Clupea harengus (Atlantic herring): 105900320
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Entry
105900320 CDS
T09045
Symbol
rin1a
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105900320 (rin1a)
Membrane trafficking [BR:
char04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105900320 (rin1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
105900320
NCBI-ProteinID:
XP_031428569
Ensembl:
ENSCHAG00000026730
UniProt:
A0A6P8FQD1
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Position
8:16043323..16049623
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AA seq
669 aa
AA seq
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MGVEFWSSQLNFRGPRNGPPPVAEAPPPPALTPEDCATPIENPTLFEEFCPIRTRSPREL
DIGTGQGALCFINPLFLQDQPIRSALHRRHHFKRSIKVRVSTENSSPLSPPVAPPPPPPL
LAKAKKQGKGVRQRAAEAEEARDATQDTTAAPQEVSDYLQPSVALPKKTRTLVSPALSPT
AEEDDYQMPKALFRSCGQRGEEEKEEEDMGEDEDAGLVLEQRRAPSLSELESSSSISSLD
EPDESPERPPLSRGTSAPAAPSPSPPPQPVSALRKMSAAFVSFFMPEKRVARMVEELSHD
RRLAFGGLVQDFLRQQREALKLLKLTSAMEMLQGIRQFLSQAKTFLLDCGELEPPIETLL
PEDIKEQALEKAMFRCVLKPLKAQVDGALSTLHDRDGSSQRMAESLQRARERSPLELFGV
QVNVPDTQGIEKVRQKLSMLQRAYSPIDKVLLILQVCKLIYKAMNKDKRKEFGADDFLPV
LSYVIVQCNMPELLFEVEYMMELLDTPWLTGEGGYYLTSVYASLCLIQSQPSTPPTSGLT
REARESLREWSHRRSNDSKRGRSRKHQRFVKVLFQNEESCSVKTLQWNNGVSVEDLAQLC
AAKFGTSEPDDYALFWRKEGEAEPLPPDSKMEDFLALGGSGSPLIYQLQSPDAQSRKLTR
KGAVDLVES
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagagttctggagctcgcagctgaacttcaggggccctcgtaatggtcctcct
ccagtcgccgaggcgccgccgcccccagctctcacgccggaagactgcgccacacccata
gaaaaccccaccctgtttgaggagttctgtcccatccgcacacggagccccagagagctg
gacatcggcaccggccaaggagctctgtgcttcatcaaccccctcttcctgcaggaccag
cccattcgcagcgcactgcacagacgtcatcatttcaagcgcagcatcaaagtgcgcgtc
tccaccgagaactccagccccctctcacctccggtcgctccgccccccccgccgccgctg
ctggccaaagccaagaagcagggcaagggtgtgagacagagggccgctgaggcagaggaa
gccagagacgccacgcaggataccacagcagcaccacaggaggtctcagactacctgcag
cccagtgtggctctaccaaagaagacacgcactctggtgtcccccgctctctcaccgaca
gcagaggaggacgactatcagatgccaaaagctctattccggagctgtggtcagagagga
gaggaagagaaggaagaggaagacatgggtgaagatgaagacgcagggctggtgttagag
cagaggcgcgctccgtccctcagtgaactggagagcagcagctccatcagcagcctggac
gagccggacgagagcccagagcgcccgcccctctcccgggggaccagcgccccggccgcc
cccagtccctcacccccaccccagcccgtctctgccctgcgcaagatgagcgccgccttc
gtctccttcttcatgccagagaagcgtgtggcgcggatggtggaggagctgtcccacgac
cggcgcctggcgttcggtggcctcgtgcaagacttcctccgccagcagcgggaggccctg
aagctgcttaagctgacctctgccatggagatgctgcagggcattcgccagttcctctcc
caggccaagacattcctcctggactgtggggaacttgagccccccatcgagaccctgctg
ccagaggatataaaagagcaggctctggagaaggccatgttccgctgtgtgttgaagcca
ctgaaggcccaggttgatggagccctcagtaccctccatgaccgagatgggtcttctcag
cgtatggcggagagcctccaaagggcaagggagaggtcacctctggagctttttggggtg
caggtaaacgttcccgacacccagggcatagagaaggtacggcagaagctaagcatgcta
caacgcgcctattcccccatcgacaaagtcctgctgatactgcaggtgtgcaaactcatc
tacaaagccatgaataaagacaaacggaaggagtttggtgcagatgacttcttgccagtc
ctctcctatgtgattgtacagtgtaacatgccagagcttctgttcgaagttgagtacatg
atggaactgttagacaccccgtggctcactggagagggtgggtactatctgaccagcgtc
tacgccagcttatgcctgatccagagtcagcccagtactcctccaaccagcgggttgacc
cgcgaggcccgagagtccctgagggagtggagtcaccgccgaagcaatgactccaagaga
ggaagatccaggaagcaccagaggtttgtgaaggtactcttccagaatgaggagagctgc
tcggtaaagactcttcagtggaataacggggttagtgtggaggacttagctcaactttgt
gccgccaaatttggcaccagtgagccagacgactacgctctcttctggagaaaggaaggg
gaggctgagcctcttccccctgattccaaaatggaggactttctggccttgggcggcagt
ggatctcccctgatctaccagctccagagccctgatgcccagtcacggaaactgaccaga
aaaggtgcggtagacctggtggagtcctaa
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