Clupea harengus (Atlantic herring): 105900511
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Entry
105900511 CDS
T09045
Name
(RefSeq) desmoglein-2-like isoform X1
KO
K07597
desmoglein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105900511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105900511
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105900511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
PAF
Motif
Other DBs
NCBI-GeneID:
105900511
NCBI-ProteinID:
XP_031418739
Ensembl:
ENSCHAG00000001004
UniProt:
A0A6P8F1X9
LinkDB
All DBs
Position
25:11630617..11639559
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AA seq
1119 aa
AA seq
DB search
MAHAASVIKIFVPILILIIQVQGYGRGLQKLHRQKREWIISPRKLMENEDYTKWEYIAKI
RSDEEINVRYSLVGKGASEEPFNLFTVNEKTGYVRIHGILDREETPSYHLKGVAMFTDGN
RAEKDIDLVIVVEDQNDCPPVFSFEITGEVSEASATGTYVMKVNATDADKPGTLHSQIAY
SIVAGGGSMFYINQKTGEIHVKQQTLDRETLDTYTLTIKGTDMNGSPGGLSGTGKFVVKI
LDVNDNIPTLENTYYEAKVMENTFNVTVLRIKALDADLIHTDNWLALFTIVSGNEAGYFS
ITTDSKTNEGILVLNKALDYEQLKELNLLVAVSNKAEYHSSIITSTTKTKTYPIKIHVQN
EPEGPRFQPLVKVVRVSEDHTTINLKEVITTYAAIDSDTLLIATNVIYAKGEDKHNWITI
DQHTAEIRLNKLPDRESLHLVNGTYYAKIICITTDFPRKTATGTIAIQVEDFNDNCPTLT
STNQTVCFQENVVYVTAVDGDAYPNGAPFEFKVVSNTKEEWSVERLNDSTAILRPKESLW
PGRYKVFMVIKDQQGKACDNDQVLHLEVCSCTKDNKCLPRLDRRPSATLGPAGILLMLLG
LLLLFLLPLLLLFCLCGGAGDVGGFKPMPWEAKQHLVDYNCEGQGEDKDVPMVFFPTEVD
GGLVTKGKVDLIGAAGSHLSQSNINNGHYHWFNQVNTDHGTWYGQHGQGFGGSSVQRGAF
EGIALSEEFLRNYYSNKASCVEGLESAKENLLIYEYEGQESPVGSVGCCSLLEEDHDLEF
LNDLGPKFKTLAGICGGAAFEFESSKVMVPAPQPSASHVTNVCSSGEISQSISAAKADAK
SLATSSTMVQESVSSTTCHAATNMHLQENRVVPTQTLLIQQPTLYYAAAPPMYVVDPHPH
PTLLVGPTVNVGENLVMVERQATTGGSIQLQGIRQGVVGLDNLQGAHSLVLVEGRASAAG
DPQVMVERHATTGGSIQLQGIRQGAVGLENLQGAHSLVLVEGRASAAGDPHQIIGTLGRR
QVVEMQQGMGSSSVNQMGYGVTSGNISLSETAVTAGSGRLQHEGSGGFIQVVPSQSHMSQ
SVEVRGQSASLNVPLETNKVFVQERVSFTERNMQSSSIA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgcagcatcagttatcaaaatatttgtgccgattctaatactgattatacaa
gtccaggggtatggcagaggactacagaaacttcacaggcagaagagagaatggataatt
tctcccaggaaactaatggagaatgaagactatactaagtgggaatacatagcaaaaata
cgcagtgatgaagagatcaatgtacggtactctctcgtaggcaaaggagcatctgaagag
ccgttcaaccttttcacagtgaatgaaaagactggctatgtcaggatccatggcattctt
gacagggaggagacaccttcttaccacttgaagggagtggccatgttcacagatgggaac
cgtgcagagaaagacattgacctggtgatagtagttgaagaccaaaatgattgtccacct
gtgttctctttcgaaattactggggaagtcagtgaagcaagtgcaacaggtacctatgtg
atgaaagtcaacgccacagatgcagacaagcccgggacgcttcactcacagatagcctac
agtattgttgctgggggcggtagcatgttctacatcaaccagaaaacaggagagatccat
gtcaaacagcaaactctagacagagagacccttgacacttacactctaacaatcaaagga
actgatatgaacggaagtcctggagggctctcgggaactggaaaatttgttgtcaagatt
ctggatgtaaatgacaacattccgaccctggaaaatacctattacgaggccaaagtaatg
gagaacacattcaacgtgacggtgttgaggatcaaagcactggacgctgatttaatccac
actgataactggctggctctcttcaccattgtgtctggaaatgaagcaggatactttagc
atcaccacagacagcaagacaaacgagggcattctggtgctgaacaaggccttagactac
gagcaactgaaagagctcaacctgctggtggctgtttccaacaaagcagagtaccactcc
tccatcatcacctccaccaccaagaccaagacttaccccatcaagattcatgtccaaaat
gagccagagggccctcgcttccagcctttagtcaaagtggtgcgtgtctcagaggatcac
accaccattaacctaaaagaggtcatcactacctacgcggccattgatagtgacacgctg
ctgattgccaccaatgtcatatatgccaaaggagaagataagcataactggataacgata
gatcaacacactgctgaaatcagactgaataaactcccagacagagaatccctccacctg
gttaatgggacctactatgccaaaatcatttgtatcacaacagattttccaagaaaaaca
gccacaggaaccatcgctattcaagttgaggacttcaatgacaattgcccgacccttacc
agcacgaaccagactgtgtgctttcaggagaatgtggtgtatgtcacagccgtggatggg
gatgcctatcccaatggggcaccatttgaatttaaagttgtgtccaacacaaaagaagag
tggtctgtagaacgcctgaatgacagcacggccatcttacgacccaaagagagtctgtgg
ccaggcaggtacaaggtctttatggtgatcaaggaccagcagggaaaagcctgtgataat
gaccaggtgttacatttggaggtgtgcagttgtaccaaggacaacaagtgcctcccacgg
ctggataggagacctagcgccaccctgggaccagcaggcatcctcctgatgctcctggga
ctcctactgcttttcttgctgcctctcctgctgctgttctgcctgtgtggtggtgctgga
gacgtgggcggttttaagcccatgccctgggaagccaaacagcacttggtcgattataac
tgcgagggccaaggggaagataaggacgtgcccatggtgttctttccaacagaagtggac
ggtggcttagtaacgaaagggaaggtggacctcataggcgctgctggttcacatttgtct
caaagtaacattaataatggacactaccactggtttaaccaagtaaacacggatcatgga
acatggtatgggcaacatggccaaggatttgggggatcatcagtccagaggggtgcattt
gaaggcattgctctgtctgaggagttccttagaaactattattcaaataaagccagctgc
gtggaggggcttgaatctgcaaaagaaaacctgctcatctatgagtatgagggccaggag
tctccggtgggctctgtgggctgctgcagtctcctcgaggaagaccacgacctggagttc
ctcaatgacctggggcctaaatttaagactctggctggcatctgtggtggtgcggccttt
gaatttgaatctagtaaggtgatggtcccagctcctcagccttctgcgtcacatgtgaca
aacgtttgttccagtggggagatctcacagagcatcagcgcagccaaagccgatgccaaa
agcttggccacttcctccaccatggtccaggaaagcgtttcctctacaacctgccatgca
gccaccaacatgcatcttcaagagaatagagtggtcccaacccagacactacttatccag
cagccaactctctactatgctgctgccccacctatgtatgtagtggacccacatccccat
cccaccctgcttgtaggccctacagtcaatgtgggtgaaaacctggtcatggtagagaga
caagccactacaggtggctctatccagctacaggggataaggcagggtgtcgttgggctg
gataacctccagggagcccacagcttggttctggtggaagggagggcctctgctgctggt
gaccctcaggtcatggtagagagacatgccactacgggtggctctatccagctacagggg
ataaggcagggtgccgttgggctggagaacctccagggagcccacagcttggttctggtg
gaagggagggcctctgctgctggtgaccctcaccagattattggcacgttaggtagaagg
caagtggttgagatgcaacaaggaatgggcagcagttctgtgaaccaaatgggctatggt
gtgacctctggtaatatctcactgtcagagacagcagtaactgctggaagtggaaggcta
cagcatgaaggcagtggaggtttcattcaggttgtcccatcccaaagccatatgagtcag
agtgtagaagtgagaggccaaagtgcgtctttgaatgttcctctcgagacaaacaaagtg
tttgttcaggagagggtgtcgttcactgagagaaatatgcaatccagtagtatagcataa
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