KEGG   Clupea harengus (Atlantic herring): 105899969
Entry
105899969         CDS       T09045                                 
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
  KO
K07928  Ras-related protein Rab-40
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105899969 (rab40c)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:char04031]
    105899969 (rab40c)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Target recognizing subunit
     105899969 (rab40c)
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    105899969 (rab40c)
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf MMR_HSR1
Other DBs
NCBI-GeneID: 105899969
NCBI-ProteinID: XP_012682660
Ensembl: ENSCHAG00000020478
UniProt: A0A6P3VX58
LinkDB
Position
1:complement(5873116..5890763)
AA seq 279 aa
MTTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANAAGGSKGNSLKRTKSIRPPQSPPQNCTRNNCKIS
NT seq 840 nt   +upstreamnt  +downstreamnt
atgactacccagggaagtcctgtgaagagttacgactatctcctcaaattcctcctggtg
ggggacagcgacgttgggaagggggagattttggatagtcttcaagatggatcggctgaa
tctccatatgcatacagtagtggaatcgactacaagaccaccaccattctgctggacggc
aggagagtgaaacttgagctctgggacacatcaggccaaggccggttctgcaccatcttc
aggtcttactccagaggggcacagggcatcctgctggtgtatgacatcaccaatcgctgg
tcctttgacggaatcgaccgctggatcagagagattgatgagcacgctccgggggttccc
cgcatcctggtgggtaaccggctgcacctggccttcaagcgacaggtgcctacagagcag
gcgagggcgtatgccgagaagaacggcatgaccttctttgaagtgagccccctctgcaac
ttcaacgtcatcgagtccttcacagagttgtcgcgcatcgtactaatgagacacggcatg
gagaagttctggagacccaaccgagtgttcagtctgcaggacctgtgttgccgagcgatc
gtgtcctgcacgccggtgcacctcatcgacaagctgccgttgcccgtggcgatcaagagc
cacctgaagtccttctccatggccaacggcatgaacgcggtcatgatgcacgggcgctcc
tactcgctggccaacgccgccggcggctccaagggcaacagcctcaagcggaccaagtcc
atccggcccccacagagccccccgcagaactgcacgcgcaacaactgcaagatctcttag

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