Clupea harengus (Atlantic herring): 105900416
Help
Entry
105900416 CDS
T09045
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105900416 (bbs1)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
BBSome
105900416 (bbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
105900416
NCBI-ProteinID:
XP_012683179
Ensembl:
ENSCHAG00000026456
UniProt:
A0A6P3VWZ4
LinkDB
All DBs
Position
8:complement(15929450..15938164)
Genome browser
AA seq
587 aa
AA seq
DB search
MSAAQIEQDNSMASSKWLDAHYDPVANLYTFSSCMALADLHGDGESKLVVGDLGTGTNNM
KLRVYHGTGLLSENTLLDLPTGLVSFLMDQHEPRTPAIAVASGPFIYVYKNLRPYFKFTL
PSLEINALEQDVWIQARQDMIDTMSLKEMLEGIRDKAEIPLSVRSLRFLMLEPQDMEAFV
NLHKEQPLRRQTVITCIGTLNKNMADEDAVSCLVIGTENKDVFILDPEAFTILSKMSLPS
VPTMMDVTGQFDVEFRITVACRNGNIYILRRDSLQPKYCIELSAHPVGLVRMGKNVVVGC
AQETLQGYTQKGKKLWTVYLPAPVTTMGVMDLPTRGFQAVLVALASCEVHVYRDKNLVST
IKTPDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFEDRDSAPGPPLAQSIRLN
VPKKTKLYVDQTMRERENAVAMHRAFQMDLSRLRLAAARAYVKALESSLAPMSASITEPL
KMNAVVQGLGPSFKLTLNIQNTAASRPVMNLAVCFLFDEGLYSMRTAFFKIPLLVPGLNY
PIDTFVECLSDKGISDIIKVFVLREGKSAPLLTAHINMPVSEGLPLN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctcagattgagcaagataattcaatggccagttcgaagtggcttgatgca
cattatgatcctgtggcgaatctctacaccttttcgtcgtgcatggctctagccgacttg
catggagatggtgagagcaagcttgtggttggtgatcttggcacaggtacgaataacatg
aagctcagggtgtaccatggcactggattactgagtgagaacacgctgctcgacctgccc
accggcctggtgtctttcctcatggatcagcatgagccacgcacacctgccatagcagtg
gcatcaggcccttttatctacgtgtacaagaacctccgcccatacttcaagttcaccctg
ccctcgctggagatcaatgcactagaacaggatgtgtggattcaagcgagacaggacatg
attgacaccatgtccctgaaggaaatgttggagggaataagggacaaagctgaaatcccc
ctctcagtgaggtcattgaggttcctcatgctggaaccacaagacatggaagcttttgtg
aacttgcacaaagaacagcctttacgtagacagacggtcatcacatgcataggtacactg
aacaagaatatggcagatgaagatgcagtcagctgtcttgtgattggcacagagaataag
gatgtctttattctggacccagaggcctttaccatcctctccaagatgtccttgccgagt
gtgcctactatgatggacgtgacgggtcagtttgatgttgagtttcgcatcacggtggcg
tgtcgcaatggaaacatctatatcctgcgtagagattctctgcagcccaagtactgcatt
gagctgtcggctcaccccgtgggcttggtgaggatggggaagaatgtggttgtgggatgt
gctcaggagaccttgcaaggttacacacagaaggggaagaagttgtggaccgtctacctg
cccgcccccgtgaccactatgggggtgatggacctccccacacggggtttccaggcggtt
ctggtggccctggccagctgtgaggtgcatgtgtatcgggacaaaaatctcgtgagcacg
atcaagactccggatgtggttaccagcatttgctttggtcgatacgggcgagaagatggc
accttaattatgactaccaaaggtggaggtttgatcgtgaagatcctgaagaggacggct
gtctttgaggacagggactccgcccctgggcctcctctggctcaaagcatccgcctcaac
gtccccaagaagaccaaactgtacgtggaccaaaccatgagggagagggagaatgctgtg
gctatgcacagggccttccagatggacctgagccggctccgtctggctgcagcacgggcc
tatgtgaaggctctagagtccagcctcgcccccatgtcagccagcatcaccgagcctctc
aagatgaacgcagtggttcagggtctgggcccgtccttcaagctcactctgaacatccag
aacacagctgccagtcgtccggtcatgaacctagccgtctgtttcctgtttgacgaaggc
ctctacagcatgagaacagccttcttcaagatcccactgctggtccccggcctcaactat
ccgatcgacacgtttgtggagtgcctgagcgacaaaggcatttccgacatcatcaaagtg
tttgtcttaagagaggggaagagcgcccccctactgacggcccacattaacatgcctgtc
agcgagggcctgcctctcaactga
DBGET
integrated database retrieval system
