KEGG   Clupea harengus (Atlantic herring): 105900096
Entry
105900096         CDS       T09045                                 
Name
(RefSeq) integrin alpha-6-like
  KO
K06485  integrin alpha 6
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04382  Cornified envelope formation
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04514  Cell adhesion molecule (CAM) interaction
char04518  Integrin signaling
char04810  Regulation of actin cytoskeleton
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105900096
   04514 Cell adhesion molecule (CAM) interaction
    105900096
   04518 Integrin signaling
    105900096
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105900096
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105900096
   04810 Regulation of actin cytoskeleton
    105900096
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105900096
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105900096
   04515 Cell adhesion molecules [BR:char04515]
    105900096
   04090 CD molecules [BR:char04090]
    105900096
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105900096
  Exosomal proteins of breast milk
   105900096
Cell adhesion molecules [BR:char04515]
 Integrins
  Integrin alpha subunits
   105900096
CD molecules [BR:char04090]
 Proteins
  105900096
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_1 FG-GAP_3 DUF11
Other DBs
NCBI-GeneID: 105900096
NCBI-ProteinID: XP_031424711
Ensembl: ENSCHAG00000004479
UniProt: A0A6P8FM64
LinkDB
Position
6:complement(6125364..6139904)
AA seq 1049 aa
MAPLRRRLCLLLLPPLLLVLDWCQFAGVSAFNLDTAGALRKDGDPGSLFGFSLAMHHQKH
LGDRKVLLVGAPHAKALGKQRANITGGLYSCRFTTVPSDCQRIQFDTTETEKDHKENQWM
GVSVQSQGPGGKVVVCAHRYQRWESEESRLMPGRCIILEQDLQVSKLDESSWDRKFCAEE
GRLVGGRTKERFAYCQQGVSPAFTSDKRHILFGAPGVYDWKGIVRLEPAGDRSALDAEFL
ETGDENEYNPKLVPVDISSYLGFSLGSSTALTKMGELIIVAGAPRAGHSGKVLLLKREGT
SSLSMEHTLTGPGLASSFGYDLAVVDLNADGWEDLVVGAPQYFEKDKEVGGAVYVYINRA
DGRDWSDPKIVRLHGNKDSMFGLAVESIGDVNQDGFQDLAVGAPYEGSGRVYIYHGSSEG
IQHKPTQILEGEDGVTLFGYSLAGNMDIDGNEYPDVAVGSLSDSVFVYRARPVINIRRTL
MITPDKIDIKKEKCDLRPCRMTVKSCFSYTTHPATYRPNLNISYVLEAERVVFQDASQGT
LRLQSPSKEECVSTRLRLQTNMHDKLRGIPISVSASLLSATSSHDSTHNFLPELTPVTSP
QDKQPQAELRFVNTGCGSDNICQSNLALQYQFVSRPNKGNADRLTPLRRENGTTLIPAGD
KEVGLNIKVTNKEGDDAHHSQLLATFPDSLSYVSYRSQDKSVYCIANGNGTQVECELGNP
LPRDAEVHLYITLTTERISLTTSDVNVTLQLKTISAQNISAVDARGRVIFDLDLQVFGLA
RPSQVSVGGEVKGENKMTSEEDIGSLVQYEFRINNLGRPLKSFATASLNIQWPKVNKNGK
WLLYLVQISSKGVQAVSCSPAQEVSPLKHIKAQGMARGKRQAVESELEALSTDGILSLFG
SKRKYKILACGEEVKCATIKCPLLGLDNNAVVILRSRLWNSTFLEEYKSLNYLDIVVNAS
LSLDSAPENVILRSSHTQVKLTVFPERKLSLYGRVPWWVILLSVLLALLLLALLGVLLWK
LDCCSCSICAKNKKQYHVISGWEGAHPTG
NT seq 3150 nt   +upstreamnt  +downstreamnt
atggcaccattgagacggagactctgcctgttgctgctgccaccactgttgctggttctg
gactggtgtcagtttgctggcgtctcagcctttaacttggacacggccggagccctgagg
aaggacggggacccagggagcctgtttggtttctctctggccatgcaccaccaaaagcac
ctgggtgacaggaaagtattactggtaggtgctcctcatgccaaagccttggggaagcag
agggccaacatcactgggggactgtatagctgcagattcacaaccgtgcccagtgactgt
caacgcatccagtttgacaccacggaaactgaaaaggaccacaaagagaaccagtggatg
ggggtgagcgttcagagccagggacctgggggaaaggtcgtggtatgtgcccaccgctac
cagagatgggagtcagaggagtctcggctgatgcccggccgctgtataatcctggagcag
gacctgcaggtatccaagctggacgagtcctcctgggaccggaagttctgtgctgaagaa
ggccgcctggttgggggcaggaccaaggagcgctttgcctactgccagcagggagtctct
cctgcattcaccagcgacaaacgccacatcctgtttggagctccaggggtctacgactgg
aagggtatcgtgcgtctggagcctgcaggtgaccggagcgcccttgatgctgagttcctg
gaaactggggatgagaacgagtacaacccaaagcttgtgcctgtcgacatcagcagttat
ttaggattctctctaggctccagcactgctctgaccaagatgggggagctgatcatcgtg
gccggggcccctagggcaggacacagtgggaaggtgctgctgcttaagcgtgagggaacg
agcagtctgagtatggagcataccctcactggacccggcctggcctcgtccttcggctac
gacctcgctgtagtagacctcaacgcagacgggtgggaggacctggtggttggagccccc
cagtactttgaaaaggataaagaagtgggaggggccgtctacgtctacatcaatcgcgcc
gacggcagagactggagcgacccaaagattgtccgtctccacggcaacaaggactccatg
ttcgggctggcagttgaaagcattggtgatgtcaatcaagacggattccaagatcttgcc
gtgggagccccgtacgagggatctgggcgagtctacatctaccacggctcttctgagggc
attcaacataaacccacgcagatcttagaaggtgaagatggtgtgacgttatttggatat
tccttggcagggaatatggacatagacgggaatgaatatccagatgtagctgtggggtct
ctctcagattctgtttttgtttacagggcacgaccagtcataaatattaggaggaccttg
atgataacccctgataaaatcgacataaaaaaggaaaaatgtgatcttcgtccctgcaga
atgactgtcaagtcctgtttttcttacaccacacatcctgccacctaccggccaaactta
aatatcagctacgtcctggaggcagagagggtcgtcttccaggatgcgtcccagggcacg
ctgaggctccagagtcccagtaaggaggagtgtgtgagcacgaggctcagactacagact
aacatgcacgataagctgaggggtatccccatcagtgtctctgcatcgctcctgagcgca
acatccagccatgattcgacacacaacttcctgcccgagctcacacctgtcacctcacca
caggacaaacaaccacaggctgagctcagatttgtgaatacaggatgcggcagcgacaac
atctgtcagagtaacctggcactccagtatcagtttgtatccaggccaaacaagggcaac
gcagaccgcttaacaccattacgaagagagaatggcaccacactgattcctgccggtgac
aaagaggttggtctgaatattaaggtgacaaacaaagaaggagacgacgcccatcacagc
cagctgctggccaccttccccgactcgctctcttacgtgtcctatcgttcccaggacaaa
tccgtgtactgtatagctaatggcaatggaacccaggtggagtgtgaattaggaaatccg
ttacccagagatgcagaggttcatctttatattacactgaccactgagaggatctccttg
acaacttcagatgtcaatgttactctgcaactgaaaacgatcagtgctcagaatatatca
gcagtggatgctaggggccgagtcatcttcgatctggacctgcaggtgtttggtcttgca
cggccatcccaggtgtcagtcggaggggaagtgaaaggggagaataaaatgacatcagag
gaagacattggtagtctggtacagtacgagttcaggatcaacaatctgggacgacctctg
aaatcattcgccacagcatcactgaacatccagtggcccaaagtgaataagaatgggaaa
tggctcctatatctggtgcagattagcagtaaaggggtccaggcggtgtcctgctctccc
gcacaggaagtcagccctctcaaacacatcaaggctcaaggtatggcgcgagggaaacgg
caggcagtggagtcagagctggaggccctgagcactgacggaatattatccctatttgga
agcaaaaggaaatacaaaatactggcttgcggtgaggaagttaaatgtgcaactataaag
tgtcccctattgggcctggataacaacgcagtggtcattctcagatctcgtttgtggaac
agcacatttcttgaggagtataagtccttgaactacctggacattgtggtgaacgcctct
cttagccttgattcagctccagaaaacgtcatcctcaggagttctcatactcaggtgaag
ctgactgtgttccctgagaggaagttgtcgctgtatggcagagtgccctggtgggtgatt
ctgctctccgtcctcctggccttgctcctgctggctctactgggcgtcctgctgtggaag
cttgactgctgcagttgctctatatgtgccaagaacaagaaacaataccatgtgatctca
ggatgggagggggctcatcccactggatag

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