Clupea harengus (Atlantic herring): 105900215
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Entry
105900215 CDS
T09045
Symbol
cacng5a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 5a isoform X1
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105900215 (cacng5a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105900215 (cacng5a)
04261 Adrenergic signaling in cardiomyocytes
105900215 (cacng5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105900215 (cacng5a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105900215 (cacng5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
Claudin_3
DUF4064
DUF6336
DUF716
Motif
Other DBs
NCBI-GeneID:
105900215
NCBI-ProteinID:
XP_031419938
Ensembl:
ENSCHAG00000022869
UniProt:
A0A6P8EUK0
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Position
26:6958393..6983465
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AA seq
289 aa
AA seq
DB search
MSLCGRKALTLLSSVFAVCALGLLGIAVSTDYWLYLEEGVILPLNQSTEVRMSLHSGLWR
VCFLADTPVPVQELPTGKPGEDKGRCFTIEYIMPTNVQMTSESTVSVLKMIRSATPFPLV
SLFFMFIGFVLNNIGHIRPHRTILAFVSGIFFILSGLALVVGLVLYISSINDEMLNRTKT
NDAYFSYKYGWSFAFAAISFLLTEAAGVMSVYLFMKRYTAEEMYRPHPGYYRPRLSNCSD
YSGQFLHPEAWPRGRSPSDLSSEASLQMNSNYPALLKCPEYDQMSSSPC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgcggcaggaaggccctgacgttgctaagcagcgtgttcgcggtgtgcgcc
ctgggcctgctgggcatcgccgtcagcactgactactggctctacctggaggagggcgtc
atcctgcccctcaaccagagcaccgaggtacgcatgtccctgcactcaggcctctggagg
gtctgcttcctggcagacacacctgtccctgtgcaagagttacccaccggtaaaccaggg
gaggacaagggccggtgcttcaccatcgaatacatcatgcccaccaacgtccagatgacc
tcagagtccaccgtcagtgtgctgaaaatgatccgctccgccacgcccttccccttggtc
agcctcttcttcatgttcatcggcttcgtcctgaacaacatcgggcacatccggccgcac
cgcaccatcctggccttcgtctctggcatcttcttcatcctctcaggtctagcactggtt
gttggcctcgtgctctacatctccagcatcaacgatgagatgctgaacaggaccaagacc
aacgatgcctacttcagctacaagtacggatggtccttcgctttcgcagccatctccttc
ctgctcacagaggctgctggggtgatgtccgtctacttgttcatgaagcgctacacggcc
gaagagatgtaccggccgcacccgggatactaccggccgcgcctgagcaactgctccgac
tactcgggccagttcctccacccggaggcctggccgcgcggccgcagcccctcggacctc
tccagtgaggcctcgctccagatgaactccaactaccccgccctgctcaagtgccccgag
tacgaccagatgtcctcctcgccctgctga
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