KEGG   Clupea harengus (Atlantic herring): 105900006
Entry
105900006         CDS       T09045                                 
Symbol
flr
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X2
  KO
K19683  tetratricopeptide repeat protein 30
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105900006 (flr)
Cilium and associated proteins [BR:char03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   105900006 (flr)
SSDB
Motif
Pfam: TPR_19 TPR_2 TPR_12 TPR_1 TPR_7 ANAPC3 TPR_16 TPR_CcmH_CycH TPR_8 TPR_14 ARM_TT21_C TPR_6 ARM_TT21_2nd TPR_EMC2
Other DBs
NCBI-GeneID: 105900006
NCBI-ProteinID: XP_012682709
Ensembl: ENSCHAG00000020808
UniProt: A0A6P3VWC4
LinkDB
Position
1:complement(5914961..5926707)
AA seq 651 aa
MTLTTIKDGEYTATVYKMIKDGRYAEAIHILSNELQKQMKSRAALSLLGYCYYHIQDFTN
AAECYEQLNQLHPEVEEYKLYYAQSLYGACAFSDAMKATFLLDNPTSHTKMIKLQAAIKY
GEEEYAGAKTLVEQLPQDDPDYDVDLGCLLFKEGEYEEACKKFISSMQVLGYQPDLAYNI
ALCHYSLKQYASALKYIGEIIERGIREHPELSVGMTTEGIEVRSVGNTLVLHETALIEAF
NLKAAIEYQLKNYDASQEALTDMPPRSEQELDPVTLHNQALMNIDSKPTEGFEKLAFLLQ
QNPFPPVTFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYEFLDAMLTCQTAPEE
AFRKLDETAGKLTDQLRKAAKQVQDARHTRDDDGLKKALHDYDEVLEKYIPVLMSQAKIY
WNRENYSMVEKIFRKSVEFCNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNIL
NVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVFHLCIVNLVIGTLY
CAKGNYDFGISRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMAKHMIMLRDTVVQDCIQ
FLEHCELHGKDVPAIMEQPLEEDRMHIGKNTVTYEGRMLKALFYEVIGWNQ
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgacgcttacaacgataaaagacggagagtacactgcaacagtctacaaaatgattaaa
gacgggcgttatgcagaagccatccacatcctaagcaacgaactgcaaaaacagatgaaa
tcaagggctgcgctgtcactcctgggttactgctactaccacattcaggacttcaccaat
gctgcagaatgctatgagcagctgaatcagctacaccccgaggtggaggagtacaaactc
tactatgcacagtcactctatggggcatgtgccttttctgatgccatgaaagctacgttt
cttctggacaacccaaccagtcataccaaaatgattaaactgcaagctgccataaaatat
ggagaagaggagtatgctggagccaagaccttagtggagcagttgcctcaggatgatcct
gattacgacgtggatcttggctgcttgcttttcaaagagggagaatatgaagaagcctgc
aagaagttcatatcatccatgcaagtgctgggctaccagccagatctggcatataacatt
gccctctgccactatagtttaaaacaatacgcatcagctctcaaatacattggtgagatc
atagaacgtggaatacgagaacatccagaactcagtgttggcatgacaaccgagggtata
gaggtgagaagcgttggcaacactctggtcctgcatgaaactgccctgattgaggctttt
aacctgaaggcggctattgagtaccagctcaagaactatgatgcctctcaagaggccttg
actgatatgcctccaagatcagaacaggagctggatccagtaaccctccacaaccaggcc
ctgatgaacattgactcgaagcccacggagggctttgagaagctggccttcctcttacag
cagaaccccttccctccagtcacgtttggcaacctgctgctcctctattgtaaatacgag
tactttgacttggctgcagatgttctggccgaaaacgcccatctgacgtacaagtttctg
acgccgtatctctatgagtttctagatgccatgctcacatgccagactgctccagaggag
gctttccgaaaattagatgaaacagcaggaaaattaactgaccagttaaggaaagcagcc
aaacaggtccaagacgcacggcacacgcgggatgatgacgggttgaagaaggccctgcat
gactacgatgaggtgctggagaagtacattccggtactcatgtctcaggcaaagatctac
tggaacagggagaactacagcatggtggagaagatcttccgcaagtcggtggagttctgc
aatgagcacgacacgtggaaactgaacgtggctcatgtgctcttcatgcaggagaacaag
tacaaagaggccattggtttctatgagcccatcgtcaagaagcactatgacaatattctc
aatgtcagcgcagtagtcttggctaacctctgtgtgtcgtacatcatgaccagtcagaac
gaggaggctgaagaactgatgagaaagatcgagaaagaggaggagcagatatcttatgac
gacccggacaagaaggtgtttcatctgtgtattgtaaaccttgtgattggaacgttatac
tgtgccaaagggaattatgattttggcatttcacgtgtcatcaagagcctggagccatac
aacaaaaagctcggaactgacacatggttctacgcaaagaggtgcttcctgtcgctgctg
gagaacatggccaagcacatgatcatgctccgggacactgtggtgcaagactgcattcag
ttccttgagcactgtgaactccatgggaaggacgtgccagccatcatggagcagcccctg
gaggaggaccgcatgcacattggcaagaacaccgtcacctacgagggccgtatgctcaag
gccctcttctatgaagtcattggctggaaccaataa

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