcagagccctgagccaaatcatgctgtttgtggac
gggatgaacggcgtcatcaaccacaatgagactgtgcagtggctctacatcctcagtggc
agcctgtctcggctggtggtgaaaacctctctgaagctgcttatcgtgtttgttgagtac
acagaagccaactgcccactgctcattcaggctgtcaacactgtggatgccaaaagaggg
gtgaagccatggaagtatctgatagagatcctggatgagaagaatggctccgacacggaa
ctccttgtgtacaccatgtctctcataaataagactctcgcagctctgccagaccaggat
tccttctatgacgttgcagactgtctagaacagcaggggatggagaacatcatgcacaag
cacatgaataccaaggggaccgaagcagacctcaagcagcagttcactatatacgagaat
gcgctgaagtccgaggatggggagctcgaggagtcctccccacacatccgcaaggagcgc
cgcaagggggcagccagcgagcaggagggcaggaggagccggaggtcctcggccaacttc
cccgaagtgcctcactcttcctccccggcctccccagtctcccccacctcctccaccagc
ccgttctcctcctcctcccagagccgcaccacctccccccagccctccgagccctgcagc
cccctgcccctttccactcccacctcaagctgcagctcccagagatcctcccctgtgccg
ctccctgtggcagccaacggtactgcatccccccaacaggagcaggagcagcgggccttt
cccactcaggggcgatctttcgtcagtcagtacatgtcgtctatggggatttctaggagg
tcaaggttgttaaacaaggctgggtcaataacagaggagccctcagcagcctctaacagt
gagtctcccacagacactgctccacaggagaaccattcccagacgaccacagagcagccg
atcaagacggagagcaggaacgtctttaaactgcaccaagccgacagtgtttgctcggag
ggttgcgacgtatctaaggaccgtccggttcttatgaactatcaagacaccttcctgcgc
agcctggctgccactcacagggaccgggacaggaagaggaggtctgccgtggccaaggag
cgccgggcgtccagggaccagagcagccctggccccgctgagggcgacgtgtgctcccct
actgagccgagccccagctcacccactgaagggacgtcagggtctggtggatcggagccc
ctttcggcgaactccacagaagccccgtctactcccagcaccctggagcagtcaggagac
gcgcagtcgacccataatgaagcaggtggcactgttcagcgacagggcagtgttgccgag
cagcacaacaccctctccaatgacaggaagttcatgctggacatgctctatagcaaaaac
agcagcggcggggggacagcgctgaagagcccgggtctgagcgagggctcggcggagacg
gaagccggcctggagcacctgggcatcaccagcctggccggccgcctctccagcctgcag
tcgcgccaggcccagcccaccgaggaccagtcccgcagggcggagctggagggcctgggg
ggcagcgcacaggcggcgcgcgcccggctggcagaggagcagcagcaccggagggtgcgc
ccccagtacagcatcgacgcggagacccacgcgcgcagcctggagaagacccagatgacg
ccgctgccccgcgacagccaggacgcctgggaccagctccagccaagctcccgggccctg
cgcatcaaggacctggacttctccgacctcaaggaagaggaggacatcgacgtgctggac
atggacgcgtttgactcgggcttgtccaatggaatcccccctcctccacctcctatgccg
ggtctgggtgctgctccaccgccacctcctcccccgcccggcccacctgggatggcctct
cctccacccccaccccctcctcctccatgtgggggtccacctcccccacctcctccacca
ggcatgccccctccagcccccttgcacgcgacagacccagtcttcgctaagaagaggaaa
acggtgaagctgttctggaaggagctgaagcagccggacagtcccaggaagtgcctcttt
ggctacggcacggtgtgggcatctctagacaaggtcacggttgataccgccaagctggag
cacctgtttgagtccaaagctaaggagttacccgtcgccaagaaaggacctgagacaaag
aggtcagaaatcctcgttctggatcctaagaggagtaatgccatcaacataggcatgact
gtccttcctgccatcaatgtcatcaaaactgccattctcaactttgacgagtttgccatc
aacaaagagggaattgagaaaatactcacaatgacgccgaccgaagaggagaagcagaag
atccaggaggctcagctggccaatccagacgtgcccttggggacggccgagcagttcctg
ctaacgctgtcctccatcagcggccttacagcgcgccttcagctctgggccttcaagctc
aactacgagactctggagaaggagattgcagagccgctgtttgacctgaagctaggcatg
gagcagcttgccaagaacaaaacattcaaacgcatcctggcaaccctcctggccgtcggc
aacttcctcaacagcaccagcgctaaagggtttgaactgaattacctggagaaggtgact
gaggtgaaggacacggtgcacaggcagaccctcctgcaccacacctgcaactttgtggtg
gagaatttccccgacacgtcagacgtgtactctgaggtccctgccatcacacgatctgcc
aaagtggactttgagcagctgtctgacaacctggtgcagttggagaggaagtgcaagaac
tcctgggacaatctgaaggtggtggccaaacatgagaccaagccactgctcaagaacaaa
atgaccgagtttctgaaggactgcaccgagaggatcattatccttaaggtggtgcatcgg
cgcatcatcaacaggttccactccttcttgctctaccttggccagccatcttactctgtg
cgagacacaaaggtcaccctgttctgcaagattatcagtgagttctcccttgagtaccgc
accactcgagagagggttctgacccagaaacgaaagcgggctgcccaccgggaacgaaca
aagacccgagggaaaatgattactgagactgagaagttctctggagccgtttcaccacag
acccaagatagcccttctcccgtctctacggtaacagattctgaacctgctgaggaggat
catgagaacatgaagaacttgctcatagccaacgacaacaaccacaaactcagaagatca
cgtggaattagaggcttggaaagggtcagtccatcagccaaagaggacagtgctagttcc
caggacgatgccacagatgagatcatggatcgcttggttaagtctgttacacagaatccg
tctgaaagagcatccagtcccaaaacacgcaaacgttcccgactgaaccggaagtcattg
cggaggacactcaagagtggcctgagtcttgacgtggtgcaggctctgggactccacaaa
gccaacgagaaggtctga
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