Clupea harengus (Atlantic herring): 105900217
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Entry
105900217 CDS
T09045
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105900217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105900217
03009 Ribosome biogenesis [BR:
char03009
]
105900217
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105900217
Spliceosome [BR:
char03041
]
Complex A
U1 snRNP components
U1 related factors
105900217
Complex B
105900217
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Helicases
105900217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105900217
NCBI-ProteinID:
XP_031419388
Ensembl:
ENSCHAG00000019087
UniProt:
A0A6P8ET49
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MPGYSDRDRGRERGSYGGAPRFGGSRNGPPQGKFGNPGERLRKKHWNMDELPKFEKNFYK
EHPDVTRKSVQEVEMYRRTKEVTLKGRECPKPIMKFHEASFPNYVMDVIGKQSWTDPTPI
QAQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPFLEHGDGPICLVLAPTRELA
QQVQQVAAEYGRASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQI
NVGALQLSANHNILQIVDVCNDGEKDDKLLRLLEEIMSEKENKTIIFVETKRRCDELTRR
MRRDGWPAMGIHGDKSQQERDWVLNEFKYGKACILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQANDLISVLREANQAINPKLLQMAEDRGG
RSRGGRGGYKDDRRDRYSGGRRDFGNFRDRDRDSDRGYGSGPKTQNGGYGGGNTYDKGST
NTGNYSNGYNNGQANSYGGGAGNPVAAFQNQNFPAQPFGGNQAAGQNGMSHPPFPFTPQA
PPQQPPQPMVPYPMPPAFPQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattctgacagagaccgtggtagggaaagggggagttatggtggcgcacct
cggttcggtgggagccgaaatggaccgcctcagggcaaattcggtaaccccggcgaaaga
ctgcgtaaaaagcactggaacatggacgagctcccaaagttcgagaagaacttctacaag
gagcatcctgacgttacaaggaaatcagtgcaagaagttgagatgtataggaggactaaa
gaggtcaccctgaagggcagggaatgtcccaaaccaatcatgaaattccatgaagccagt
tttcccaactacgtcatggatgtgattggaaaacaaagttggacagaccccacccccatc
caggctcagggctggcctctggccctcagcggcaaagacatggttggcatcgcccagaca
ggatctggaaaaacattggcttacttgctgccagctattgttcacatcaatcaccagcca
ttccttgaacatggcgatggcccgatttgtctggttctggcgccaacccgtgaactggca
cagcaggtccagcaggtggctgctgagtacggccgagcctcacgtctgaagaccacgtgc
atctatggcggcgcccccaaaggaccgcagatccgtgacctggaaagaggggtggagatc
tgcattgccacgccaggtcgtctcattgacttcctggaggtcgggaagaccaacctgcgg
cgctgcacgtacctggtgctggacgaggctgaccgcatgctggacatgggcttcgagccc
cagatccgcaagatcgtggaccaaatcagaccggaccgacagactctgatgtggagcgcc
acctggcccaaagaggtgcgtcagctggcggaggacttcctgaaggagtacgtgcagatc
aacgtgggcgccctgcagctgagcgccaatcacaacatcctgcagatcgtcgacgtctgc
aacgacggcgagaaagacgacaagctcctgaggctgctggaggagattatgagcgagaag
gagaacaagaccatcatctttgtcgagaccaagaggcgttgtgatgagctgacgaggaga
atgaggcgagatggttggccagcaatgggcattcatggagacaagagccaacaggagaga
gactgggtgcttaatgaattcaaatatggcaaggcatgcatccttatcgccacagacgtc
gcctcccgcggtctagatgtggaggatgtgaaatttgtcatcaattatgactaccctaac
tcatccgaggactacatccaccgcatcggcaggacggcccgcagtcaaaagacgggcacg
gcctacacgttctttacgcctaacaatatgaggcaggccaacgacctcatctctgtcctc
cgcgaggccaaccaggccatcaaccccaagctcctgcagatggcggaagacagaggaggt
cgttccagaggcggcagaggtggctataaggacgaccgccgcgataggtattctgggggg
agaagggattttggtaacttcagggatagggatagggatagcgataggggctacggtagt
ggaccaaagacgcagaatggtggctatggcgggggcaacacatatgacaagggcagcacc
aacaccggtaactacagcaacggttacaacaatggacaggctaacagctatggcggcggc
gccggcaacccggtggccgccttccagaaccagaacttcccggcccagccatttggcggg
aaccaggcggctggccagaacggcatgagtcacccgccattccccttcaccccacaggcg
cccccccagcagcccccacagcccatggtaccctaccccatgcctcccgcgttccctcag
taa
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integrated database retrieval system
