Clupea harengus (Atlantic herring): 105900170
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Entry
105900170 CDS
T09045
Symbol
smc1al
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
char04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105900170 (smc1al)
04114 Oocyte meiosis
105900170 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105900170 (smc1al)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105900170 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
105900170 (smc1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
105900170
NCBI-ProteinID:
XP_031422756
Ensembl:
ENSCHAG00000012525
UniProt:
A0A6P8FGB4
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All DBs
Position
4:27526170..27544970
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFQKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYREDSGEERHFSRIIIGSSSEYRINGKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELSQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVSRAHVQMQLFRLYHNDAEIEKLNR
ELAHRNKEIDKDRKRMDRVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKLYKKRKLDMEELEKEQGAVEMARQEFDERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQEAEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYINTSKQSLDEQKRMEEELTEEVESAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGARLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGAYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNMQEKSKLESELANFGPRINDIKRIVQSRERDMKDLKDRMNLVEDEVFVEF
CEEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDHEKVLMWEQ
TVKKDESEIERMKKEEQRHMKIIDETMAQLQDLKNGHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLKTGTMDDISQQEGREETK
EEAAQRTSSTVLAKEALIEIDYSNLSEDHKDALSEDEIKAEMNQLQQRLNEQQSVLQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERYDRFNACFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVLNFQAIVISLKEEFYTKADALV
GVYPEPGDCVISKVLTFDLSEYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctatctaaaattaatcgagatagaaaattttaaatcttataaaggcaggcaaatt
attggacctttccagaagtttactgccatcatcggacctaatggatcagggaagtccaac
cttatggacgccatcagcttcgtgctggcagagaagaccagtaacttgagagtgaagacg
ctgaaggatctgatccatggagcccccgtggggaagccggccgccaacagggcctttgtg
agcatggtgtaccgcgaggacagtggcgaggagcgccacttcagccgaattatcataggg
tcctcctctgagtatcgcatcaacggcaaggtggtggggctgcccgagtacagtgaggag
ctggagaaactcggcattctcatcaaggccaggaacttcctcgtcttccagggtgcggtg
gagtccatcgccatgaagaaccccaaagagcgtaccgccctgttcgaggagatctctcgc
tcgggcgagctgtctcaggagtacgaccgcaggaagaaggagatggtgaaggcggaggag
gacacgcagttcaactaccaccgcaaaaagaacatcgctgccgagcgcaaggaggccaag
caggagaaagaagaggcggagcgttaccagcgcttgaaggacgaggtgtcgcgagcccac
gtgcagatgcagctgttcaggctgtatcacaacgacgccgagatcgagaagctgaaccgc
gagctggctcaccgcaacaaggagatcgacaaggaccgcaagcgcatggaccgcgtggag
gaggagctgaaggacaagaagaaggagctgggcaggctgatgagggagcagcagaccata
gagaaggagatcaaggagaaggactctgagctgaaccagaagcgtccccagtacatcaag
gccaaagagaacaccgcccacaagatcaagaagctggaggcggcacgcaagtccctgcag
aacgcccagaagctgtacaagaagcgcaagctggacatggaggagctggagaaggagcag
ggcgccgtggagatggccaggcaggagttcgacgagcgcatggaggaggaggcgcagagc
caggggcaggacctccagctggaggagaaccaggtgaaagcttaccaccgcttgaaggaa
gaggccagtaaacgggccgccactctggctcaggaggcggagaagttcaaccgggaccag
aaggccgaccaggaccgcttggacctggaggagaggaagaaagtggagacagaggccaag
atcaagcagaagatcagagagatcgaggagaaccagaagcgtattgagaaactggaggac
tacatcaacaccagcaagcaatctctggatgagcagaagcggatggaggaggagttgact
gaggaggtggagtcggccaagaggaggattgatgagattaacacagagcttaatcaggtt
atggagcagctgggcgatgcccgtatcgacaggcaggagaacagccgacagcagcgcaag
gctgagatcatggagagcatcaagagactctaccctggatctgtgtatggcagactgatc
gacctttgccagcccacccagaagaagtaccagattgctgtgaccaaggtcctgggaaag
aacatggacgccatcatcgtagactcggagaagacgggccgtgactgtatccagtacatc
aaagaacagcgaggagagccggagaccttcctgccccttgactacctggaggtgaaaccc
actgatgagaagctgcgtgagctgcgcggggcgcgtctggtgatcgacgtgatccgctat
gagccgccccacatcaagaaggcgctgcagtacgcctgcggtaacgccctggtgtgcgag
aacgtggaggatgcgcgcaggatcgccttcggaggagcatacagacacaagactgtggcg
ctggacggcaccctgttccagaagtccggtgtgatctcgggcggtgccagtgacctgaag
gccaaggcgcggcgatgggacgagaaggccgtggacaagctgaaggaccggaaggagaaa
ctcaccgacgagctcaaggaacaaatgaaagccaagaggaaggaggccgagctgcgccag
gtgcagtcccaggcccacggccttcagatgaggctcaagtactcccagagcgacctggaa
cagaccaagacccgccacctggccctcaacatgcaggaaaagtccaagctggagagtgag
cttgccaactttggtccacgtatcaacgacatcaagagaattgtccaatcacgcgagagg
gacatgaaagacctcaaagaccgcatgaatctggtggaggacgaggtgtttgtggagttc
tgcgaggagatcggggtcagaaacatccgtgaattcgaggaggaaaaagtcaagaggcag
aacgagatcgcaaagaaacgcctggagtttgagacccaaaagactcgcctcggcatccag
ctggactacgagaagaaccagctgaaggaggaccacgagaaagtgctcatgtgggaacag
acggtgaagaaagacgagagcgagatcgagcgaatgaagaaggaggagcagaggcacatg
aagatcattgatgagaccatggcccagctgcaggacctgaagaacgggcacctcaccaag
aagtccgaggtcaacgacaagaaccacgagatggaggagatccgcaagaagctgggtgga
gccaacaaggagttgacccagctgcagaaggaggtgacggccatcgagaccaagctggaa
cagaagcgcagcgaccggcacaacctgctgcaggcctgcaagatgcaggacatcaggctg
ccactcaagacaggaaccatggatgacatcagccagcaggagggaagggaggagaccaag
gaggaggcagcccagaggacctctagcacagtcctggccaaagaggctctcatagagatc
gactacagcaacctgtcagaggaccataaggatgccctgtctgaggacgagatcaaggcg
gagatgaaccagctgcagcagcggctcaacgagcagcagagcgtcctgcagaggatcagc
gcccccaacatgaaggccatggagaagctggagagcgtcagggacaagttccaggagacc
agtgacgagtttgaggcggccaggaagagagccaagaaagccaagcaggcttttgagcag
attaagaaggagcgttacgaccgcttcaacgcctgctttgagtccgtcgccaccaacatt
gatgagatctacaaggctttgtcccgcaacagcagtgcccaggccttcctgggcccagag
aaccccgaggagccctacctggacgggatcaactacaactgtgtggctcctggcaaacgc
ttcaggcccatggacaacctctcaggaggagagaagactgtagccgccctggccctgctg
tttgccattcacagttataagcctgcacccttcttcgtgctggatgagattgatgctgcc
ctcgacaacaccaacatcggcaaggtggcgaactacatcaaggatcagtctgttctgaac
ttccaagccatcgtcatctccctgaaggaggagttttacaccaaggctgatgcccttgtt
ggagtctaccctgagcctggagactgtgtcatcagcaaagttttaacctttgacctttcg
gaatatccggacgcgaaccccaacccaaacgagtag
DBGET
integrated database retrieval system
