Clupea harengus (Atlantic herring): 105899928
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Entry
105899928 CDS
T09045
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105899928 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105899928 (llgl1)
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105899928 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_Prp19
Lgl_C
WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105899928
NCBI-ProteinID:
XP_031421954
Ensembl:
ENSCHAG00000025151
UniProt:
A0A6P8F9J8
LinkDB
All DBs
Position
1:7400064..7438910
Genome browser
AA seq
1043 aa
AA seq
DB search
MMKFRFRRQGNDPQREKIKQDLFAFNKTVEHGFPNQPSALAYDPKLQLMAIGTKSGAIKV
YGAPGVEFTGLHKDCATVTQIHFLYGQGRILSLLDDNTLHLWEVFQKDGYSHLEEVREFT
LPGRPGIESASASRVTVLLLTPTCDLLCMGTEGGGVHFVELPSLTLLDKSLLQEEVLQSV
PEDYKHGKSLGPVESLQEHPQQPDKILIGYSRGLVVLWDMDSRHADNVFLGKQQLESLVW
ERTGSTFVSSHSDGGYMVWAVNNSTPFSSQPVTSTIPYGPFPCKAVNKILWRTTELGAPL
VLFSGGMPRASYGDRHCLTILQDSTHVTLDFTSRVIDFFTIHCTDPLKEFDDPTALVVLL
EEELVVIDLVTHGWPTIPSPYLAPLHSSAITCSYHISNVPVRLWERIISAGQQQQSPQLT
HVNWPICGGKSLATEPKHMELLLTGHEDGTVRFWDASGVSLKPLYKLSTANIFQTDCDHS
DSMTQAGEEEWPPFKKVGCFDPYSDDPRLGIQKMCLCKYSGKLVVAGTAGQVIVMYLSDE
KSDHMIDVATVDLLQDREGFTWKGHDRLPPKTGSVVFAPGFQPVVLAQCIPPASVTAVTL
HAEWNLIAFGTSHGFGLFDYHRRSPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRR
IRKSRVSGKKRVVVNSPTSKVQEANAQLAEQDEVAPVQRRIEPRSADDSLSGVVRCLCFA
DTYLRDGTHHGPTMWAGTNSGSVYAYALDVPPQERFSEQSVEALLGKEIQLMHRAPVVSI
AVLDGRGNPLPEPYEVSRDLAKAPDMQGSHSVLIASEEQFKVFMLPKVSAKTKFKLTAHE
GCRVRKVGLANYASTASDDYSENGLVCLTNLGDIHVFSVPALRPQVRYDCIRKEDISGIA
SCVFTKTGQGFYLISPSEYERFSLSARVITEPLCQVEVDRPHDPTALSDSTTSPPHANGT
HKKQTTGEHKSVAEAEGMVDELQNALHSTTLDSPNSSADITMDTTGELTVEDVKDFLVTV
DEAENNRRNITEEDARSPGILIN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggttcaggaggcaggggaacgacccccagagagagaaaatcaaacag
gacctctttgcattcaataagactgtcgaacatggattccctaaccaacccagcgccttg
gcttatgatccaaagctgcagcttatggccattggcaccaaatctggagccatcaaagtc
tatggagcccctggagtggaattcaccggccttcacaaagactgcgccacggtcacgcag
atccacttcctctacggacaaggccggatcctctcgctgctggatgataacaccctgcac
ctgtgggaggtcttccagaaggatggctactctcacctggaagaggtccgcgagttcacc
ctcccgggcagaccagggatcgagagcgccagtgcgagccgtgtgaccgtgctcctgctc
acgccgacctgtgacctgctgtgcatgggtaccgagggaggcggcgtccatttcgtggag
ctgcccagcctcaccctgctggacaagtcgctgcttcaggaggaggtgctgcagagcgtt
cctgaggactacaaacacgggaagtcgctgggaccggtggagtccctgcaggagcatcct
cagcagccggacaagatcctcatcggatacagcaggggcctggtggtcctgtgggacatg
gactcgcggcacgccgacaacgtcttcctgggaaagcagcagctggagagcttggtgtgg
gaacgaactggaagtaccttcgttagctcccatagcgacggtggctacatggtgtgggca
gtcaacaacagcacccctttctccagtcagccagtcacgtccactatcccctatggtcca
tttccctgtaaagctgtgaacaagatcctctggagaacgacagaattgggggctcctctg
gtgctcttcagcggcggcatgccccgggcgagctacggagaccgccactgtttgaccatc
ctgcaggacagcacgcacgtcaccctggacttcacctccagggtcattgacttcttcacc
atccactgcacagatcccctaaaggagtttgatgaccccacagcccttgtggttcttctg
gaagaggagctggttgttattgacctcgtgacccacggctggccgacgatcccctctccg
tacctggccccactgcactcttcggccatcacctgctcctaccacatctccaacgtcccc
gtcaggctgtgggagaggatcatcagcgccgggcagcagcagcagagcccccagctgaca
catgtgaactggccaatatgtggaggcaagagcctggcgactgaaccgaaacacatggag
ttgctactgacgggtcatgaggatggcactgtgcgtttctgggacgcctccggcgtgtcc
cttaagcccctctacaagctgagcacggccaacatcttccagacggactgcgaccacagc
gacagcatgactcaggcgggggaggaggagtggccccctttcaagaaggtgggctgtttt
gacccctacagtgatgaccccaggctgggcatccagaagatgtgcttgtgtaaatacagt
ggcaaactagtggtggcaggaactgctggacaggtgattgtgatgtacttgagcgatgag
aagtcggatcacatgatcgacgtggccacagtggacctcctgcaggaccgcgagggcttc
acgtggaaaggtcacgaccggctgcctcccaagacgggctccgtggtgtttgcccccggg
ttccagcccgttgtcttggcgcagtgcattccccccgcctccgtcaccgcggtaacgcta
cacgccgagtggaacctcatcgcctttggcaccagccacggcttcggcctcttcgactac
caccgccgcagccctgtgctggcaagatgcacgcttcaccccaacgactccctggctatg
gaggggcccctgtcacgggtgaaatctctgaagaagtcgctgcgtcagtccttcagaagg
atccggaagagccgagtctcggggaaaaaacgtgtggttgtcaacagtcccaccagtaaa
gtccaggaggcgaacgcacagctggcggagcaggatgaggtggccccggtgcagaggagg
attgagccgcgctccgccgacgactcgctctcaggggtggtgcgctgcctctgcttcgcc
gacacatacctcagagatggaactcaccatggtcctactatgtgggctggcacaaactct
ggctcggtctacgcgtatgcactggatgtgcccccgcaggagcgcttctccgagcagagc
gtggaggccctgctggggaaggagatccagctgatgcaccgggcgcccgtggtctccatc
gccgtgttggacggccgggggaaccctctgcccgaaccctacgaggtctccagagacctg
gccaaggccccagacatgcagggcagccactcggtgctcatcgcctcggaggagcagttc
aaggtgttcatgctgccaaaggtgagcgctaagaccaagttcaagctgactgcccatgag
ggttgtcgggtgaggaaggtggggctggcgaactatgccagcacggcgtccgatgactac
tccgagaacggcctggtgtgcctgaccaacctgggcgacatccacgtgttcagcgtgccg
gcgttacggccgcaggtgcgctacgactgcatccgcaaggaggacatcagcggcatcgcc
tcctgcgtgttcaccaagaccggccagggattctacctgatctcgccctcagagtatgag
cgtttctcgttgtctgcacgggtgatcaccgaaccgctgtgccaggtggaggtggaccgg
cctcatgaccccactgccctcagtgacagcacaacttccccacctcacgcgaacggcact
cataagaagcagaccactggagaacacaagtccgtagcagaagccgaaggaatggtggat
gaactgcagaatgccctgcactcgaccacgctggattcccccaacagcagtgccgacatc
accatggacacgaccggagaactcactgtggaggacgtcaaggacttcttagtgaccgtt
gacgaggccgagaacaaccggaggaatatcacagaggaagacgcccggtctcctggaatc
ctcatcaactga
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