KEGG   Clupea harengus (Atlantic herring): 105900128
Entry
105900128         CDS       T09045                                 
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
  KO
K06761  contactin 3
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105900128 (cntn3a.2)
Cell adhesion molecules [BR:char04515]
 Immunoglobulin superfamily
  Contactins
   105900128 (cntn3a.2)
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_5 Izumo-Ig Pur_ac_phosph_N Tissue_fac
Other DBs
NCBI-GeneID: 105900128
NCBI-ProteinID: XP_012682835
Ensembl: ENSCHAG00000023632
UniProt: A0A6P3VXC5
LinkDB
Position
4:28402028..28444699
AA seq 1025 aa
MMLLWKQFLLLSIIECLADGSDYKSFHGPRWRMEPSDLILPVGGTQTEATLTCDAKGTPP
PQYRWSFNGTSIDLRTDPRRVLSAGNLIIRDLDQDQDAGTYQCTAFNPLGAILSRRASLK
FAYLNFKTQARSAVSVREGQGVVLLCGTPTYSGDLTFAWVFNEYTYFVQQDNRRFVSQET
GNLYIAKVEPSDVGNYTCIVMSRVTRERVSSSPTPLILRTDGVMGEYEPKIEVHFPDTVP
AAKGSVVTLECFALGNPVPEITWRRANGVPFPSKVKMKNSNVVLEIPSFQQEDAGGYECL
AENKMGKNVAKGRLLFHAKPQWIQTMRDSALALEERLAWECKANGKPKPSYSWLKNGETL
VPEGRVQLADGALSIEAVNLSDDGMYQCVAENKHGIIYFSAELVVLASAPDFSKSPLRPL
QKAKVGSMVTLECRPQAFPRADSNWRKGEEPLLTTERIIILPDGTLKITNLTKTDGGTYT
CLAQNQFGTASTSGRLLVTKPTRISQGPSNMEIIVGESIVLPCQVACDPALDVSFSWAFN
GQVISKADRHFEHVGGPMAGDLMIRNIQLKHAGKYVCVVDTDVESLSAASVLVVKGPPGP
PETVTVDEITDSNAQVSWMPGPDNGSPIRGYIIQTKTPFTVGWQAVDTVPEVIDGNTLTA
TVVNLNAWVEYEFRVVARNSVGMGEPSPASLKTRTEDTVPDTAPTDVSGGGGSKSELVIT
WEPVPEELQNGDGFGYIIAFRALGEVTWTHAVTSTPGVSRYVCRNDSIPPFCPFSVKVGA
YNTKGQGPFSAVTTVFSAEEEPSGVPGRVWARSASASEIEVNWLPLSASSPERVLGYEVV
YWEDDTKPETMGKVRVSGNQTSVSVSGLRGHTQYFLTVSAFNTAGTGPPSPTINATTKRF
PPGQMPQNVEWTLIGSKLIVHWDPVVAMEMESDVTGYQVSYWRRKHREVNSVTTNETTVE
ILLPADDDYVIQVRALSEGGEGIPTETISVHKLSMSARGSGSWRPSSVASSLLVFVALSA
SMSPL
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgatgttactatggaaacagtttttgctgctatcaatcattgagtgtcttgcagatggc
tcggattataagtcatttcacggccccagatggaggatggagcccagtgatctcatcctc
cccgtggggggcacacagacggaggccaccctcacctgtgatgccaagggcaccccgcct
ccccagtacaggtggtcctttaacggcacgtcgatcgatctcaggaccgacccgaggcgc
gtgctgtctgcaggcaacctgatcatcagggatctggaccaggaccaggacgccgggacc
taccagtgcacggccttcaacccactcggcgccattctcagcaggagggccagcctcaag
tttgcatacttgaattttaaaactcaagccagaagtgctgtatctgttcgagagggtcaa
ggggtcgttctcctttgtggaacgccaacatactcaggagaccttacatttgcgtgggtc
ttcaatgaatacacttacttcgtccaacaagacaatcgccgctttgtttctcaggagact
gggaacctgtacatcgctaaagtcgagccgtccgacgtgggcaattacacctgcatcgtg
atgagtcgcgtcacccgggagagagtgagcagctccccgactcctctcatcctcaggaca
gacggagtcatgggtgaatacgagccgaaaatagaagtgcatttccctgacacagtccca
gctgcgaagggatccgttgttacgctggagtgtttcgctcttggcaaccccgtcccagag
atcacctggaggcgagcgaacggagttcccttccccagcaaagtgaaaatgaagaactcc
aacgtggtgctggagatccccagcttccagcaggaggacgcgggcgggtacgagtgcttg
gcggagaacaagatggggaagaacgtcgccaaaggacgcctcctgttccatgcgaagccc
cagtggatccagaccatgcgagactcggccctggccctagaggagaggctggcctgggag
tgcaaggccaacgggaagcccaagccatcctacagctggctcaagaatggagagacgctg
gtcccagaggggcgagtgcagctggcggacggggcgctctccatagaggcggtgaacctg
tcggacgacggcatgtaccagtgcgtggcggaaaataaacacggcatcatttatttcagt
gcagagctggtggtgttagcgtcggccccagacttctctaagagcccgctgcggcccctg
cagaaggccaaggtgggcagcatggtgacgctggagtgccggccccaagccttccccaga
gcagacagcaattggaggaagggcgaggagcctctgctgaccaccgagaggataattatt
cttcctgatggaacgctgaaaatcacaaatttgacaaaaacagatggaggcacctacacc
tgcttggcacaaaaccagtttgggacagccagcacctctggaagacttctagttacaaag
cccacacggatcagtcaaggcccgtcgaacatggagatcattgtgggcgagagcatcgtg
cttccctgccaggtggcgtgcgacccggccctggacgtatcgttctcctgggctttcaat
ggccaagtcatcagcaaagcagacagacactttgaacacgtgggagggccaatggcgggt
gacctgatgattcggaacatccagctgaagcatgctgggaagtacgtgtgtgtggttgat
acagacgtcgagagcctctctgcggcttccgttttggttgtcaaaggtcccccgggcccc
cccgagaccgtgacggtggacgagatcacggacagcaacgcccaggtctcctggatgccc
ggccccgataacggcagccccatcagggggtacatcatccagaccaagacccccttcacc
gtgggctggcaggcggtggacacagtgcccgaggtgattgatgggaacacgctgacggcc
accgtggtgaacctgaatgcctgggtggagtatgagttccgtgtggtggcgaggaacagc
gtggggatgggggagcccagccctgcttcgctgaaaacccggacggaagatactgtccct
gacacggcccccactgatgtcagcggcggaggaggctccaaatctgagttggtaataacg
tgggagcctgtgcctgaggaactgcagaacggtgacggcttcggctacatcatcgccttc
cgggccctgggtgaggtgacctggacccacgccgtcacctccacacccggcgtgtctcgc
tacgtctgccgcaacgacagcatccccccgttctgccctttcagcgtgaaagtgggcgcc
tacaacaccaaaggccagggccccttcagtgccgtcactaccgtcttctccgccgaggag
gagcccagtggtgtgccaggcagagtttgggccagaagtgcttctgcctcagagatcgaa
gtgaactggctgcctctctccgcttcttctcctgaaagagttcttggctatgaggtggtg
tactgggaggacgacaccaagcccgagacgatgggcaaagtgagggtgtcgggcaatcag
acgtccgtctccgtcagcggcctgaggggccacactcagtacttcctgactgtgagtgcc
tttaacaccgccggaactggaccgccctcgcccacaatcaacgccaccaccaaacgattc
ccacctgggcagatgccgcagaacgtggagtggaccctcattggctccaagctcatcgtg
cactgggatcctgtggtcgccatggagatggagtcggatgtcacagggtaccaggtgtcc
tactggagacggaagcacagggaggtgaacagcgtcaccaccaatgagaccacggtggag
atactcctgccggccgatgatgactacgtcatccaggtcagggcactaagtgaggggggc
gagggcatcccgactgaaaccatctccgtccacaagctcagtatgagcgcgagaggatcg
ggatcatggcggcccagttcggttgcgtcgtctctgctcgtctttgtggcgttgtctgcg
tccatgtcccctctgtag

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