Clupea harengus (Atlantic herring): 105900359
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Entry
105900359 CDS
T09045
Symbol
robo4
Name
(RefSeq) roundabout homolog 1
KO
K06784
roundabout, axon guidance receptor 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105900359 (robo4)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
ROBO family
105900359 (robo4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
105900359
NCBI-ProteinID:
XP_031428045
UniProt:
A0A6P8FXB7
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Position
8:17647266..17666683
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AA seq
1158 aa
AA seq
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MQPGTWLLWASWLLTWAEASRQCQCQCTCSPDATSEVKAAKQGKGHIHHHHGGHQNLRHR
HRGSRRRGSKSQAEEIPPQIVHQPSDVVVKVGSPATLSCRASGNPEPTIEWLRNGQPLDP
DRLEVHSRPIVLPGGSIFFLSVVPGRKSHEGVYACVASNSAGNATSRNASLHVAVLRDEF
RVQPSNVEVAVGEVAIMNCSPPLGQPEPNVSWKKNGMLINSTDDHYTVLNGKLIIAPTQK
SDSGVYICVASNTVGVRESQAARLAVLVKPVLVLKPQDVTVRVGEAAHFFCEVDGDPMPA
VEWSREPGPLPNGRYLVNPDQSLQIHYVTEQDSGKYTCTAVNEMGVTTASAVLYIEDASN
ARQRDLHKELSAMRAELQSVAIMAPSSNVSLVQWKLQSLPAQPQYLDGFEVLYRSLLPAS
SDWAAQKVPLPSLQAPVGPLKRGYKYEFKVRPYGSGLYGKESNTRHLRVPEMVPSAPPQG
LSVTMPVDRNDTVLLSWGPPPHDAHNGIIQGYQVWCVQSDDQQFFNWTVDSGTHSLEIGL
LHPGRQYWVRVAALNGAGVGVKSDPHRLLIENNRRVAPPLPDVGALPRVLAVVQHPVFIG
SVGVLLWCFLMVAAVCLYRRHARNSGLGHKHHKSSGLYRLASEDLIIKHRMAAPDSPWIS
GAWRPALCSKPYQDLWAQGQESPNPSLSKSTLPITAKKDPGHLETVVPIVPDSCGVYGTF
YVDLTGKNLKTFNSPARRCKMPHYHSDQNSETLIIPQPMSRNTTAWDGQAVQWKRPLPAQ
PNMGVLKESWEKNSKRELHAVKSAPLAPMSQQARPAGSVASVTNQRLSHQPPGGFPECLK
LAGSPRMVHYSASLHLVDVAPPQPSPPRCMDDTHSLSSEEGFSRSTKLTEDMGSLQSFCT
ASAMRGAATASSICPSYPNRTYSRLSTASFSLSAGPSMDEDLDLDATLSTQDSMQYPEMR
PRAARGRVLSDNLTPRPFSPTPTFGYICGPSEVEEGGERGGPDGRRARLRSTPSSCCSEW
EGSLWNAWGSVSEGNMPSARTSIISSSDCSFMNDANFARVLALTAESMNGATFSDFSPSG
SPLNVLFPPPRDCFGELDPLPVWDWGTTWVEEMEAQYRAGRTGGAAAKVMNSLSSVPDRW
GYHRQDARQADNKMPSHR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggcacatggcttctatgggcgtcatggctcctcacctgggcagaggcctca
cgccaatgccagtgccagtgtacctgttcgccagacgccacctcggaggtcaaggcagcc
aagcagggcaaggggcacatccatcaccatcatggggggcaccagaacctgcgtcacaga
cataggggcagcagaaggagaggttccaagtcccaggctgaagaaatccctcctcagatc
gtccaccaaccgtctgatgtggtagtgaaggtgggcagccccgccacgctctcctgcagg
gcctcgggcaacccggaacccaccatcgagtggctccgcaatgggcagcccctggacccg
gaccgcctggaggtccactcccggcccatagtgctgcccggggggagcatcttcttcctc
agcgtggtgcccgggaggaagagtcacgagggcgtgtatgcgtgtgtggcgagcaacagt
gccggcaacgccaccagtcgaaacgcctctctgcacgtcgcagtgttgcgagatgagttc
cgtgtgcagcccagtaatgtggaggttgccgtgggcgaggtggccatcatgaactgcagt
cctccgctggggcagcccgagcccaacgtctcctggaagaagaacggcatgctcatcaac
agcactgatgaccactacaccgtactcaatgggaaattaatcattgcccctacccagaag
agtgactccggagtctatatctgtgtggcatcaaacacggttggagtgagagagagccag
gcagccagactggcagtgttagtgaagccggtgctggtgctcaaaccccaggacgtgaca
gtgagggttggggaggcggcgcacttcttctgtgaggtagatggcgaccccatgcctgcg
gtggagtggagccgggagccgggccctctgccaaacggcagatatctggttaatccagac
cagagccttcagattcactatgtgactgagcaggacagtgggaaatacacctgcactgcc
gtcaatgagatgggggtgaccacagccagtgcggtgctttacatagaggacgcttcaaac
gctcgacagagggatcttcacaaggagctgtctgctatgcgggcggaactgcagagtgtt
gccatcatggctccctcctcaaacgtgtccttggtgcagtggaagctccagtctctacca
gcccagccacaatacctggatggatttgaggtgctctatcgctctctgctccctgccagc
tctgactgggctgcccaaaaggtgcccttgcccagcctccaagccccggtgggcccgctg
aagaggggctataagtacgagtttaaagtcaggccctatgggagtggcttatatggcaag
gagagcaacaccagacatctcagggtgccagagatggtccccagtgcccccccgcagggc
ctgagtgttaccatgccggtagaccggaacgacacggttctcctcagctggggtccgcct
cctcacgacgcccacaatgggatcatccaaggctatcaggtgtggtgtgtgcagtcagac
gaccagcagttttttaactggacagtggacagcgggactcacagtctggagataggcctg
ctgcacccgggcaggcagtactgggtcagagtggccgccctcaatggagccggggtcggc
gtgaagagtgacccgcatagacttctgatagagaacaaccggcgagtggctcctcctctc
ccggacgtgggcgctctccctcgtgttctggccgtggttcagcacccggtgttcattggc
agcgtcggcgtgctcctgtggtgcttccttatggtcgccgcggtgtgcctgtaccgccgc
cacgccaggaactcaggcctgggccacaaacaccacaagagctcaggtttgtaccgatta
gccagtgaagacctcatcatcaagcacaggatggcagccccggactccccgtggatatct
ggggcatggaggcccgctctgtgcagtaagccctaccaggacctgtgggcccagggccag
gagagccccaaccccagcctcagcaaaagcactctacccatcacagccaagaaggacccc
ggccatctagaaacggtcgtccctatagtacctgacagctgcggcgtatacggcacgttc
tacgtggatctcaccggcaagaacctcaagacctttaacagccccgcccgccgttgcaag
atgcctcactaccactccgaccagaacagcgagaccctcatcatccctcagcccatgtcc
agaaacaccacagcctgggacgggcaagcggtgcaatggaaacggcccctaccagcccag
cccaacatgggggttctgaaggaatcctgggagaaaaactccaagcgagagctccacgct
gtgaagagtgccccattagcacctatgtcccagcaggctcggccagcgggcagcgtagcc
agcgtgaccaatcagagactcagtcaccaaccgccaggtgggttcccagagtgcctgaag
ttggccggttctccccgcatggtccactactctgcctctctgcacctggtggatgtggca
cccccccagcccagcccccctcgctgcatggatgacacccacagcctgagctcagaggaa
ggcttcagcaggtcgaccaagctgacggaggacatgggctctctacagtccttctgcaca
gcgtctgcaatgcgaggggcagctaccgcctcctccatctgcccctcgtaccccaaccgc
acctacagccgtctctccacggcctccttcagcctgtctgcagggcccagcatggatgag
gacctggacctggatgccacgctgtccacacaggacagtatgcagtacccagagatgagg
cccagggctgccagggggcgcgtattatcagataacctcaccccacgacctttctccccg
accccgacgtttggctacatttgtgggccgtctgaggtggaggaggggggtgagcgtggg
ggtcctgacgggcgccgggcgcgcctgaggagcaccccctcgtcctgctgcagcgagtgg
gaagggtccctgtggaacgcctggggttccgtctccgagggcaacatgcccagcgcccgc
accagcatcatcagctcctctgactgctcgttcatgaacgacgccaactttgcccgagtc
ctcgcacttaccgccgagtccatgaacggagccactttctcagatttctctccttcagga
tctcccctgaacgtgctcttcccccctccgagggactgttttggggagttggacccctta
cctgtgtgggactggggcacaacctgggtcgaggagatggaggcgcagtaccgcgccggc
cggacagggggagcagcagctaaagttatgaacagcctatcctccgtcccagaccgctgg
ggttatcaccgtcaggacgccaggcaggctgacaacaaaatgccatcgcaccgatga
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