Clupea harengus (Atlantic herring): 105900019
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Entry
105900019 CDS
T09045
Symbol
rrn3
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105900019 (rrn3)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
105900019 (rrn3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
105900019
NCBI-ProteinID:
XP_012682722
Ensembl:
ENSCHAG00000014388
UniProt:
A0A6P3VWA6
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Position
1:complement(5391942..5410324)
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AA seq
614 aa
AA seq
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MEVEGREFLNTPPMKTVRFGDYVANTLAKFKQGDKGDYELLKHQLTDPDIKDGQIINWLQ
EFRTCVTQLNKDHEQLIYVVLRLPWLGRSQAVVDEYLSFLSNLVSAQTVYLRTCLKMVVY
NFTPARVRIREGDVDISDSDDDDENLPRNFDLCHQALQIISRYVPSTSRFLMPILIEHFP
FVQKSSRTLECYVFNLLRVAVYIPALRREILELIISKMLTLDVSAPRADIEEMEENAEQK
NSEESQDECLFDMDEDADADSGLAPTPPDLTAMAHPVAERLDTLMSVLLGFIKDTCLQNG
VLELEKTKALYRDLLSVYDKLILPTHASYHVQYCVFYLCSFRLGLAEAFLDHLWKQLQSP
SQPSVLRQATASYMGSFLARAKFLPVATVRACLDLLVPWLHLYIDSQDANSRSFCDVTLH
GPFYAACQAVFYTLVFRHRAIVEGNMKKGLAYLQSLNLERIVMCQLNPLKVCLPAITNMF
AAITRKYQLVFCYTIMERNNRNTLPIVRSSVGGDSVSANTNPLDSFFPFDPYLLKRSGKL
IEPIFQAWEEPDYMADAPKKDIRKASAEEEDDFLRDDTPQMDTVMGMTPSSFESHLRSPS
SMGSPPLAFLQRPF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagggtcgggaattccttaatactcccccgatgaaaacagttcgttttggc
gattatgttgctaacacgttggctaaatttaaacagggtgacaaaggagattacgaatta
ttgaagcatcagttgacagaccccgacataaaagatggtcagataataaattggctacaa
gagtttcggacttgtgtcactcagttgaacaaagaccacgagcagctgatctacgttgtg
ttgcggcttccatggctgggacggagtcaagctgtggtggatgaatatctgtccttcctg
agtaaccttgtatctgcccaaaccgtgtacctcaggacttgccttaaaatggttgtctac
aattttacacctgccagggtgagaatccgggagggcgatgtggatatttcagattcagac
gatgatgacgaaaacctccctcggaactttgacctctgtcatcaagccttgcaaattatt
tcaagatatgttccatcgacaagtaggttcttgatgccaattctcattgaacacttccct
tttgtacagaagtcatcaaggactcttgagtgttacgtctttaacctgctacgagtcgca
gtgtacatcccagctctgaggcgagagatcctggaactcatcatcagtaaaatgctaaca
ttggacgtcagtgcgccccgtgctgacatcgaggagatggaagagaacgcagagcagaag
aacagtgaagaatcacaggacgagtgcctgtttgatatggatgaggacgcagacgcagac
tctggcctggcccccacccccccagacctcaccgccatggcccaccctgtggctgagcgg
ctggacacactgatgagcgtcctcctgggcttcattaaggacacgtgcctccagaatggt
gtgctggagctggagaaaaccaaagccctgtaccgggatctgctgagtgtgtacgacaag
ctgatcctgcccactcatgcctcctaccacgtgcagtactgcgtgttctacctctgcagt
ttccgcctggggcttgctgaggcgtttttagaccacctatggaagcagctgcagagcccc
tcccaaccctcagtgctgagacaggcgactgcaagctacatgggcagcttcctggcacgc
gccaaattcctgcccgtggccacggtgagggcatgcctggacctgctggtcccctggctg
cacctctacatcgacagccaggacgccaactcgcgctccttctgcgacgtgacgctccac
gggcccttctacgccgcctgccaggccgtcttctacacgctcgtgttcagacacagggcc
atcgtcgagggcaacatgaagaaagggctggcgtacctgcagagcctgaatctggagcgg
atcgtcatgtgccagctcaacccgttaaaagtctgcctgcctgccatcaccaacatgttt
gctgccatcaccaggaagtaccagctcgtcttctgctacaccatcatggagcgcaacaac
cgcaacacgctgcccatcgtcaggagctctgtagggggcgactctgtgtcggctaacacc
aatcctctggacagcttcttcccctttgacccttacctgctcaagagatcaggaaaactg
atagagcccatctttcaggcgtgggaggagcctgactacatggctgacgccccaaagaag
gatatcagaaaagcctctgcagaggaggaggatgacttcctgcgggacgacaccccccag
atggacacggtcatgggcatgacccccagctcgttcgagtcgcacctccgcagccccagc
agcatgggctcccccccactggcgttcctccagcggcccttttaa
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