Clupea harengus (Atlantic herring): 105899955
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Entry
105899955 CDS
T09045
Symbol
usp7
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 7 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
char04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105899955 (usp7)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105899955 (usp7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899955 (usp7)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105899955 (usp7)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105899955 (usp7)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105899955 (usp7)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105899955 (usp7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Capsid_VP7
DUF7538
Motif
Other DBs
NCBI-GeneID:
105899955
NCBI-ProteinID:
XP_012682642
Ensembl:
ENSCHAG00000023609
UniProt:
A0A6P3VVV9
LinkDB
All DBs
Position
1:complement(6639588..6659706)
Genome browser
AA seq
1111 aa
AA seq
DB search
MNHHHHTQQQQQKAGEQQLSEPEDMEMEAGDTDDPPRIPQNPVINGNMAIADGHNNTEED
MEDDTSWRSEATFRFVVERFSRLSESVLSPSCFVRNLPWKIMVMPRFYPDRPHQKSVGFF
LQCNAESDSTSWSCHAQAMLKIINYKDDEKSFSRRISHLFFHKENDWGFSNFMSWSDVTD
PERGFVEDDKVTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQL
RRAVYMMPTEGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQE
LCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQLSIKGKK
NIFESFKDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTFPPILHLQLMRFMYDPQTDQN
IKINDRFEFPEQLPLDEFLQKTDAKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGKAS
VTEPIWCKFDDDVVSRCTKEEAIEHNYGGHDDDLSVRHCTNAYMLVYIRESKLSEVLLPV
TDVDIPQQLVERLQEEKRVEAQKRKERQEAHLYMQVQMVTEDQFCGHQGNDMYDEEKVKY
TVFKVLKSSTLAEFVQNLSQTMGFPQDQMRLWPMQARSNGTKRPAMLDYEADCNKSMIDL
SDNENPWTIFLETVDPEMAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISC
KIRDLLPVMCERAGFQQGTSLILYEEVKPNLTERIQDYDVSLDKALDELMDGDIIVFQKD
DPENDTSELPTAKDYFRDLYHRVDVIFCDKTIHNDPGFVVTLSNRMNYFQVAKTVAQRLN
TDPMLLQFFKSQGYRDGPGNPLRHNYEGTLRDLLQFFKPRQPKKLYYQQLKMKITDFENR
RSFKSIWLNSQFREEEITLYPDKHGCVRDLLEECKKAVELSDKGSEKLRLLEIVSYKIIG
VHQEDELLECLSPAASRTFRIEEIPLDQVDLDKETEMLIPVAHFHKEVFGTFGIPFLLKI
RQGECFRDVMRRIQTMLDIQEKEFEKFKFAIVMMGRHQYINEDEYEVNLKDFEPQPGNMS
HPRPWLGLDHFNKAPKRGRYTYLEKAIKIHN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccaccatcacactcagcaacagcagcagaaagccggcgagcaacagcttagc
gaacccgaggatatggagatggaagctggggacacagatgatccccctagaatcccccag
aaccctgtcatcaacgggaacatggccatagcagacgggcataacaacacagaggaagac
atggaggacgataccagttggcggtcagaggctaccttccgctttgttgtggagcgattc
agccggctgagtgagtctgtgctcagcccttcttgcttcgtgaggaacctgccctggaag
atcatggtgatgccacgcttctacccagacaggcctcaccagaagagtgtgggcttcttc
ctgcagtgcaatgcagagtccgattccacgtcgtggtcgtgtcatgcccaggcgatgctg
aagatcatcaactacaaagatgacgagaagtccttcagtcgccgcattagccacctcttc
ttccacaaggagaacgactggggcttctccaacttcatgtcctggagtgacgtgactgat
ccggagaggggatttgtagaggatgacaaagtcacctttgaagtctttgtgcaggcagac
gctccacatggggtggcgtgggactcaaagaagcacaccggctacgtggggctcaagaac
cagggagccacatgttacatgaacagcctgctgcagacgctgttcttcaccaaccagctc
cggagggcggtgtacatgatgccgaccgaaggggatgactcctccaaaagtgtcccgctg
gctctgcaaagggttttctatgaacttcaacacagtgacaagccagtggggacaaagaag
ctgaccaagtctttcgggtgggagacccttgacagtttcatgcagcacgatgtgcaggag
ttgtgcagagtgctgctggacaatgtggagaacaaaatgaaaggcacttgtgtggagggc
accatcccaaaactcttcagaggaaagatggtgtcctatatccagtgtaagcatgtcgat
taccggtccgagagaatagaggactactacgacattcagctcagcataaaaggaaaaaag
aacatttttgagtcgttcaaagactatgtggctgttgagcagctggacggagataacaag
tatgatgccggagagcacgggctccaggaggcagaaaaaggtgtgaagttcctcaccttc
cccccgattctgcacttgcaactgatgaggttcatgtacgacccccagaccgaccaaaac
atcaagatcaacgacaggtttgagttccctgaacagttgccactggatgagtttctccag
aagactgacgccaaggacccggccaactacatccttcacgcggtgctggtgcatagcggg
gacaaccacggcggccactatgtcgtctatctcaaccctaaaggagacggcaaagcgagt
gtcaccgagccaatatggtgtaagttcgatgacgacgtggtgtcacggtgcaccaaggag
gaggccatcgagcacaactatggcggccatgacgacgacctgtccgtgcgccactgcacc
aacgcctacatgctggtgtacatccgggagtccaagctcagtgaggtgctgctgccggtg
acagacgtggacattccccagcagctggtggagcggctgcaggaggagaagcgtgtggag
gcccagaagaggaaggagagacaagaggcgcatctctacatgcaagtgcagatggtgacc
gaggaccagttctgtggccaccagggtaacgacatgtacgacgaagagaaggtcaagtac
accgtgttcaaggtgctcaagagctccaccctggctgagtttgtccaaaacttgtcacag
accatgggcttcccacaggaccagatgaggctgtggcccatgcaggcccggagcaacggc
accaagaggcccgccatgctcgactacgaggccgactgcaacaagtctatgattgacttg
agtgacaatgaaaacccgtggacaatatttctggaaacagtagacccagagatggctgcc
agtggtgccacgttaccgaagttcgacaaagaccatgatgtcatgttgttcttgaagatg
tatgatccaaaaaccagaagcttaaattattgtggacatatctacacacctatatcctgt
aaaatacgagacttgctgcccgtcatgtgtgagagagcagggttccagcagggaactagt
cttatcctctatgaggaagttaaaccgaatttaacagaacgcatacaagactatgacgtc
tccttggacaaggctctggatgaattgatggatggagatatcattgtgttccagaaggat
gaccctgagaatgacaccagtgagcttcccacagcgaaggactacttcagagacctgtac
caccgcgtggacgtcattttctgcgacaaaaccatccacaatgaccctggctttgtcgtc
acactgtccaacagaatgaactacttccaggtggctaagactgtagcacagaggttaaac
actgaccctatgctcctgcagttcttcaagtcccaggggtacagagatggcccaggaaac
cctctcaggcacaactatgaaggcactctccgagacctgctgcagttcttcaagccccgg
cagcccaagaagctctactaccagcagctgaagatgaagatcacagacttcgagaacagg
cggagtttcaaatccatatggctcaacagtcagtttcgtgaagaggagataacactatac
cctgacaagcatggctgcgtgagggacctgttggaggaatgtaaaaaagctgtggagctc
tctgacaaaggctcggagaagctgaggctcttagaaatcgtaagctacaaaattatcggc
gttcaccaagaggacgaactgctagaatgtttatctcctgcggccagccgaacgttcaga
atagaggagatccccctggaccaggtggacctggacaaagagaccgagatgctgattcct
gttgcacatttccacaaagaagtctttgggaccttcggcattcccttcttgctgaaaatc
agacagggcgagtgcttcagagacgtcatgaggaggattcagaccatgctcgacatccaa
gagaaggagtttgagaagtttaaattcgcgattgtcatgatgggccgacatcagtacatc
aacgaggatgagtacgaggtcaacctgaaggacttcgagccgcagccaggaaacatgtca
cacccaaggccttggttaggactagaccatttcaacaaagctccaaagagaggccgctac
acatacctggaaaaagcgatcaagatccacaactga
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integrated database retrieval system
