Clupea harengus (Atlantic herring): 105900352
Help
Entry
105900352 CDS
T09045
Symbol
robo3
Name
(RefSeq) roundabout homolog 3 isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105900352 (robo3)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
ROBO family
105900352 (robo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_3
Sp38
Izumo-Ig
CBX7_C
Motif
Other DBs
NCBI-GeneID:
105900352
NCBI-ProteinID:
XP_031428046
Ensembl:
ENSCHAG00000016318
UniProt:
A0A6P8FX28
LinkDB
All DBs
Position
8:complement(17669811..17737393)
Genome browser
AA seq
1417 aa
AA seq
DB search
MEFHPTLDALPILFALISITVGSRPRLEDAPPRILEHPSDLIVSKGEPATLNCKADGRPT
PTVEWYKDGERVETDREDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEG
VSRNASLEVAILRDDFRQSPSDVVVAAGEPAVMECIPPRGHPEPTISWKKNNVRVNDKEE
RITVRGGKLMISNTRKSDAGMYVCVGTNMVGERDSDPAELVVFERPMFVRRPVNQAVLAD
DTVDFLCEVQGDPTPTVRWRKEEGDLPRGRSEIRSDSSLRLTNVRAEDEGTYTCVSENSV
GKTEATGILQVHVGSSLPPQIVVRPRDQISAQGRTVTFLCGTKGNPPPAVFWQKEGSQIL
LFPSQPPSESGRFSVSLSGELTIVDVRGEDSGFYICQAISVAGSILTKALLEVEDVPSDR
VPPIIRQGPANQTLAPGATAQLQCHVMGNPLPSIQWEKDSQRILANDERISLMENGTLQI
INLQETDSGTYTCVASSSSGDTSWSGVVTVKESVDSSMGQASEPIQLPGPPQKPVVTDVT
LNSVTLTWQPNAHEGGAAVTSYIIEAFSQSAGSTWQTVADLVRQEKHTVGGLFPNTVYLF
IVRAVNAYGLSDPSPISEPVRTQDLSPTGQGVDHRQVQRELGEVAVLLQDPLVLSASSAQ
LWWTVDRQSQYIQGFRLLYRPSGGSWLMQDVKAAPERSAVLTDLLKGTEYEIKVRPYFNE
FQGMDSRVVVVHTPEEVPSAPPQAVTVSTLNLGNSSSISVSWQPPPADAQNGLIQEYKIW
CLGNDTLTRYHINQTVDGRVLSTVLKGLLPGVWYQVEVAAVTSAGVGTRSEAVPIFIKHP
AEPPVVPGGPDENVSLAEQITDVVKQPAFIAGIGGACWVILMGFSVWIYCRRKKRKELSH
YAASFAYTPAVGFPHGEGSGVNGRPGVLGGGMGNYPWLADSWPTSNLMHSGKDSVNCCTA
KHDSAERYYNEVGISNYLNQTEKYSTGSNEGPIYSTIDPTSEDLRSFSAPYSQHATPYAS
TPIMPFSAQGPVSPQQDAAHWMPQPSTSGAQYAQPDRSKTDNAAKHSKQKSMGKAVKTPS
LTWMEPLPPPPPSTGETEQYADELDPDHDDHDIQDLGSDEEEEWCPPLPERTYLMDGTDE
GSHGHGHGPGPGPCPPLRTDASSPTTSYSHQSTATLTPSPRDEGRLGHDIPRLHHLDAPP
QTRRLPCGPVPIPRAPSPPLTQSNPNLSANHEGPDMGTPPRSAHRRDLSQGATLSADNIS
ATTPGRTRAAPQDNSQSPAGPKSRVKKKTSKSGQYRREAIQGDLPPPPEPPPEERILDTP
SGTLEYGQTSLDRDGSSHGSSMERRDHSAPNRKSAGQRRKEDEDMIPYTKPNLHLARGQM
SSNCSTTGSSSSRGSSGSRGHSLAKQRSEVPAEPGEP
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcatcccacattagatgctctaccaatactatttgcactcatcagtatcacc
gtaggatcccgtccgaggcttgaggatgctcctccgcggatcctggaacacccgtccgac
ctgatcgtgtccaagggcgagccggccaccctcaactgcaaggcggacggacggcccacg
cccacggtggagtggtacaaggacggcgagcgggtggagacggaccgcgaggacccgcgc
tcccaccgcatgctgctgcccagcggctcgctctttttcctgcgcatcgtgcatggccgc
cgcagcaagcccgacgagggcgtctacgtgtgcgtggcacgcaactacctaggagagggt
gtcagccgcaacgcctcgctggaagtagccatcctgcgtgatgatttccgtcagagcccg
agtgacgtggtggtggccgcgggcgagccggcggtgatggagtgcatcccgccccgcggc
caccccgagcccaccatctcctggaagaagaacaacgtgcgcgtcaacgacaaggaggag
aggatcacggtccgtggtgggaagctaatgatctccaacacgcggaagagtgacgcaggg
atgtacgtgtgtgtgggaacaaatatggtgggcgagagggacagtgaccctgcagagttg
gtggttttcgagcgtcccatgtttgtacgcagaccggtgaaccaggcagtgctggcggat
gacactgtggacttcctgtgcgaagtgcagggcgaccccacccctaccgtacgctggcgc
aaagaggagggggacctgccacgtgggagatccgagatcaggagtgacagcagcctgcgt
ctgactaatgtgcgagccgaggacgagggcacgtacacctgcgtgtctgagaacagcgtg
gggaagacagaggccaccggaatactccaggtccatgtgggctcatctcttcctccccag
atcgtggtgcgtcctcgggaccagatctcagcccagggtcgcaccgtcaccttcctctgt
ggcaccaagggcaaccctcccccagccgtcttctggcagaaggagggcagccagatcctg
ctgtttcccagccagcccccatcagagtcggggcgcttctctgtgtctctgagcggcgag
ctgaccatcgtagacgtgcgcggcgaggattctgggttctacatctgtcaagccatcagc
gtcgctgggagcatcctcaccaaagccttgctggaggtggaagacgtgccatcagaccga
gtgcctccgatcatccggcaagggccagccaatcagacgctcgcacctggagccacggcc
caactgcagtgtcacgtgatggggaaccctcttcccagcattcagtgggagaaggacagc
caacggatcctggccaacgacgagcgcatcagcctcatggagaacggcaccttacagatc
atcaacctgcaggaaacggactcggggacctacacctgtgttgcctccagctcgagcgga
gacacaagctggagtggagttgtcaccgtgaaagagagtgtcgactcgtccatgggccag
gcgtcggagccgatccagcttcccggtcctccccagaagcccgtggtgacggacgtgacc
ctgaacagtgtgaccctgacctggcaacccaacgcacacgagggaggagccgccgtcacc
tcttatattattgaggccttcagccaatcggcgggcagcacctggcagacggtggcggac
ctggtgcgtcaggagaagcacacggtgggcggcctcttccccaacacggtctacctgttc
atcgtgcgcgccgtcaacgcctacggcctcagcgaccccagccccatctctgagcccgtg
cggacgcaagacctgagtcccacaggccagggcgtggaccacaggcaggtgcagcgggag
ctgggggaggtggccgtgctcctgcaggatcccctggtcctcagcgcctccagcgcccag
ctctggtggacggtggaccggcagtcccagtacatccagggcttccggctcctgtaccgg
cccagtggaggctcctggctgatgcaggacgtgaaggccgcaccggagcgcagcgccgtc
ctaacggacctgctgaagggcacggagtacgagatcaaggtccggccctacttcaacgag
ttccagggcatggacagccgcgtggtcgtggtgcacacgccggaggaggtgcccagtgcc
cctcctcaagctgttaccgtgtcgacgcttaaccttggcaacagctccagcatcagcgtt
tcctggcagcctccccctgctgacgcgcagaacggactcatccaggagtacaagatttgg
tgcttgggcaacgacactctgactcggtaccacatcaaccagacggtggacgggcgcgtc
ctctccacggtgctgaaggggctgctgcccggcgtctggtaccaggtggaggtggcagcc
gtcaccagcgccggcgtgggcacccgcagtgaagctgtacccatcttcatcaaacaccca
gcggagccaccggtggtgcccggcgggcctgacgagaacgtgagtctggcagagcagatc
acagacgtggtgaagcagccggcgttcatcgcgggcatcggcggtgcatgctgggtaatc
ctcatgggcttcagcgtgtggatctactgccgccgcaagaagaggaaggagctgagccac
tacgccgcctccttcgcctacacccccgcagtcggttttccccatggagagggttcggga
gtcaatggaaggcctggcgttctggggggcggcatggggaactacccctggctggccgac
tcgtggcccacctccaacctcatgcacagcggcaaggactccgtcaactgctgcacggcc
aaacatgactcagcagaaagatactacaatgaggtgggcatctccaactacctgaaccag
acggagaagtacagcacgggctccaacgaggggcccatctacagcaccatcgaccccacc
agtgaggacctgcgcagcttctccgcaccctactcccagcatgccacgccctacgccagc
actcccatcatgcctttctccgcacagggccctgtcagcccccagcaggatgccgcccac
tggatgccccagccgagcacctcaggggcgcagtatgcccagcctgaccgctccaagaca
gacaacgcagccaaacacagcaagcagaagtcgatgggtaaggcggtgaagactccctct
ctgacctggatggagcctctgcccccgccgccgccctcaacaggggagacggagcagtat
gccgacgagctggatcccgaccacgacgaccacgacatccaagacctaggttccgacgag
gaggaggaatggtgtccgccgttgcccgagcggacctacctcatggacggcacggacgag
ggcagccacggccacgggcacggacccggccccggaccctgcccacccctgcggacggac
gcctcgtccccaaccacctcctacagccaccagtccacagccacgctcaccccctccccc
cgggacgaggggcggctggggcacgacatccctcgtctgcaccacctggatgcacccccc
cagacacgacggttgccgtgtggaccggtaccgatcccgcgcgcccccagcccacccctg
acccagtccaaccccaacctgtcagccaatcacgagggccctgacatgggcacgccaccg
cgctcggcacaccggcgagacctgagccagggggcgacactcagtgctgacaacatcagc
gccaccacgccaggcaggacacgcgccgctccccaagacaacagccagtcccctgccgga
cccaagtcacgagtgaagaagaagacctccaagagcggacagtacaggagagaggcgata
caaggagacctcccccctcccccggagccccctcccgaggagcggatcctggacacccca
tcagggacgctggagtacggacagacatccttggacagagacggcagctcccatggtagc
tccatggagaggagagaccacagcgcccccaacaggaaaagcgcaggacagcgacgcaaa
gaagacgaagatatgattccttacaccaagccaaacctccacctcgcccggggacagatg
tccagcaactgttccacgacgggcagctcctcgtcgcgggggtcctcgggttccagaggg
cacagcttagccaagcagcgcagcgaggtaccggcagaaccgggggaaccgtga
DBGET
integrated database retrieval system