Clupea harengus (Atlantic herring): 105900555
Help
Entry
105900555 CDS
T09045
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105900555 (kcnn1a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
105900555 (kcnn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
IRK
Ion_trans
Motif
Other DBs
NCBI-GeneID:
105900555
NCBI-ProteinID:
XP_031418918
Ensembl:
ENSCHAG00000017288
UniProt:
A0A6P8ERX7
LinkDB
All DBs
Position
25:7912828..7936051
Genome browser
AA seq
998 aa
AA seq
DB search
MRLVLVKSTNETSQFDSSGVDRYERVSEVYKAKERPQQDAAIEGMRHRYAGAVHQHQFPD
AEQRNAQSNSATSEKGNSSPVAPLFSLPPPPPSQRERSTSSYHQNHDDLPCQNQSATQAV
HVRQLQFGKSPSLTSQEIVQRPARQGGPFETQLTRPHESSGASVASTQSEVFLLESRHCS
FSTEANHTHQREAHICPQPSPSHLPPPLFLQNPSPRENFQYSANYQHGAIAQRKAGVFEH
RDQKQLLQQQQCSAIGLQQKNTFSQSVTQNSCHGQINVCEPTVTNQRFFESPALDLQQQQ
PQLRAQRQILVGSSLPINYCTKGAGELCRNNQAPPLQQHWQEDVRGQHLHSLPQIPQSSG
HESGELNDTFSIRQGQQYQAPEHIRRLVRNSSDTSSSNSSPPYGSSNQLWPERHYQERRS
RTDKQKVNAETTKLSHAGSKLSVSASSSHSLPQIAMNSCKYNGGVVRPLGSVASSRRNLA
EHDSETQPLQTLHSSGLEVVVSKGNSDENSKASNESLVGEGSGNGKKNKDIGYKLGHRRA
LFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLII
MYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYV
PSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLM
TICPGTVLLVFSISSWIIAAWTVRVCERDTMYHDKQEVTSNFLGAMWLISITFLSIGYGD
MVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTA
ANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLV
DLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGTLQALPCLISQAITQQQQDLL
DSFMHRYRPASLGSDRSWTPSRRRRSPSTAPHTSSDSG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtcttggtgaaatctaccaatgaaacgagccagttcgattcatctggggtt
gatcgctatgaacgggtgtcggaggtttacaaggcaaaggagcgaccacaacaagacgcg
gctattgaggggatgcggcatcgatacgcgggagctgttcaccagcaccaattccccgac
gcagaacaacgcaacgctcagagcaattcagcgacttctgaaaaaggaaattcgagtcca
gtcgcaccccttttcagtttgccaccccctcctccatcgcagagagaacgatcaacctcc
tcctatcatcagaaccacgatgacctgccttgccagaatcagtcagctacgcaggctgtc
cacgtccgtcagttgcaattcggcaagtccccgtctttgacaagtcaagagattgttcag
cgacctgcacgccagggtggtccatttgaaacccagcttacgcggccgcatgagtcttct
ggagcatcggtagcctcaacgcaatcggaggtgttccttctcgagagccgccactgcagt
ttttctacggaggcgaaccatactcatcagcgcgaagcccacatttgcccgcagccctcc
ccttctcacctgccgccgcctctgtttttgcaaaatcctagtccgagagagaattttcag
tatagcgctaattaccaacacggagccattgcgcaacggaaagcgggggttttcgagcac
cgagaccaaaagcaattgttgcagcaacagcagtgcagcgctatagggcttcaacaaaag
aacacattctcacaatcagtcacacaaaactcatgtcatggacaaattaatgtatgtgag
ccaacggtgacgaatcagcgattttttgaatctccggctctggacttgcagcagcaacag
cctcaattgcgagctcagcgtcaaatactagtagggagcagcctccctatcaactattgc
accaaaggcgcgggagagctgtgcagaaataaccaagcaccgccactgcaacaacattgg
caagaggacgtacgcggacagcatctccattcgctgccgcaaattccgcaatccagtggc
catgagagtggcgaactaaacgatacattcagcatacggcaggggcaacagtaccaggca
cctgaacatatacgtcgactggtgagaaactcatctgacaccagtagcagcaacagcagc
ccaccgtacggatccagcaaccaactgtggccagagcgccattatcaagagcgaaggagt
cgaaccgataaacaaaaggtcaatgctgagacgacgaagctgagccatgccggatccaag
ctctcagtctccgcgagcagcagccactcgttgcctcagatagccatgaacagctgcaag
tacaatgggggagtggtaagaccactgggcagcgtggcgtcgtcacggcgcaacctggca
gagcacgactcggagacccaaccgctgcagacgctgcacagctccggcctggaggtggtg
gtctccaagggcaacagcgatgaaaacagcaaggcgtccaacgaaagcctggtcggagag
ggcagcggaaacggaaagaaaaacaaggacatcggctacaagctcggccaccgcagggcc
ctgttcgagaaacgcaagcggctcagtgactacgccttgatatttggcatgtttgggatt
gttgtcatggtgacagagactgaactatcttggggggtttatacaaaggaatcctcatat
tcatttgcactgaaatgccttatcagcctctccactgttattttgcttggtcttattata
atgtaccatgcccgggaaatccagctcttcatggtggacaacggtgcggacgactggcgg
atcgccatgacgtacgagcgcatcttcttcattgtgctggagctgctggtgtgtgccatc
caccccatcccgggacagtacgtcttcacgtggacggcgcgcctggccttcacctatgtg
ccctcggtggcggacgccgacgtggacatcatcctgtccatccccatgttcctgcggctc
tacctgatcggccgcgtcatgctgctgcacagcaagctgttcacggacgcgtcgtcgcgc
agcatcggcgcgctcaacaagatcaacttcaacacgcgcttcgtcatgaagacgctcatg
accatctgccccggcaccgtgctgctggtcttcagcatctcctcctggatcatcgccgcc
tggaccgtgcgcgtctgtgagagggataccatgtaccacgacaaacaggaagtgaccagt
aacttcctgggggcgatgtggctaatctctataactttcctctctattggctatggagac
atggtcccacacacatactgtggcaaaggcgtgtgtctgctaacgggaatcatgggagct
ggttgcactgcactagtggttgccgtggtagccaggaaattggaactcaccaaggctgag
aaacatgtccacaacttcatgatggatacacagctctgtaaacgagttaagaacacagct
gccaatgtactcagggaaacatggctcatctacaaacacacaaagttagtgaagaagatt
gatcatgccaaagtgcgcaaacaccagcgcaagtttctacaggccatccatcaagctcag
aagcttcgcagtgtgaagatggagcagaggaaactcaatgaccaggcaaacaccctggtg
gacctggctaagacccaaaacgtgatgtacgacctggtgtcggagctgcaggagcggagc
gaggagctggataagcgcattggcacgctggaggacaaactggactcagtgacgggcacc
ctccaggccctgccatgtctcatctcccaagccataacccagcagcagcaggacctcctg
gacagcttcatgcaccgctaccggcctgcctcgctgggttcggaccgctcctggacccct
tctcggcgccggaggtcaccttccacggcgccacacacctcctcggacagtggctag
DBGET
integrated database retrieval system
