Clupea harengus (Atlantic herring): 105900482
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Entry
105900482 CDS
T09045
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105900482 (cdh12a)
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105900482 (cdh12a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Cadherin_CELSR2_9th
Stevor
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
105900482
NCBI-ProteinID:
XP_012683254
Ensembl:
ENSCHAG00000027332
UniProt:
A0A6P3VWJ8
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All DBs
Position
25:complement(9132213..9167296)
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AA seq
803 aa
AA seq
DB search
MLTGNCWLLFLWCMLDKGFVAPLRSPSHGRMGKEHQRSATALRRQGISGVQRVKRGWVWN
QFFVLEEYMGSEPQYVGKLHTDMDRGESMVKYTLSGEGAGSIFTIEPTTGDIHALRSLDR
EEKPYYTLRAQAVDMRTGRPLEPESEFVIKVQDINDNEPRFRGGPYAASVPEMSPVGTYV
TQVTASDADDPTYGNSARIVYSVIHGQPYFSVDSKTGIIRTALPNMDREVKEVYQVLIQA
KDMGGQLGGLAGTTTINITLGDVNDNPPRFTKSIFHLRVPESSHVGSAVGKIVAHDLDHG
KNAQVEYSIVPGDGGTMFDIVTNELNQEGIVILKKRLDYETRKAYTFKVEASNVHLDPRF
LFQGPFKDTATVKVNVLDVDEPPVFSKPHYSMEAYEDTPVGIIVGAVRAQDMDVGNSPIR
YSLDWNRDLEHAFDIDPVEGLITVSEFLDRETVAQHNITVVATKVNNPLLFSMAGVTITV
LDVNEFAPELVIPPETIVCENAKVGQVIQTISAQDRDLSAMGQRFYFKALKDVRNRNFTI
RDFGNNTAGIVARRSGFRRQQQRWYAVAVVVEDGGYPVLSSTATLSVQVCSCRAGGALLS
CSAEAVFLPVGLSTGALVAILLCVVILLVIVVLYVGLRRHKDKEALMSSKEDIRDNVIHY
DDEGGGEEDTHAFDMGTLRNPKAVKETALRRDVRPDGRSLSDLARASTAAAEDSEDIRTY
IHQRLMENHASGSTPPYDSLATYAYEGEGSVAESLSSIESWGGDPEEEFKCISDWGPRFK
MLAGLFEEQDAQATEVSDNKDSH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctcacagggaactgctggttgctgttcctctggtgtatgttggacaaaggcttcgtc
gctccccttcgctctccgtcccacggcaggatggggaaggagcaccagcggagcgcgacg
gccctgaggaggcaggggatctccggagttcaaagggttaagagaggatgggtgtggaac
cagttctttgttctggaagaatatatgggttcagaaccacagtatgttgggaagctccac
actgacatggacaggggagagagcatggtgaagtacacgctgtccggagagggagcgggc
tccattttcaccatagagcccacgaccggagacatccatgccttaaggagcctggacagg
gaggagaagccttattataccctacgagcccaagcggtggacatgcgcaccggccggccg
ctggagcccgagtccgagttcgtcatcaaggtgcaggacatcaacgacaacgagcccagg
ttccggggcggcccgtacgcggcctctgtgccggagatgtcacccgtaggcacttatgtg
acccaagtgacagcgagcgatgctgacgaccccacctatggaaacagtgccaggatcgtg
tacagcgtcatccatgggcagccatacttctcagtggattcaaaaacagggattatcagg
acagctttgccaaacatggaccgggaggtaaaagaagtttaccaggtcctgattcaagcc
aaggacatggggggccagctgggggggctggcagggaccaccaccatcaacatcaccctc
ggcgacgtcaacgacaacccccccagattcaccaaaagtatctttcatctccgcgtccca
gagtcctctcatgttgggtcagccgtgggcaagatcgttgctcatgacctagaccacggg
aagaatgcccaagtggagtacagcatcgttcctggggacggaggcaccatgtttgacatt
gtcaccaatgaactcaaccaggaaggcatagtgatcctgaaaaagcgactggactatgag
accagaaaggcatacactttcaaagtggaagcttctaatgtgcacttggaccctcggttc
ctgttccaggggccgtttaaggacacggcgacggtgaaggtgaacgttctggacgtggat
gagccccctgtgttcagcaagccccactacagcatggaggcctacgaggacacacctgtg
ggcatcattgtaggcgcagtgagagcacaggatatggatgtaggcaacagtccaattagg
tattctctggactggaacagggatttagagcatgcatttgacattgacccagtggaggga
cttatcacagtcagtgagttcctggaccgggagactgtagcacaacacaacatcacagtt
gttgctactaaagttaacaacccactactgtttagtatggctggtgtcacaattaccgtg
ctggatgtcaacgagtttgcccctgagcttgtcattccacctgagacaattgtttgtgaa
aatgccaaagttggccaggtgatccagacgatcagtgcacaggacagagatctctctgca
atgggtcagaggttctacttcaaggcactcaaagacgtacggaataggaacttcaccata
cgggactttggaaacaacacggcgggcatcgtggcgcggcgctctggcttcaggcggcag
cagcagcgctggtacgccgtggccgtggtggtggaggacggcggctacccggtgctgagc
agcacggccacgctgtcggtgcaggtgtgctcgtgccgggccggcggcgcgctgctgtcg
tgcagcgccgaggccgtcttcctgcccgtgggcttgagcaccggcgcgctggtggccatc
ctgctttgcgtcgtcatactgctggtgattgtggtgctctatgtgggcctgagacggcat
aaggacaaggaggccctcatgtcctccaaggaagacatcagggacaacgtgatccactac
gatgacgagggagggggcgaagaggacacgcacgccttcgacatgggaactctccgcaac
cccaaggctgtgaaggagaccgcactccgacgggacgtcaggccagacggacgctctctg
tcggacctggcccgcgcctccaccgcagccgccgaggacagcgaggacatccgcacgtac
atccaccagcggctcatggagaaccacgccagcggctccacgccgccgtatgactcactg
gccacgtacgcgtacgagggggagggctcggtggccgagtcccttagttccattgagtca
tggggcggggaccccgaggaggagttcaagtgcatcagtgactggggcccacgcttcaag
atgctggcaggcctctttgaagagcaggatgcacaggccacagaggtcagtgacaacaaa
gactctcactga
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