Clupea harengus (Atlantic herring): 105900486
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Entry
105900486 CDS
T09045
Symbol
rnf152
Name
(RefSeq) E3 ubiquitin-protein ligase rnf152
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105900486 (rnf152)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105900486 (rnf152)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105900486 (rnf152)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105900486 (rnf152)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-C3HC4
Zn_ribbon_TEX13
SMIM5_18_22
zf-C3HC4_4
zf-C3HC4_2
SNARE
Motif
Other DBs
NCBI-GeneID:
105900486
NCBI-ProteinID:
XP_031419007
UniProt:
A0A6P8F783
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All DBs
Position
25:complement(9383204..9387916)
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AA seq
197 aa
AA seq
DB search
MSSLGQDSLLECQICFNFYGSRRRPKLLGCGHTCCSACLGRMCGSQCEVACPWCRALTSF
PEGLSVSQLPDDPQTLLFLARRMPVFMRLPGDGCYLLPLSADAEGPLLPGELAPCLVRTS
QLKDVTVVTVADNRMLELERGRGGRGGDRREDHVVKQSRWTTVCTVVLVVIILLFLLAII
LQNIACVSKPFTIIACR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcctgggtcaggactcgctgctggagtgccagatctgctttaacttctacggt
agccggcggcggcccaagctgctgggctgtggtcacacctgctgctcggcgtgcctgggg
cgcatgtgcgggagccagtgcgaggtggcctgcccgtggtgtcgcgccctcaccagcttc
cccgagggcctctctgtctcccagctccccgatgatccgcagaccctcctcttcctcgcc
cggcgcatgccagtgttcatgcgcttgcccggcgacggctgctacctgctgcccttgtca
gcggatgcagagggtcctctgttgccgggggagcttgcaccctgcttggtcagaaccagt
cagctgaaggatgttaccgtggtgacagttgccgacaaccggatgctggaattggagagg
ggaagaggaggacggggaggggatcggagagaggaccatgtagtcaaacagtcacgctgg
acgacggtctgcacagtggtcctagttgtcatcatcttgctctttctgctagctatcatt
ttgcaaaatattgcttgtgtctccaaacccttcacaataatagcttgcagataa
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integrated database retrieval system
