Clupea harengus (Atlantic herring): 105900343
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Entry
105900343 CDS
T09045
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105900343 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105900343 (irf6)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
105900343 (irf6)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105900343 (irf6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
105900343
NCBI-ProteinID:
XP_012683086
Ensembl:
ENSCHAG00000007030
UniProt:
A0A6P8FHZ1
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All DBs
Position
5:2734315..2741902
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AA seq
478 aa
AA seq
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MSGQPRRVRLKPWLVAQVDSGNYPGLVWLDREIRRFQIPWKHATRHTPQHEEENTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYNVCDIPQPL
SNPGSTGSVPWEDDADEDEEDVADTPEPPPPYPKQNGTSSSPLCPPVWTPPGSVSPMQPP
SCPPFKEEPVEMDVQPSPLNMHPPPIAMPPPSLPDAMMFQTPETWISSLPMTDLEVCFRY
RGKEVCPTFTVSNPLGCRLFYGDLGPMVNQEELFGPVSLEQLRFPASEHITNEKQRLFTS
RLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPAAPNLIERQRKVKLFCLESFL
GGVIAHQRGISASPPCFDINLCFGEEWPDGRPNERKLIMVQIVPVVARMISEMFSGDSTR
SFDSGSVRLQISIPDIKDNIVSHLKQLYSLLQTHQPPGEGWTMSPGSGMQLPPTLQAQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcagccacggcgtgtgcggctgaagccctggcttgtggcccaggtggacagt
ggcaactaccctggtctggtgtggctggaccgtgagatcagacgcttccagatcccctgg
aagcatgccacccgccacaccccccaacatgaggaggagaacaccatctttaaggcctgg
gcggtcgagaccggaaagttccaggaaggcgtggatgagccggaccccgccaaatggaag
gcacagctgcggtgtgcccttaacaaaagccgtgaattcaaccttatctacgatggcacc
aaagaggtgcccatgaacccactcaagatctacaatgtctgtgacattccacagcctctt
agcaaccccggttccacaggctctgtgccttgggaggatgatgctgatgaagatgaggag
gatgttgcagacaccccagaaccccctccaccctaccctaaacagaatggcacaagctcc
tcccccctgtgtcctcccgtctggacgcctccagggtccgtgtcccccatgcagccgccc
agttgcccccctttcaaagaggagccggtggagatggacgtgcagccctcgcccctgaac
atgcacccccctcccatagcgatgcccccgccctctctgcctgacgccatgatgtttcag
accccggagacgtggatcagctccctgcccatgactgacctggaggtgtgtttccgctac
cggggcaaagaggtgtgcccaaccttcactgtgagcaacccgctgggctgccgcctcttc
tacggtgacctgggccccatggtgaaccaggaggagctgttcgggcctgtgagcctggag
cagctgcgcttccccgccagtgaacacatcaccaacgagaagcagcggctcttcaccagt
cgcctgctcgacgtcatggaccgcggcctcatcctggaggtcagcggccacgacatctac
gccgtgcgcctctgccagtgcaaggtgtactggtcggggccgtgcgcgcccaaccccgcc
gcgcccaacctcattgagcgccagcgcaaggtcaagctcttctgcctggagtccttcctc
ggtggtgtgattgcccaccagcggggcatatctgccagcccgccatgttttgacatcaac
ctgtgttttggagaggagtggcctgatggcagaccaaatgagaggaagctgatcatggtg
cagattgttccagtggtggcgcgcatgatcagcgagatgttctctggggacagcactcgc
tcctttgacagtggcagcgtgcgcctgcagatatccatccccgacatcaaggacaacatc
gtgtcgcacctcaagcagctctacagcctgctgcagacccaccagccccccggggagggc
tggacaatgtcccctggaagcggcatgcagctcccccccactctgcaggcccagtag
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