KEGG   Clupea harengus (Atlantic herring): 105900477
Entry
105900477         CDS       T09045                                 
Symbol
wdr77
Name
(RefSeq) methylosome protein 50
  KO
K13221  methylosome protein 50
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105900477 (wdr77)
Spliceosome [BR:char03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    105900477 (wdr77)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_Vps41 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 105900477
NCBI-ProteinID: XP_012683252
Ensembl: ENSCHAG00000006920
UniProt: A0A6P3VY18
LinkDB
Position
5:2707807..2713490
AA seq 325 aa
MIKDNWNIPPNAPACMEKHLVSAHYRADGALLLAASSLTGRSWMGSIWVYTDPKQAPNEG
FCKAGVQTDAGVTQAQWVSEKGILVASDSGAVELWELAEDERLLVNRFSKQEHDHVVTSI
STTAGGAHAISGGMDCSVRIWDLSQETVINTYFAHTMPVSCVAGCPSDEALLLSCGQDGR
LLLWDRRKPKPASRLDIVAPSCSPTTAAWHPLQSSTIAYGDELGRVTVRDLHTSEQTQTL
NTHKRRVTGLAFSAHSAPLLASTSDDCMVAVVNAELREIFRDKKHQDFVRGLCWATGGLD
TLTTVGWDHQVLHHSISQSQPTPQP
NT seq 978 nt   +upstreamnt  +downstreamnt
atgattaaggataactggaatattccccccaacgcacccgcgtgcatggagaaacattta
gtgtctgctcactacagagctgatggagctctgcttttagcagcttccagtctaactggt
aggtcctggatgggctccatctgggtgtacaccgacccaaagcaggcgcccaacgagggc
ttctgcaaggctggggttcagactgatgcgggggtcacacaggctcagtgggtgtccgag
aaaggcatcctggttgcttcggattcaggtgctgtggaattgtgggagctggcggaggac
gagcggctgctggtgaaccgtttcagcaagcaggagcatgatcacgtggtcaccagcatc
agcactacagcaggaggtgctcatgccatcagcggtggcatggactgcagtgtcagaatt
tgggaccttagccaagagacagtcatcaacacatattttgcccacaccatgcctgtcagc
tgtgtggccggctgcccttcagacgaagccctccttctctcctgtggtcaggatggtcgg
ctgcttctatgggaccgcagaaaacccaaaccggcatctcggctagacatagtggctccc
agctgttcgcctaccacagcagcatggcacccactccaaagcagcacgattgcctatggt
gatgagctaggaagggtcacagtgagggacctgcatacatctgagcaaacccagacgctg
aacacccacaaacgcagggtgaccggcttggctttctccgcccacagtgccccactgcta
gcctccacaagtgatgactgcatggttgccgtggtgaatgcagagctcagagaaattttc
agagacaagaagcaccaggactttgttcgcggattatgttgggccactggcgggttggac
accctcaccacagtgggctgggaccaccaggttctccaccacagtatcagccagtctcaa
ccaaccccccaaccctag

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