Clupea harengus (Atlantic herring): 105900060
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Entry
105900060 CDS
T09045
Name
(RefSeq) huntingtin-interacting protein 1-related protein isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105900060
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
105900060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
105900060
NCBI-ProteinID:
XP_031434137
Ensembl:
ENSCHAG00000022816
UniProt:
A0A6P8GF62
LinkDB
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Position
12:complement(15578566..15597057)
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AA seq
1178 aa
AA seq
DB search
MTSKSKEKEKSEKVLAADKEQFVKSQLNSITKCVNTSETSLKEKHARNIILGTHKEGGAV
TFWSHAVSLPLSSNAILSWKYCHMVHKVLRDGHLNSLKDTYGHCPSIKQMGALWGSLHDR
YGHIVALYVKFLCIKIEFHKKYSVIPVKLEASEDVLERAMAIDINRVYEMTLEVLEYMDS
ALKLEETAFGQLDTHNISPTAVVAQCRLAPLVLVIQDCSPLYHLLVKLLFKLHSRVPVDT
LLAHRERFRVQFEGLTKFFERARDIEFFRKIIEIPELPESPPNFLRAAALAEHVKPVVVS
QPVPEEEEPAWSEGPATGYPMHFAYNQFPEPSEDGFEVRESEVESLRKQLEAVKPELHSV
KAEAQRCVAHLQAQVRQLEAEVVDQRDQKQLALLEREQWRMEVEGLRGSAQATQYAAVEE
AGTRAQAAQMHFSRLKEKHAELVSRHADLMRKNTETMKQLSGAQQTQEELVKGRRQMAEE
LERAKIENSSRLQEQQQEIGRLRREVESSRAEVAHVSSSLQNKDQAGEQMNSMLQGLQAE
REQLRRSVREQEAQIAQLQQSTTLQHSHVQQERDRSQREIATLQQQLQEKERREEEQRRE
IERLKRELEEKRMEVTHAQGALQYKETAGEQMNSMLQGLQAEREQLRRSVREQEAQITQL
QQSTTLQHSHVQQERDRSQREITTLQQQLQEAAGREAELKRKLQEEQFALLQCAVVEAEG
IVLDALAKVDDPMHVRNTCSPDYLVNRAETTLGSIDKMQQSHAGYLRNMDDASGLLRTVT
QFAHLAADTIVNGAATAHSAPVDQADCLNDNCRECATHCLQFLKEMKLQPTLPGAEPSAI
RYVVQCILTLGQNLRPKGVDVQKKELGDIVDKEMIATSSAIEEAVLRMSEILNTTKRDTS
GVKLQVNSSIINSCSDLMKAVHMLVMSATDLQKDIVESGRGAASVKEFYAKNSVWTEGLI
SASKAVGWGATQLLDSADRISLDQGKYEEVIVCSHEIAASTAQLVASSKVKADRNNKRLH
RLQQASRHVTEMAASVVTSTKAGQMQIDDMDTMDFSGVSLIKLKTEEMDTQVRVLELESR
LARERVHLGELRKKHYDLAGTPADPLPTDVGDFSDFPPPPPPTLFIPESYSNSNPFSPHP
SSNPFITEPPASEPPQTTTTKKPNIFQKSGTLLKSAFR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaagtctaaagaaaaagaaaaatccgagaaggttttagctgccgataaggag
cagtttgtcaaatcacagctgaacagcattaccaaatgtgtcaacacctcagagacttcc
ctcaaggagaaacatgcccgcaacatcatcctgggcactcacaaggagggtggggctgtg
actttctggtcacacgcagtcagcctgcccctgtccagcaatgccatcctcagctggaaa
tactgtcacatggtgcacaaagtcctacgcgatgggcatctcaattccctgaaggacacg
tacgggcactgcccaagcatcaaacagatgggcgcactgtgggggagtctccatgatcga
tatgggcatattgttgccctatatgtcaagttcttgtgcatcaaaattgaattccacaaa
aagtactcagtcatccctgtgaaactcgaggcctctgaggacgtcctggagagagcaatg
gccattgacatcaacagagtttatgaaatgacactagaggttctggagtacatggattca
gctctgaagttggaggaaacagcgtttggacagctggacacccacaatataagcccgact
gcagtggtggcccagtgtcgcctggcccctctggtgctggtcatccaggactgcagtcca
ctctaccacttgctggtcaaactgctcttcaaactgcacagccgtgtacctgtggatacg
ctgctggcacatcgggaacgattccgtgtccagtttgaaggattgacaaagttctttgag
agagccagagacattgagttcttcagaaaaatcattgaaattcctgaattgccagagtcc
cctccaaacttcctgcgtgcggctgcattggcagagcatgtgaagccggtggtggtcagt
cagccggtccccgaggaggaggagcctgcatggagtgagggtccggccacgggctaccca
atgcactttgcatacaatcaattccccgaaccgtcagaagatggatttgaagtaagagag
tcagaggtggagagcctgaggaaacagctggaggctgtgaagccagagctacattcagtc
aaggctgaggctcagcgctgtgtcgcccatctgcaggcgcaggtgcgtcagctggaggcg
gaggtggtggaccagcgcgaccagaagcagttggcgctgctggagcgggagcagtggcgc
atggaggtggaggggctgcgaggctccgcccaggccacccagtacgctgctgtggaggag
gccgggactagagcccaggcagcacagatgcacttctccaggctgaaggagaagcacgca
gagctggtgtccagacacgcagatctcatgagaaagaatacagagacaatgaagcagctg
tccggtgcacagcagacccaggaggagctggtgaaaggtagacgccagatggctgaggag
ctggagagggcgaagatagagaacagctctaggctgcaggaacagcagcaggagatcggt
cgcctgaggagggaggtggagagcagcagggctgaggtggcccacgtaagcagcagcctt
cagaacaaagaccaggctggagagcagatgaacagcatgctgcagggcctgcaggctgag
cgagagcagctgaggaggtctgtgagggagcaggaggcccaaattgcccagctgcagcag
agcacaacgctgcagcactcacacgtgcagcaggagagagaccgcagccagagggagatc
gcaacactgcagcaacagctacaggagaaggagcgtcgtgaggaagagcagaggcgtgag
attgagcgtctgaagagagagctagaggagaagcgtatggaggtgacccatgctcaggga
gcactgcagtataaagagacggctggagagcagatgaacagcatgctgcagggcctgcag
gctgagcgagagcagctgaggaggtctgtgagggagcaggaggcccaaatcacccagctg
cagcagagcacaacgctgcagcactcacacgtgcagcaggagagagaccgcagccagagg
gagatcacaacactgcagcaacagctacaggaggcggctggccgtgaagctgagctgaag
cgaaagctgcaggaagagcagtttgccctgctgcagtgtgcggtggtggaagcggagggc
atcgtgctggacgccctggccaaagtggacgaccctatgcatgtgcgcaacacctgctct
ccagactacctggtcaaccgggcggagacgactctgggctctattgacaagatgcagcaa
agtcatgctggctacctcagaaacatggatgatgccagtggattgctgcggactgtaacc
cagtttgctcacctggctgcagacaccattgtcaacggagctgccacagcacactccgct
cctgtggaccaagctgactgtctgaatgataactgcagggagtgtgccacccactgtctg
cagtttctgaaggagatgaagctgcagcccacgctccctggggccgagccctccgccatc
cgctacgtggtccagtgcatcctcaccttgggacagaacctgcgacctaaaggtgtagat
gtccagaagaaagagctgggagacattgtagacaaggagatgattgccacttcctctgcc
attgaggaggctgtgctgagaatgagtgaaatactgaacaccaccaagagggacacatct
ggtgtaaaactacaggtcaactcaagcatcatcaattcctgttctgacctcatgaaggct
gtgcacatgctggtgatgtcagctacagacctccagaaggacatcgtggagagtggaaga
ggagcggcatctgtgaaggagttctacgctaagaactccgtctggactgaaggcctcatc
tctgcatctaaggcagtgggatggggagccacacaactgctagactcagctgacaggatc
tccttagaccagggcaagtacgaggaggtgatcgtctgctcccatgagattgctgccagc
acagcacagcttgtcgcttcctctaaggtgaaggcggaccgcaacaacaagaggctgcac
aggttgcagcaggcctcgcgtcatgtgactgaaatggcggcatctgtggtcacttccacc
aaggcagggcagatgcagattgatgatatggacaccatggacttctctggggtgtccctg
atcaagttgaagactgaggagatggacactcaggtgcgtgtcctagagctggagtctcgg
ttggccagagagcgtgtgcatctcggggagctcagaaagaagcactatgacctcgctgga
actcctgcggacccactgcccactgacgtgggtgactttagcgacttcccccctccacct
ccccccacgctattcattcccgagtcctatagcaacagcaaccccttcagcccgcatccc
tccagcaacccattcatcacagagccccctgcctctgaaccccctcagaccactacaact
aagaaacccaacatcttccagaaatctggaacccttctaaagagtgcgtttaggtga
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