Clupea harengus (Atlantic herring): 105900194
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Entry
105900194 CDS
T09045
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105900194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105900194
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
105900194
Ubiquitin system [BR:
char04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
105900194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
SH3-C_UBE2O
UQ_con
Motif
Other DBs
NCBI-GeneID:
105900194
NCBI-ProteinID:
XP_031419803
UniProt:
A0A6P8EU89
LinkDB
All DBs
Position
26:complement(5988959..6015368)
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AA seq
1355 aa
AA seq
DB search
MAEPVASAAKDAASPSPTPAFSPAASPGSEPPSMALSPSAGGSERLLFTHDLVSGRHRGS
LRFGLVVMIHGEDDFDSDSDIDVDIADDGGGKGGGGCGLCGGPGNADTENGAADSRTRLL
GRGFVRVQWYPNGVKQDVHETKLKLEDRSIVPRDFVRRLNSNDKQCGIVTNINIECAVKL
VGTNCVLYPVSSRDLQHIWTFMYGDYIVYDFWLGKVYDLSNNIILKLSNGARCSMSEEDG
SKLYDVCPHVSDNGLFFDEAYGFYPGQVLIGPSKVFANVQWLYGVKPVLSKKTKFRVVVE
EVQVVELKVTWITKSYSPKGSDSVYPPPSTITQENLCKVKRLGYYDHTQRQLGDRALYVF
PSKVDATRITCEGPEGTPVHPEDPVCRRLKRIFKKDLGRKTTEGADLHGNRLQSGDKPDH
IEGEKQDGIGEAPLVPRCPNNGPVERPDGVTDKEVEAGEDGQLGDLDTDGEADDTDDTSS
ITSSASSTASLQSMGGMPPNRKKSIPLSIRNLKRKHKKKRTKFSREFKQGDRVAVEVVST
VTSSDVMWKDGRLEAGIRSNDLIPIQHLDNHEFCPGDYVVDKRSSASQDPGLYGVIQSGD
HKGRTCGVKWIKLNAAGDDVEVIGEEEDVSVYDIADHPDFHFRTTDIVIRIVNPDQEDCE
NDSTSVGHVSRVDVSSKVEVVWADNSKTIVLPQHLYNVESEVEETDYTSVEGSSSGASSE
EWEDESDSWETVEEEHKEDPALTPTAAAALPETMPLTPVSGDAPGAIAATATPDPSASTT
PAAEEKSGKEGTARGLRELKEALKILESLKNMTVEQLWTGSPTSPTSAEPSATTTTASAA
ATTPVSEGTKPTKEKRFLDDIKKLQENLKKTLDVCAIVEEARKEGAVEEERPAATTTATT
QPQAEPQTPVRSEWPSDTPVLCQQSGGKPGVTFTSAKGEVFSVLDEAPESHTFKIMEFQP
AEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFAALIKGPTRTPYEDGLFLFDIQL
PNIYPAVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVLISI
QGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIKMVQSMSTMLQHPVEVFQQEIQ
EHFSSCGWRLVHRIESWLELDGAVVERGGKGAGGGGGGGGAGGGGGGGGGGGGFRDREPL
EEIPHALAHSSPSKQDLKEEDLEDSGLSPSTTTGPGGSSGSTSALQQDLSQSSDGEVLVT
GSASGGAGDGVVLTQGSGGASQASGKASQESQPTVRPKKRRKSYRSFLPERSGYPDIGFP
LFPLSKGFVKSMCGVLLQYRATLIAAGICEHREDK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacccgtggcatcggcggctaaagacgcagcatccccatccccgactccagcc
ttttccccggcagctagcccaggatctgagcctccttcaatggcgctctctccttcagca
ggaggttctgaacgactccttttcacccacgacctagtctcaggtcggcatcgtgggtcg
ctgcgatttggccttgtggtaatgatacatggcgaggatgattttgactccgattcagac
atagatgtggacatagccgacgatggcggaggtaaaggaggtggtggctgtgggctatgt
ggtggccccggtaacgctgatacagagaacggtgctgcggactcgcggacacggcttctg
ggaagaggtttcgtacgggtgcagtggtatccaaatggagtaaagcaagacgttcatgaa
accaagctcaaacttgaagatcgatccatcgtgcctagggactttgtacgacgcttgaat
tccaatgataaacagtgtggcatagtgaccaacattaacattgagtgtgcagtgaaacta
gttggaaccaactgcgtcctgtatcccgtcagtagtcgagacttgcaacacatatggacg
ttcatgtatggggactacatagtctatgacttctggttggggaaagtgtatgacttgagc
aacaacattatcttgaagctttccaacggggcaaggtgttcgatgagtgaggaagatggg
tccaaactctatgacgtttgtcctcacgtcagcgacaacgggctcttcttcgacgaggcg
tacgggttctacccaggccaagttttgattggtccgtcgaaggtttttgctaacgtgcag
tggctctatggtgttaagcccgtgttgagcaagaagaccaagttccgggtggtagtggag
gaggtgcaggtggttgagctgaaagtgacatggatcaccaagagctactcccccaagggc
tccgacagcgtctaccccccgccctccaccatcactcaggagaacctctgcaaagtgaag
cggctgggttactacgaccacacgcagaggcagctgggcgaccgggcgctctacgtgttc
ccatccaaggtggacgccacccgcatcacctgcgaggggccagaggggacgccagtgcac
ccagaagaccccgtctgcaggaggctgaagcggattttcaagaaagacctggggaggaag
acaacggagggtgcagatttgcatggcaaccgccttcagtcaggagacaaacctgaccac
atagagggtgaaaagcaagatgggataggggaggcccccttagtgccccgttgccccaac
aacggtcccgtagagcgacccgacggggtcacggacaaggaggtggaggccggggaggat
ggccagctgggagacctggacacggacggcgaggcggacgacacggacgacacgagctcc
atcacgtcctcggccagctccacggcctcgctgcagagcatgggcggcatgccccccaac
cgcaagaagagcatcccactgtccatccgcaacctcaagaggaagcacaagaagaagagg
accaagttctcccgcgagttcaagcaaggtgatagggtggcggtggaggtcgtctccacg
gtgacctcgtctgacgtcatgtggaaggacggccggctggaggcgggcatccgttccaat
gacctcatccccatccagcacctggacaaccatgagttctgcccaggggactacgtcgtg
gacaagcgctcttccgcttctcaagacccagggctctatggggtcatccagtcaggcgat
cataagggcaggacgtgtggcgtcaagtggatcaaactcaacgctgcgggcgatgacgta
gaggtgattggtgaagaggaggatgtcagtgtttatgacatcgctgatcatccagacttc
catttccgcaccacggatattgtcatcagaatagtcaaccctgaccaagaggactgcgaa
aatgatagtacgtcagtgggtcacgtgtcgagagtggacgtcagcagtaaggtggaggtg
gtttgggctgacaactccaaaactatcgtactgccacagcacttgtataacgtggaatcg
gaggtggaggagacggactacacctcagtggagggcagcagcagcggcgcctcctcagag
gagtgggaggacgagagcgacagctgggagaccgtggaggaggagcataaggaagacccg
gccctcactcccacggccgccgccgctctccccgaaaccatgcccctgacgccggtcagc
ggggacgccccaggggccatcgccgccaccgcgacccccgacccgtcggcctctacgacg
ccggccgcggaggagaagtctgggaaggagggcacggcccggggcttgagagagctgaag
gaggccctgaagatcctggagagcctgaagaacatgaccgtggagcagctgtggaccggc
tcacccacctccccgacctcggcagagccctcagccaccacgacgaccgcctctgccgcc
gccaccacgccggtgtccgagggcaccaagcccaccaaggagaagcgtttcctcgacgac
atcaagaagctgcaggagaacctgaagaagacgttggacgtctgcgccatcgtggaggag
gcacgaaaagagggcgccgtcgaggaggagaggcccgccgcgacgacgaccgccaccacc
cagccgcaggcggagccgcagacgcccgtgcgctcggagtggcccagtgacacgccggtg
ctgtgccagcagagtggcggcaagcctggcgtcaccttcaccagtgccaagggagaggtg
ttctccgtgctggacgaggcaccagagagtcacacttttaagataatggagttccagccg
gccgaggccaagaagttcttcagcaccgtgaggaaggagatggctctgctggccacctcc
ctgcctgatggcatcatggtcaagaccttcgaggaccgcatggacctgttcgctgctctg
atcaagggccccacacgcacaccctacgaggacggtctcttcctgttcgacattcagctc
cccaacatctacccggcagtgccccccctttttcgctacctgtcccagtgcagtggccgt
ctaaatcccaatctctatgacaacggcaaggtctgcgtcagcctgctgggcacctggatt
ggcaagggcacggagagatggaccagcaagtctagtctgctacaagtgctcatctccatc
caaggtctgatcctggttaatgaaccttactacaacgaggctggcttcgacagtgacagg
ggcctgcaggaaggctacgagaacagccgctgctacaacgagatggcgctgatcaagatg
gtgcagtccatgagcaccatgctgcagcaccccgtggaagtcttccagcaggagatccag
gagcacttcagctcctgcggctggcgcctggtgcaccggatcgagtcctggctggagctg
gacggggccgtggtggagcgcggaggcaaaggggccggaggaggaggaggaggaggaggg
gcgggaggtggaggaggaggtggaggaggaggcggcggcttccgcgaccgagagccgctg
gaggagatcccccatgcactggcccacagcagccccagcaagcaggacctgaaggaagag
gatttggaggactcgggcctcagcccctcaactaccacgggacctgggggctcgtccggg
agcacttccgccctgcagcaggaccttagccagagctcggacggtgaggtcttggtgacc
gggagcgccagtggtggggcaggtgatggggtggtgttgacgcagggttcgggcggtgcg
tcgcaagccagcggcaaggcatcccaggagtctcagcccacggtcagaccaaagaagcga
agaaagagctaccgcagcttccttcctgagcgcagtggctacccggacatcggcttccca
ctattccccctctccaagggctttgtgaagagcatgtgtggggtgttgctgcagtatcga
gccaccctcatcgctgctggcatctgcgagcacagagaggacaaataa
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