Clupea harengus (Atlantic herring): 105899884
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Entry
105899884 CDS
T09045
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
char01100
Metabolic pathways
Module
char_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105899884 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
105899884 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105899884 (xylt1)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
105899884 (xylt1)
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
Glycosaminoglycan
105899884 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
105899884
NCBI-ProteinID:
XP_031421438
Ensembl:
ENSCHAG00000020273
UniProt:
A0A6P8EYX6
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Position
1:complement(5691942..5781526)
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AA seq
955 aa
AA seq
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MVGSLCARKLARRSRSALIAALTVLLIQTLIVWNFSSLDTGEDREDDGNGREKRDRIGIN
KAYSEYPKSGFPRRHHQPPLGKAPVRHKQQPDGYHSHRPKEKVRVDSNNENSVPKDFETI
DNSNFGARAQTQSQRHTTGGAGGGAGSNKRKQLMLERAHAQQSQAKGSNEVIQYGQKYGI
TAAGNGGRNHTSATHYATGGGAAAAGQRTARPVPGHTPAQPHRHHRPQAQARRTVAPPLA
ELHYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGKLMPEKVTRFCPIEGKG
NVNVQWEEDSVESAPAVPVRIAFMLVVHGRASRQIQRLFKAIYHTSHFYYIHVDQRSNFL
HREMVALASQFPNVRITTWRMSTIWGGASLLTMYLRAMADLLAMKDWPWDFFINLSAADY
PIRTNDQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGV
SVDGGSDWFLMNRVFVDYVINTQDDLVSSMKRFYAYTLLPAESFFHTVLENSPHCENMVD
NNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQTTRPTFFARKFEASVNQE
IVNQLDAFLFGGLPQGTPGMRAYWENIFDEPDSVRSLTDTQLTYYHAFARMGLARATSSL
QGSPGDNSCRYVAMGSPVSVHLYFLSDEFQGYLVRHHGTNLATSKLETLETWVMPRKFFK
FSNPPNSFTRLQSAEIGSDWDAKERLFRNFGNLMGPSEEPVGMQRWGKGPNITATVVWVD
PTNVIAATYDILVDAGSEFTHYRPPLNGPLRPGMWTLRVLHHWNPVAETRFLIAPLTHHK
HQPIRKEDALKLHNGPAKNSYMEQSFHGLNPILNIPVHLGQVEAAEQHAGLTGAELERWA
DGLVAEVWSAVDVCSAGPSPSGCPVLQACRDTPWSSLSPDPKSRVGPTGANGRVR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcagtttgtgtgcccgtaagttggctcggcgatcacggtctgcgttaatagcg
gcacttactgtgctactaatccagacacttatcgtatggaacttcagtagcctggacacg
ggggaagacagggaagacgatggcaacggcagagagaagcgagaccgaatcggtatcaac
aaagcctacagcgagtatccgaaaagcggcttcccgagaagacatcatcagccaccactg
ggaaaggcacccgttcggcataagcagcaaccggatggctatcactcccatcggccgaag
gagaaagtgcgggtggacagcaacaacgagaactccgtgcccaaagacttcgagaccatc
gacaacagtaacttcggggcgcgggcacagacgcagagccagcggcacactacagggggc
gccggcggcggggcgggcagcaacaaacgcaagcagctaatgctggagagggcgcacgcc
caacagagccaggccaagggctccaacgaggtcatccagtacggccagaagtacggcata
accgccgctggcaatggcgggcgcaaccacaccagcgcgactcactacgccaccggagga
ggcgccgctgccgccgggcaacgcacagccaggcccgttccaggacacactccggcccag
cctcaccggcaccaccggccccaggcccaggcgaggcgcacggtggcgcccccgctggcc
gaactgcactacgaccagccccccaagtgcgagatcagcggcaaggaggccatctcggcg
ctgtcgcgcgccaagaccaaagagtgccggcagcagatcgccgaggtctactgtcgccac
aaggagggcaagctcatgcccgagaaggtcacccgcttctgccccattgagggcaagggc
aacgtgaacgtgcagtgggaggaggattcggtggagagcgccccggctgtgccagtgagg
atcgccttcatgctggtggttcacgggcgggcctcgcggcagatccagcgtctcttcaag
gccatctaccacacctcacacttctactacatccacgtggaccagcgctccaacttcctg
cacagagagatggtggcgctggccagccagttccccaacgtgcgcatcactacctggcgc
atgtccaccatctggggcggcgccagcctgctcaccatgtacctgcgggccatggcggac
ctgctggccatgaaggactggccctgggacttcttcatcaacctcagcgctgccgattac
cccatcaggaccaatgatcagctggtggccttcctgtcaaagtaccgtgacatgaacttt
atcaagtcccatggaagagacaatgcacgcttcatcagaaagcagggcctggacagactg
ttcttcgagtgcgacactcacatgtggcgcctgggtgaccggaagattccggaaggcgtc
tcagtggatggcggctccgactggttcctgatgaaccgcgtgttcgtggactacgtcatc
aacactcaggacgacttggtctccagcatgaagcgcttctacgcctacacactcctacct
gccgagtcgttcttccacacggtgctggagaacagtccccactgtgagaacatggtggac
aacaacctgcgcatcaccaactggaaccgcaagcttggctgcaagtgccagtacaagcac
atcgtggactggtgcggctgctcccccaacgacttcaagccctccgatctgccacgcttc
cagcaaaccacgcggcccaccttcttcgcccgcaagttcgaggccagcgtcaaccaggag
atcgtcaaccagctggacgccttcctgttcgggggcctcccccaggggacgccgggcatg
cgcgcctactgggagaacatcttcgacgagcccgacagcgtgcggagcctgacggacacg
cagctcacgtactaccacgctttcgcccgcatgggcctggcccgcgctaccagctccctg
cagggcagccccggggacaacagctgcaggtacgttgccatggggagcccagtgtctgtc
cacctgtacttcctttcggatgagtttcagggttacctggtacggcaccacggcaccaac
ctggcaaccagcaagctggagaccctggaaacgtgggtgatgcccaggaagttctttaag
ttctccaaccctcccaacagcttcactcggctccagtcggcagagatcggatcggactgg
gatgctaaggagcgactgttccggaactttggcaacctgatggggccgtcggaagagccc
gtgggtatgcagcgctgggggaaggggcccaacatcacggcgacggtcgtgtgggtcgac
cccaccaacgtgatcgcggccacctacgacatcctggtggacgcggggtcagagttcacg
cactaccggccgcccctgaacgggccgctgcggccgggcatgtggaccctgcgtgtgctg
caccactggaaccccgtggccgagacgcgcttcctcatcgcaccgctcacacaccacaaa
caccagcccatacgcaaggaggacgccttgaagctgcacaacgggccggccaagaacagc
tacatggagcagagcttccacggtctcaaccccatcctcaacatcccggtgcacctgggc
caggtggaggcggcggagcagcacgcgggcctgacgggggccgagctggagcgctgggcg
gacgggctggtggccgaggtgtggtcggccgtggacgtgtgcagcgcgggccccagcccc
agcggatgccccgtgctgcaggcctgccgcgacacgccctggagctccctcagccccgac
cccaagtcccgcgtggggcccaccggggccaacggccgcgtcaggtag
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