Clupea harengus (Atlantic herring): 105900009
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Entry
105900009 CDS
T09045
Symbol
cog1
Name
(RefSeq) conserved oligomeric Golgi complex subunit 1 isoform X1
KO
K20288
conserved oligomeric Golgi complex subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105900009 (cog1)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
105900009 (cog1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Dor1
Vps54_N
Dna2
Motif
Other DBs
NCBI-GeneID:
105900009
NCBI-ProteinID:
XP_012682712
Ensembl:
ENSCHAG00000011609
UniProt:
A0A6P3VVZ6
LinkDB
All DBs
Position
1:complement(5285624..5302021)
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AA seq
1015 aa
AA seq
DB search
MMAVVPAQSLRVSEIKDPTVLFERYNTEEIRTIERRVRGGIEQKKEELRQMVGERYRDLI
DAADTIGEMRQCSESVVKSIQNMYSFCNKLKQTKTSLQINSKEESQKQSQEKFYTMAAHI
KLLLEIPERIWSAMESSQYLQATQLYLLCCHLNSQLHLEGGGPHYSPVLTRFPILVRQVA
ALGHFRSTILLDSKSLLRGRAVSDQAIAEALVSTMLLEDSSPRQALADFLLARKASIQQL
LNQPQHGAGIKAQVCSLVELLVTTLYQAYAVFYVPPEGRLAETGLGSGLLFATLENATSA
TSAAKGKKVLHEDMSAGSWFKYLPPSVTDFQPALRTLAQPIQSEQLRDTLQQWIDTCKED
IRCGVSSLLVFVRSLKGLASIRDGVWDLLSSDSINQHWAMVCQRLLDKPISLWDDLLQQL
FLQRLQAITQEGTEGISSSCRQLLTSALHDLEAQPSSLSLSSSLSSSSSSSNSSAGGFSR
GAQFESDVAAFLWSEAAGDLQSDAAWVSVAQRGQQQQQQQQKSGLSMKTQALTPCVQSFC
SALDAKLKAQLDDLQHYLPADKNGKDAASSTNVSPLETTSTSSSSAFNRFRDAWAVEDTL
REHCLACVRDVLASVRTELASAQERCSGSPDASPRRMGLVLFMARLCQSMGELCPSLRQC
ILGKQQGAVEVPVRGTPRQSRKLSKGGGAKAVEVSPAQAKWAGLKEELLTCSMEAYGIWS
GALSKTVVERFSAALHSESAGAILGTATNWEELEIQEEAESGNSVVSKIRLPVQPSWYVQ
SLLFHLCLEVNRVGGHALPKVTLVELLKGCLDQVLDQYEMLTRNCQGKDVAFLMTQNRAL
QLLFDVRYLSATLAARLEEGKSSRSQQDPRVQEVCDSLEGHIDPFDLDVFTPHLNSNLNR
VSQRTSVLLGLLAGTEKQFSSRGNAVTTQEPYNILPLSSSQIRFGLLPLSMTNSRKAKSA
TRSTDITRPLVTPASTAAPEDSFRPGNLFRQLANQEEEQAGSSLFKLGWLSSMSK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagttgttccagctcagtctcttcgggtgtctgaaatcaaagacccgacggtc
ttgtttgaacggtacaacaccgaggagattcgaacgatagagcgcagggtacggggtgga
atagagcaaaaaaaggaggaacttcgtcagatggtcggcgagcgttaccgggacctaata
gatgctgctgacaccattggcgagatgaggcagtgttcggaaagtgtcgtgaaatccatc
cagaacatgtacagcttttgcaacaagttaaaacaaacaaaaacctcgcttcagataaat
agcaaagaagagagtcaaaagcagtcccaagagaaattctacactatggcagctcatata
aagcttcttctggagatcccagagaggatatggagtgccatggaatcctcccagtacctg
caggctacccagctgtacttgctgtgctgccacctgaacagccagctccacctggagggc
ggaggaccacattacagcccagtgctcacacgcttccccatcctggtcaggcaggtggcg
gctctaggacacttcaggtccacaattctgctggacagcaagtctctgctgcgaggccgg
gcggtgtcagaccaggccatcgccgaggcgctagtctccaccatgctcttggaggacagc
tcgccccgccaggccctggcagacttcctgctggcccgcaaagcctccatccagcagctg
ctcaaccagccacagcatggtgctggtatcaaagcccaggtgtgctcgctggtggagctg
ctggtcaccaccctgtaccaggcgtacgccgtgttctacgtgcccccagaggggagactg
gcagagaccggcctgggctccggcctgctcttcgccaccctggagaacgccacatccgcc
acgtctgccgctaaagggaagaaggtcctccatgaggatatgagcgcgggcagctggttt
aagtacctgcccccctcagtgacggacttccagcccgcccttcgcaccctggcccagcct
attcagagcgaacagctgcgggacaccctgcagcagtggattgacacgtgtaaggaggac
atccgctgcggcgtgagcagcctgctggtgttcgtgcgtagcctcaagggcctggcctcc
atccgggatggcgtgtgggacctgctgtccagcgactccatcaaccagcactgggccatg
gtgtgccagaggctcttggacaagccaatctccctctgggacgacctgctgcagcagctc
ttcctccagcgcctgcaggctatcacccaggagggcactgagggcatctccagcagctgc
aggcagctgttgacctctgccctacacgacctggaggcacagccttcctcgttatcgctg
tcgtcatcgctgtcatcctcctcctcttcctccaactcctccgctgggggcttcagccgg
ggggctcagttcgagagcgacgtggccgcctttctgtggtcggaggcggcgggggacctg
cagagcgacgcggcctgggtgagcgtggcgcagcgcgggcagcagcagcagcagcagcag
cagaagagcggcctgtccatgaagacccaggcactgaccccctgcgtgcagagcttctgc
tccgcgctggacgccaagctcaaggctcagctggacgacctgcagcactacctgcccgcc
gacaagaacggaaaggacgccgcctcgtccaccaacgtctcccctctagaaaccacctcc
acctcctcctcctcggctttcaaccgtttccgtgacgcctgggctgtggaggacacgctg
agggagcactgcctggcctgcgttcgggacgttctggccagcgtgcgcacagagctggcc
tccgctcaggagaggtgctccggcagccctgatgccagtccccgtcgcatgggcttggtt
ctgttcatggcacgcctgtgccagtccatgggggagctgtgtccgagcctcaggcaatgc
attctgggaaaacagcaaggggcagtggaggtcccggtaagaggcacgcccagacagagc
aggaagctaagcaaagggggcggggccaaggctgtggaggtcagccctgcacaggccaag
tgggcggggttgaaggaggagcttctcacctgtagcatggaagcttacggcatctggagt
ggagccctgtcaaagacggtggtggaacgcttctcggcggcgctgcacagcgaatcagct
ggggccatcctgggcactgccacaaactgggaggagttagagattcaggaggaggcggag
tcaggaaacagcgtagtgtccaagatccgccttcccgttcagccctcctggtatgtgcag
tctctcctcttccacctgtgcctggaggtcaaccgggtcggaggtcacgctcttccaaag
gtcacgctggtggagctgctgaagggctgcctggaccaagttctggaccagtatgagatg
ctcaccaggaactgccagggcaaggacgtggccttcctcatgacccagaaccgagcgctg
cagctgctctttgatgtgcgctacctcagcgctacgcttgccgctcgtctggaggagggc
aaaagctcccggagtcagcaggaccccagggtccaggaggtgtgtgattctctggaagga
cacattgacccgttcgaccttgatgtctttacccctcacctgaacagcaacctaaaccgc
gtatctcaaagaacctcagttctcttaggccttctggctggcacagagaagcagttcagt
tcccgtggcaacgccgtcaccacccaggagccttacaacattctgccgctatccagcagc
cagatccggtttgggttgctgccactcagtatgaccaactcccgcaaagccaagtcagcc
acacggagcacagacatcaccagaccactggtaacaccagcttcaaccgccgctcccgag
gacagcttccgccccggcaacctgtttagacagctagccaatcaggaggaggagcaggct
ggctcctccctctttaaacttggctggctgtccagcatgtccaaatga
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