Clupea harengus (Atlantic herring): 105900128
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Entry
105900128 CDS
T09045
Symbol
cntn3a.2
Name
(RefSeq) contactin-3
KO
K06761
contactin 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105900128 (cntn3a.2)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Contactins
105900128 (cntn3a.2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Izumo-Ig
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
105900128
NCBI-ProteinID:
XP_012682835
Ensembl:
ENSCHAG00000023632
UniProt:
A0A6P3VXC5
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All DBs
Position
4:28402028..28444699
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AA seq
1025 aa
AA seq
DB search
MMLLWKQFLLLSIIECLADGSDYKSFHGPRWRMEPSDLILPVGGTQTEATLTCDAKGTPP
PQYRWSFNGTSIDLRTDPRRVLSAGNLIIRDLDQDQDAGTYQCTAFNPLGAILSRRASLK
FAYLNFKTQARSAVSVREGQGVVLLCGTPTYSGDLTFAWVFNEYTYFVQQDNRRFVSQET
GNLYIAKVEPSDVGNYTCIVMSRVTRERVSSSPTPLILRTDGVMGEYEPKIEVHFPDTVP
AAKGSVVTLECFALGNPVPEITWRRANGVPFPSKVKMKNSNVVLEIPSFQQEDAGGYECL
AENKMGKNVAKGRLLFHAKPQWIQTMRDSALALEERLAWECKANGKPKPSYSWLKNGETL
VPEGRVQLADGALSIEAVNLSDDGMYQCVAENKHGIIYFSAELVVLASAPDFSKSPLRPL
QKAKVGSMVTLECRPQAFPRADSNWRKGEEPLLTTERIIILPDGTLKITNLTKTDGGTYT
CLAQNQFGTASTSGRLLVTKPTRISQGPSNMEIIVGESIVLPCQVACDPALDVSFSWAFN
GQVISKADRHFEHVGGPMAGDLMIRNIQLKHAGKYVCVVDTDVESLSAASVLVVKGPPGP
PETVTVDEITDSNAQVSWMPGPDNGSPIRGYIIQTKTPFTVGWQAVDTVPEVIDGNTLTA
TVVNLNAWVEYEFRVVARNSVGMGEPSPASLKTRTEDTVPDTAPTDVSGGGGSKSELVIT
WEPVPEELQNGDGFGYIIAFRALGEVTWTHAVTSTPGVSRYVCRNDSIPPFCPFSVKVGA
YNTKGQGPFSAVTTVFSAEEEPSGVPGRVWARSASASEIEVNWLPLSASSPERVLGYEVV
YWEDDTKPETMGKVRVSGNQTSVSVSGLRGHTQYFLTVSAFNTAGTGPPSPTINATTKRF
PPGQMPQNVEWTLIGSKLIVHWDPVVAMEMESDVTGYQVSYWRRKHREVNSVTTNETTVE
ILLPADDDYVIQVRALSEGGEGIPTETISVHKLSMSARGSGSWRPSSVASSLLVFVALSA
SMSPL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacagtttttgctgctatcaatcattgagtgtcttgcagatggc
tcggattataagtcatttcacggccccagatggaggatggagcccagtgatctcatcctc
cccgtggggggcacacagacggaggccaccctcacctgtgatgccaagggcaccccgcct
ccccagtacaggtggtcctttaacggcacgtcgatcgatctcaggaccgacccgaggcgc
gtgctgtctgcaggcaacctgatcatcagggatctggaccaggaccaggacgccgggacc
taccagtgcacggccttcaacccactcggcgccattctcagcaggagggccagcctcaag
tttgcatacttgaattttaaaactcaagccagaagtgctgtatctgttcgagagggtcaa
ggggtcgttctcctttgtggaacgccaacatactcaggagaccttacatttgcgtgggtc
ttcaatgaatacacttacttcgtccaacaagacaatcgccgctttgtttctcaggagact
gggaacctgtacatcgctaaagtcgagccgtccgacgtgggcaattacacctgcatcgtg
atgagtcgcgtcacccgggagagagtgagcagctccccgactcctctcatcctcaggaca
gacggagtcatgggtgaatacgagccgaaaatagaagtgcatttccctgacacagtccca
gctgcgaagggatccgttgttacgctggagtgtttcgctcttggcaaccccgtcccagag
atcacctggaggcgagcgaacggagttcccttccccagcaaagtgaaaatgaagaactcc
aacgtggtgctggagatccccagcttccagcaggaggacgcgggcgggtacgagtgcttg
gcggagaacaagatggggaagaacgtcgccaaaggacgcctcctgttccatgcgaagccc
cagtggatccagaccatgcgagactcggccctggccctagaggagaggctggcctgggag
tgcaaggccaacgggaagcccaagccatcctacagctggctcaagaatggagagacgctg
gtcccagaggggcgagtgcagctggcggacggggcgctctccatagaggcggtgaacctg
tcggacgacggcatgtaccagtgcgtggcggaaaataaacacggcatcatttatttcagt
gcagagctggtggtgttagcgtcggccccagacttctctaagagcccgctgcggcccctg
cagaaggccaaggtgggcagcatggtgacgctggagtgccggccccaagccttccccaga
gcagacagcaattggaggaagggcgaggagcctctgctgaccaccgagaggataattatt
cttcctgatggaacgctgaaaatcacaaatttgacaaaaacagatggaggcacctacacc
tgcttggcacaaaaccagtttgggacagccagcacctctggaagacttctagttacaaag
cccacacggatcagtcaaggcccgtcgaacatggagatcattgtgggcgagagcatcgtg
cttccctgccaggtggcgtgcgacccggccctggacgtatcgttctcctgggctttcaat
ggccaagtcatcagcaaagcagacagacactttgaacacgtgggagggccaatggcgggt
gacctgatgattcggaacatccagctgaagcatgctgggaagtacgtgtgtgtggttgat
acagacgtcgagagcctctctgcggcttccgttttggttgtcaaaggtcccccgggcccc
cccgagaccgtgacggtggacgagatcacggacagcaacgcccaggtctcctggatgccc
ggccccgataacggcagccccatcagggggtacatcatccagaccaagacccccttcacc
gtgggctggcaggcggtggacacagtgcccgaggtgattgatgggaacacgctgacggcc
accgtggtgaacctgaatgcctgggtggagtatgagttccgtgtggtggcgaggaacagc
gtggggatgggggagcccagccctgcttcgctgaaaacccggacggaagatactgtccct
gacacggcccccactgatgtcagcggcggaggaggctccaaatctgagttggtaataacg
tgggagcctgtgcctgaggaactgcagaacggtgacggcttcggctacatcatcgccttc
cgggccctgggtgaggtgacctggacccacgccgtcacctccacacccggcgtgtctcgc
tacgtctgccgcaacgacagcatccccccgttctgccctttcagcgtgaaagtgggcgcc
tacaacaccaaaggccagggccccttcagtgccgtcactaccgtcttctccgccgaggag
gagcccagtggtgtgccaggcagagtttgggccagaagtgcttctgcctcagagatcgaa
gtgaactggctgcctctctccgcttcttctcctgaaagagttcttggctatgaggtggtg
tactgggaggacgacaccaagcccgagacgatgggcaaagtgagggtgtcgggcaatcag
acgtccgtctccgtcagcggcctgaggggccacactcagtacttcctgactgtgagtgcc
tttaacaccgccggaactggaccgccctcgcccacaatcaacgccaccaccaaacgattc
ccacctgggcagatgccgcagaacgtggagtggaccctcattggctccaagctcatcgtg
cactgggatcctgtggtcgccatggagatggagtcggatgtcacagggtaccaggtgtcc
tactggagacggaagcacagggaggtgaacagcgtcaccaccaatgagaccacggtggag
atactcctgccggccgatgatgactacgtcatccaggtcagggcactaagtgaggggggc
gagggcatcccgactgaaaccatctccgtccacaagctcagtatgagcgcgagaggatcg
ggatcatggcggcccagttcggttgcgtcgtctctgctcgtctttgtggcgttgtctgcg
tccatgtcccctctgtag
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