KEGG   Clupea harengus (Atlantic herring): 105900482
Entry
105900482         CDS       T09045                                 
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
  KO
K06804  cadherin 12, type 2, N-cadherin 2
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:char04515]
    105900482 (cdh12a)
Cell adhesion molecules [BR:char04515]
 Cadherins
  Major cadherins
   105900482 (cdh12a)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N Cadherin_4 Cadherin_CELSR2_9th Stevor ASFV_J13L
Other DBs
NCBI-GeneID: 105900482
NCBI-ProteinID: XP_012683254
Ensembl: ENSCHAG00000027332
UniProt: A0A6P3VWJ8
LinkDB
Position
25:complement(9132213..9167296)
AA seq 803 aa
MLTGNCWLLFLWCMLDKGFVAPLRSPSHGRMGKEHQRSATALRRQGISGVQRVKRGWVWN
QFFVLEEYMGSEPQYVGKLHTDMDRGESMVKYTLSGEGAGSIFTIEPTTGDIHALRSLDR
EEKPYYTLRAQAVDMRTGRPLEPESEFVIKVQDINDNEPRFRGGPYAASVPEMSPVGTYV
TQVTASDADDPTYGNSARIVYSVIHGQPYFSVDSKTGIIRTALPNMDREVKEVYQVLIQA
KDMGGQLGGLAGTTTINITLGDVNDNPPRFTKSIFHLRVPESSHVGSAVGKIVAHDLDHG
KNAQVEYSIVPGDGGTMFDIVTNELNQEGIVILKKRLDYETRKAYTFKVEASNVHLDPRF
LFQGPFKDTATVKVNVLDVDEPPVFSKPHYSMEAYEDTPVGIIVGAVRAQDMDVGNSPIR
YSLDWNRDLEHAFDIDPVEGLITVSEFLDRETVAQHNITVVATKVNNPLLFSMAGVTITV
LDVNEFAPELVIPPETIVCENAKVGQVIQTISAQDRDLSAMGQRFYFKALKDVRNRNFTI
RDFGNNTAGIVARRSGFRRQQQRWYAVAVVVEDGGYPVLSSTATLSVQVCSCRAGGALLS
CSAEAVFLPVGLSTGALVAILLCVVILLVIVVLYVGLRRHKDKEALMSSKEDIRDNVIHY
DDEGGGEEDTHAFDMGTLRNPKAVKETALRRDVRPDGRSLSDLARASTAAAEDSEDIRTY
IHQRLMENHASGSTPPYDSLATYAYEGEGSVAESLSSIESWGGDPEEEFKCISDWGPRFK
MLAGLFEEQDAQATEVSDNKDSH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgctcacagggaactgctggttgctgttcctctggtgtatgttggacaaaggcttcgtc
gctccccttcgctctccgtcccacggcaggatggggaaggagcaccagcggagcgcgacg
gccctgaggaggcaggggatctccggagttcaaagggttaagagaggatgggtgtggaac
cagttctttgttctggaagaatatatgggttcagaaccacagtatgttgggaagctccac
actgacatggacaggggagagagcatggtgaagtacacgctgtccggagagggagcgggc
tccattttcaccatagagcccacgaccggagacatccatgccttaaggagcctggacagg
gaggagaagccttattataccctacgagcccaagcggtggacatgcgcaccggccggccg
ctggagcccgagtccgagttcgtcatcaaggtgcaggacatcaacgacaacgagcccagg
ttccggggcggcccgtacgcggcctctgtgccggagatgtcacccgtaggcacttatgtg
acccaagtgacagcgagcgatgctgacgaccccacctatggaaacagtgccaggatcgtg
tacagcgtcatccatgggcagccatacttctcagtggattcaaaaacagggattatcagg
acagctttgccaaacatggaccgggaggtaaaagaagtttaccaggtcctgattcaagcc
aaggacatggggggccagctgggggggctggcagggaccaccaccatcaacatcaccctc
ggcgacgtcaacgacaacccccccagattcaccaaaagtatctttcatctccgcgtccca
gagtcctctcatgttgggtcagccgtgggcaagatcgttgctcatgacctagaccacggg
aagaatgcccaagtggagtacagcatcgttcctggggacggaggcaccatgtttgacatt
gtcaccaatgaactcaaccaggaaggcatagtgatcctgaaaaagcgactggactatgag
accagaaaggcatacactttcaaagtggaagcttctaatgtgcacttggaccctcggttc
ctgttccaggggccgtttaaggacacggcgacggtgaaggtgaacgttctggacgtggat
gagccccctgtgttcagcaagccccactacagcatggaggcctacgaggacacacctgtg
ggcatcattgtaggcgcagtgagagcacaggatatggatgtaggcaacagtccaattagg
tattctctggactggaacagggatttagagcatgcatttgacattgacccagtggaggga
cttatcacagtcagtgagttcctggaccgggagactgtagcacaacacaacatcacagtt
gttgctactaaagttaacaacccactactgtttagtatggctggtgtcacaattaccgtg
ctggatgtcaacgagtttgcccctgagcttgtcattccacctgagacaattgtttgtgaa
aatgccaaagttggccaggtgatccagacgatcagtgcacaggacagagatctctctgca
atgggtcagaggttctacttcaaggcactcaaagacgtacggaataggaacttcaccata
cgggactttggaaacaacacggcgggcatcgtggcgcggcgctctggcttcaggcggcag
cagcagcgctggtacgccgtggccgtggtggtggaggacggcggctacccggtgctgagc
agcacggccacgctgtcggtgcaggtgtgctcgtgccgggccggcggcgcgctgctgtcg
tgcagcgccgaggccgtcttcctgcccgtgggcttgagcaccggcgcgctggtggccatc
ctgctttgcgtcgtcatactgctggtgattgtggtgctctatgtgggcctgagacggcat
aaggacaaggaggccctcatgtcctccaaggaagacatcagggacaacgtgatccactac
gatgacgagggagggggcgaagaggacacgcacgccttcgacatgggaactctccgcaac
cccaaggctgtgaaggagaccgcactccgacgggacgtcaggccagacggacgctctctg
tcggacctggcccgcgcctccaccgcagccgccgaggacagcgaggacatccgcacgtac
atccaccagcggctcatggagaaccacgccagcggctccacgccgccgtatgactcactg
gccacgtacgcgtacgagggggagggctcggtggccgagtcccttagttccattgagtca
tggggcggggaccccgaggaggagttcaagtgcatcagtgactggggcccacgcttcaag
atgctggcaggcctctttgaagagcaggatgcacaggccacagaggtcagtgacaacaaa
gactctcactga

DBGET integrated database retrieval system