Clupea harengus (Atlantic herring): 105900470
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Entry
105900470 CDS
T09045
Symbol
slc22a13a
Name
(RefSeq) solute carrier family 22 member 13
KO
K08209
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105900470 (slc22a13a)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
105900470 (slc22a13a)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
105900470 (slc22a13a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
105900470
NCBI-ProteinID:
XP_031418681
Ensembl:
ENSCHAG00000025286
UniProt:
A0A6P8F3C4
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All DBs
Position
25:complement(8290117..8295474)
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AA seq
542 aa
AA seq
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MADFGEILEAVGEFGLFQKLLLIGLSFPNTLLPFHLTSLIFNQGNGGQRCDTDWILAAGP
NLTLEEQLNLTIPRHQDGSFSTCHMFVPVDWDLSAIRGDGLNDTTTCINGYVHDLSVFKT
SIVSDFDLVCDKANLVGLAQTVFMAGILVGSLLFGPFAESIGRQRATQIPVVIMAIFTLV
TGLSPNFYFYVVSQFIVGVSYGGFRVNCIVLATEWIGKNRRAYASCLTQMLGGLGQCIQA
GIVYFIRDWKTAQFIMGGPIVFVSLYIWFIPESARWLLDRGKTEQARKLILKAAAINKRT
VPDRLLEKLKEEKKVERGGIRALLASPVLRKYFFSIAFAWSALNLAYYCLSLNVGKYGLN
IFLTAFIFGATEVPAHILCIWLLEAAGRKASLISTLLVGGFICLLTLAVPQGGAIAVTAL
ATAGRFFMNWAGTVCNVYVQELFPTSIRQTATGLGSTATRVAGMLAPVVNLLEVYHWTLP
RLVYSSLALMGGALGFLLPETRRTELPDSTEEAEGKRNTKVMKTIEAPSMLDDSKTCIAT
KL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcggggagattctagaggctgttggagagtttggtctcttccaaaaactc
ctcctaattggactgagcttcccaaacaccctgcttccatttcacctcaccagtctgatc
tttaatcaaggcaatggaggacagcgctgtgacactgactggattttagcagcgggcccc
aacttgactctggaggagcagctgaatctgacgataccccggcaccaggatggctccttc
agcacctgtcacatgtttgtcccggtggactgggacttgtcggccattagaggggacggc
cttaatgataccaccacctgcattaatggttatgtgcatgacctctctgtcttcaagacc
tccatagtctctgattttgatctagtctgtgataaggcaaatttagttggcctggcacag
acagtgttcatggctggtattctggttgggtccctcttgtttggacccttcgctgaatcg
attggtcgacagcgggccactcagatacccgtcgttatcatggccattttcactttggtg
accggcctatctcccaatttctatttttacgtggtatctcagttcattgtaggagtttcc
tatggaggattccgtgttaactgcattgtcttagccaccgaatggataggaaagaacagg
cgtgcctatgcctcctgtttaacacaaatgctggggggtctcggccagtgcattcaagct
ggtattgtgtatttcattcgggactggaaaactgcccagttcatcatgggaggtcctatt
gtttttgtgtctctttatatctggttcatccctgaatctgccaggtggttgttggatcga
gggaaaactgagcaagctagaaagctgattctcaaggcagctgccataaacaaacgcaca
gttcctgacagactattagagaagctaaaagaggagaagaaagtggagagaggtggcata
agagcgctcttagcctcgccagtgctgaggaagtacttctttagcattgcgtttgcatgg
tctgcattaaacctggcatactactgcctgtcgctgaacgtcgggaagtacggccttaac
atatttctcactgcgttcatttttggggcaacggaggtgccggcccacatcctctgtatt
tggctgctggaggcggcggggaggaaagcctcactcatatccaccctgctggtggggggc
ttcatctgcctgctcacgctcgctgttccacaaggtggggctattgctgttactgccctt
gctacagcagggaggtttttcatgaattgggcggggaccgtgtgcaatgtttatgtccaa
gagctcttccccacctccatcagacaaacggccacaggcctgggttccacagccacacgt
gtggctggcatgctggctcctgtagtgaacctgctggaggtctaccactggaccctcccc
aggctggtgtacagcagcctcgctctgatgggaggggccctgggcttcctgctgcccgaa
accagacgcacggaactgcccgactccacagaggaggcagaggggaagagaaacacaaaa
gttatgaagacgatagaagctccaagcatgctggatgattccaaaacctgcatagcaaca
aaactttga
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