Clupea harengus (Atlantic herring): 105900380
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Entry
105900380 CDS
T09045
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
char04010
MAPK signaling pathway
char04141
Protein processing in endoplasmic reticulum
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105900380
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105900380
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105900380
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105900380
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105900380
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105900380
03009 Ribosome biogenesis [BR:
char03009
]
105900380
03110 Chaperones and folding catalysts [BR:
char03110
]
105900380
04131 Membrane trafficking [BR:
char04131
]
105900380
03051 Proteasome [BR:
char03051
]
105900380
03029 Mitochondrial biogenesis [BR:
char03029
]
105900380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105900380
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
105900380
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19 complex
105900380
Complex C
Prp19-CDC5 complex
105900380
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105900380
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP70 / DNAK
105900380
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
105900380
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
105900380
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105900380
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
105900380
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
105900380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
105900380
NCBI-ProteinID:
XP_012683125
Ensembl:
ENSCHAG00000015941
UniProt:
A0A6P3VWF0
LinkDB
All DBs
Position
8:17160304..17165317
Genome browser
AA seq
653 aa
AA seq
DB search
MSKGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA
MNPTNTVFDAKRLIGRKFEDGVVQSDMKHWPFTVIDDSTRPKVQVDYKGETKSFYPEEIS
SMVLVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKFKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRA
RFEELNADLFRGTLDPVEKSLRDAKMDKAAIHDIVLVGGSTRIPKIQKLLQDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDSQRDKVSSKN
SLESYAFNMKSTVEDEKLQGKISDEDKTKIMDKCNEVIGWLDKNQTAEKEEYEHHQKELE
KVCNPIITKLYQGAGGMPGGMPGGMPGGFPGAGAAPGGGSGGGSSGPTIEEVD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggaccagctataggcatcgaccttgggaccacatactcctgtgttggagtg
ttccagcatggcaaagttgaaatcattgccaacgaccagggcaacagaaccacccccagt
tatgttgccttcactgattcggagcgtctcattggagatgctgcgaagaaccaggttgcc
atgaaccccacaaacacagtctttgatgccaaaagactcattggacgcaaatttgaagat
ggggttgttcagtcagacatgaaacactggccattcaccgtcatcgatgattccacacgc
cccaaagtccaggttgactacaagggtgaaacaaagagcttctacccagaagagatctct
tccatggtcctagtaaaaatgaaggaaattgctgaagcctatcttggaaagactgttaac
aacgcagttgtcaccgtacctgcctacttcaatgactcccagcgccaagccaccaaggat
gccggcacaatctctggcttgaatgttctgcgtatcatcaatgagccaacggctgcagcc
attgcctatgggctggacaagaaggttggtgctgaaaggaatgtcctcatcttcgatctt
ggtggtggcacttttgacgtgtccatcctgaccattgaggacggaatctttgaagtgaag
tctactgctggagacactcacttgggcggcgaagactttgacaaccgcatggtcaaccac
ttcattgccgagttcaagcgcaagttcaagaaagacatcagcgacaacaaaagagccgtc
cgccgtctccgcaccgcctgtgagagagccaagcgcaccctgtcatcaagcactcaggcc
agtattgaaatcgactccctatatgagggagtcgacttctacacctccatcaccagggct
cgttttgaggagctcaacgctgacctcttccgtggcacattggacccagttgagaagtcc
ctccgtgacgccaaaatggacaaggccgcgatccacgacatcgtcctcgtcggtggttcc
acccgtatccccaagatccagaaacttttgcaagatttcttcaacggcaaggaactcaac
aagagcatcaaccccgacgaggctgttgcttacggtgctgctgtccaggctgccatcctc
tctggtgacaaatcagagaatgtccaggacctgctgcttctggacgtcactcctctgtct
ctgggtatcgagaccgctggtggcgtcatgactgttctcatcaagcgcaacaccaccatt
ccaaccaagcagacccagaccttcaccacctactccgataaccagcctggtgtgctcatt
caggtgtacgagggtgagcgtgccatgaccaaggacaataacctgctgggcaagttcgaa
ctgaccggtatccctccagctcctcgtggtgttcctcagattgaggtgacctttgacatt
gatgccaacggtatcctgaatgtctccgctgttgacaagagcactggcaaggagaacaag
attaccatcactaacgacaaaggtcgtctcagcaaggaggacattgagcgcatggtgcaa
gaggctgaaaaatacaaagccgaggacgacagccagcgtgataaggtgtcctctaagaac
tccctagagtcctacgccttcaacatgaagtccacagtggaggatgagaagctgcagggc
aagatcagtgatgaggacaagacgaagattatggacaagtgcaacgaggtcatcggctgg
cttgacaagaaccagactgctgagaaggaagagtacgaacatcaccagaaagagctggag
aaggtgtgcaaccccatcatcaccaaactgtaccagggcgccggtgggatgccaggagga
atgcccggtggcatgcccggcggcttccctggagcgggtgctgcaccaggcggcggaagt
ggtggtgggtcctccggaccaaccattgaggaggtcgactaa
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