Clupea harengus (Atlantic herring): 105900575
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Entry
105900575 CDS
T09045
Symbol
rreb1b
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105900575 (rreb1b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105900575 (rreb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
zf-C2H2_11
Actin_micro
zf-C2H2_REST
zf-met
Motif
Other DBs
NCBI-GeneID:
105900575
NCBI-ProteinID:
XP_042559715
Ensembl:
ENSCHAG00000026571
UniProt:
A0A8M1K6Z3
LinkDB
All DBs
Position
25:complement(8473261..8504776)
Genome browser
AA seq
1771 aa
AA seq
DB search
MDMNSGSTEQTSVGGGATADMPKDMVQSDTTHEHLQGKADNENESQSAEKALREDDVNGR
EGGREMEEARRGGEEGGDLTPINSMMNTVMNAGQINGGVDPISTTSTPVKTPSKSSPSVN
RTGRRNQEVKEDRATFICPLCDKNCGTQHALTMHIRQHNTESGATDHSCSICGKALSSAS
SLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPNTVLNSNPPSPTKRRRLCA
KRKPSVEDDGDIADQSPNKKVLMEDQAGEQGRGKREEELLHCPICFKTFICKYGLESHME
THPDTTLRCNLCCITFRTHRGLLRHNSVIHKQLPTDPSGRPFIQSNPSVPLGFSDLAFID
FSCHKFPQIAQVWCETNLRRCSSKFHRFVCEVCNKAFPLQESLDLHTATHKSTDTATGGA
QTPSADDLTGADKPGISAADEKQEGEGEAVPKDPPPSEDEQKNSFMEYLGLQHKSKVKPA
QSEADVQQAILDSIRVIRVEPPVTNLPQEASSTLSLPLLEPISLQGLTQTSALSLLSLQP
LTRSFVIGPDSSLLVRPLSGQAGVDVQQILKMATSVSSQMTIPALAKASGHAQQADSKHV
PPLKPKPLVTPRSSVGTSTPPPPPMSAQQASPGCISPSLPPPTGHLLRSPNQSSSSSSAS
SSSSSSPNQGCNWENVQISSDSAVTTVPYDASLGGDKHEEAGGNEKHKAPSKTEYPCRFC
TQVFSFPAGLQAHMRHHLGASPYQCSICSYAAPDKATLIRHLRTHSGERPYVCRLCHYPF
TVKANCERHLRKKHMKNTRKEIEKNIEYVTSSGSSGTIGSATLDLLEPAGASTTVCRYCG
EDLKNYRALQIHLRTHNGCQRKPFECRQCGAAFLAKRNCIHHLLKCHPEVPEREIEEHIT
ALTPVMPATTVQGNQPLSSSNGLFTGTSPQSVKHVTSSYTLSADQDQPLDFSNKSNNVAI
KREAAPSPQPSTYDCSMEPIDLSIKKEKKKMKREVADPVPIPLALADIKKELPSSSTHKA
PEESPILQRPFQISPPLLVSALNTEQPKSTTRLKPLLPKPSVVPSTAELAPLASIAQIIS
SVSAAPALLKAARSSSSSSSSSSPCMAESSRGLVDVEALNDKALAGTISPDPIVEDSVTG
NSKKKKGRKRSASEGIDDSGLVMASMLDLESSGEFPSVEKMLATTDANKFSPYLRSPVEL
LPEEMERERQSTSEEEKEGHRERPRQRPQSKGKKNAYSNSVQKMTCPYCPRVFPWASSLQ
RHMLTHTGQKPYPCPQCDAFFSTKSNCERHLLRKHGLTSRLLQNGGLRSKSRGEDGSQGS
AESMSDTEQGSADAGDAYPTSEGSKGSGEAQEPTLQEQLTASEQRRAQRGSDDADDSKTD
DMESTAVEDSDDTGSNKSLDVNLACKLIDFKLSPGGQQELEGSSADEFQHTCPTCKKSFR
HATTLNRHQKSHQQEIQAEEPAKKKVRPPRQTPSTSPKAEKERDGGTPEKDANGSSVETS
GAEEDEREKDQEDRSDEDEDSGSSEYKGGDGEHGSAGKTDKRKKVCNMCNKRFWSLQDLT
RHMRSHTGERPFKCQTCERTFTLKHSLVRHQRIHQKPQDSKEMDAEDEDEEMNEALMRDE
LGSEEGEGFPGASGSESEFTPCSTNPAEKESEKESADNHEAEKGEEKQEEEEEEEEEEEE
EEEEEEEEKEEEEEEEGEKEEAAAAVVIGEKKEEEAGEALVDETGVSSEEPLKESKANSV
SSESLPGGASESCQGQADDMAEAEKQEEPTQ
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaacagcggctccactgagcagacgagtgttggaggcggggccaccgctgac
atgccaaaggacatggtccaatcagacaccacacacgagcacctccaagggaaggccgac
aacgagaacgagtcgcaaagcgctgagaaggcgctccgggaggacgatgtaaacggccga
gaaggaggccgagagatggaggaggcgcggcgcggcggggaggagggaggagacctgacc
cccatcaactccatgatgaacacagtcatgaacgcggggcagatcaacggaggcgtggac
cccatttccaccacctcgacgcccgtcaagacgcccagcaagtcgtccccctctgtgaat
cgtacggggagaaggaatcaggaggtcaaagaggaccgcgcgactttcatttgccccttg
tgtgacaagaactgtggcacccagcacgcgctcactatgcacatcagacagcacaacact
gagagcggcgccaccgaccactcgtgcagcatctgtggaaaggccctgagctcggccagc
tcgctggaccgccacatgctggtgcacagcggcgagcggccctacaagtgctccttctgt
ggacagaccttcaccaccaacggcaacatgcacagacacatgaaaatccacgacaaggac
ccaaacactgtcctgaactcaaacccgccctccccaaccaagcgcaggcgcctctgtgcc
aagaggaagcccagtgtggaggatgacggggatatagctgaccagtcacccaataaaaag
gtactgatggaggatcaggcaggggaacaaggtcgagggaagcgcgaggaggagctcctg
cactgtcccatctgcttcaagaccttcatctgtaaatatgggctcgagtcccacatggag
actcatccagacactactctgaggtgtaacctgtgctgcatcaccttccgtactcatcga
ggccttctccgccacaactcggtcatccataagcagttacccaccgacccctcaggacga
cccttcatccagagcaacccctcggtgccgctgggcttcagcgacctggctttcatcgac
ttctcctgtcacaagtttcctcaaattgcccaggtttggtgtgaaaccaacctgcgtaga
tgctcaagcaagtttcaccggttcgtgtgtgaggtctgcaacaaggcctttccactgcag
gagtccctggatctgcacacagccacacacaaatccaccgacaccgccacaggtggggct
cagacaccaagtgctgatgacctcaccggcgcagataaacccgggattagcgctgcagat
gagaaacaggagggggagggggaggctgtgccaaaggatccgccaccctcggaggatgag
cagaagaacagctttatggagtatctgggcctgcagcacaagtctaaggtgaaacctgcc
cagtcggaggcggacgtccagcaggccatcttggacagcatccgggtgatccgcgtggag
ccccctgtgacgaacctacctcaggaggccagcagcaccctaagtctccccctgctggag
cccatctccctccagggtctgacccagaccagtgcccttagcctgctctccctgcagccc
ctcaccaggagctttgtcatcgggccggacagcagcttgctggtgaggcccctcagtggc
caggccggggtggacgtgcagcagatcctgaagatggccacctccgtgtcctctcagatg
accatccccgccttagccaaggcgtccggccatgcccagcaggccgactccaagcacgtg
ccgccgctcaaacccaagccgctggtgacgccgcgctccagcgtgggcacctccacccct
ccaccccctcccatgagtgcccagcaggcctcacccggctgcatcagccccagcctgcca
cccccgacgggccacctcctcaggtcacccaatcaatcgtcatcttcatcctccgcttcg
tcgtcctcttcctcatcccccaaccagggttgtaactgggagaacgtgcagatcagttcc
gacagcgctgtgaccaccgtgccttacgacgcctccctgggcggtgacaaacacgaggag
gcaggtggtaatgagaaacacaaggccccctcgaagaccgagtacccctgccgcttctgc
acccaggtgttctccttccccgccggcctccaggctcacatgcgccaccacctgggagcc
tccccctaccagtgcagcatctgcagctacgcggcccccgacaaggccacgctgatccgt
cacctgcggacgcacagcggggagcggccctacgtctgccgcctctgccactaccccttc
accgtcaaggccaactgcgagcgtcacctgcgcaagaagcacatgaagaacacccgtaaa
gagatcgagaagaacatcgagtacgtgacgtcctcgggttcaagtggcaccatcggctcg
gcgacgctggacctcctggagccggcaggtgccagcaccaccgtctgccggtactgcgga
gaagatctcaaaaactacagggcgcttcagatccatctgcgtacccacaacggctgccag
cgcaagccgttcgagtgccgacagtgcggagcagccttcctggccaagaggaactgcatt
catcacctgctgaaatgccaccctgaggtcccagagagggagatcgaggagcacatcact
gctctgacgccggttatgcctgccaccactgttcagggcaaccagcccctgtcctcctca
aacgggctcttcacaggaacctctcctcagtcggtcaaacacgtcaccagctcatacact
ctcagtgccgatcaggaccagcctctcgacttctccaacaagtctaataacgttgccatc
aaacgggaggcggcaccttcgccacaaccctcaacttatgactgctccatggagccaatt
gacctctccattaagaaggagaagaagaagatgaagcgagaggtggccgaccctgtgccc
atccctttggcactggcggatatcaagaaggagctgccctcctccagcacgcacaaagcg
cccgaggagagccccatccttcagaggccttttcagatatctcctccgctgctggtctcc
gctctcaacactgagcaacccaagtccaccacgaggctgaagccgctgttgcccaaacca
agtgtggtgcctagcaccgctgaactcgcccctctcgcttcaatcgctcagatcatctcc
tctgtgtctgctgccccggcactgctcaaagcagccaggagcagcagcagcagcagcagc
agcagcagcccctgcatggcagagagcagcagaggactggtggatgtggaggccttgaat
gacaaggctctggctggcacgattagcccggacccgattgtggaggactctgtcacaggg
aactcgaagaagaagaaaggcaggaagcgatctgcctccgagggaatcgacgacagcggc
ctggtcatggccagcatgctggacctggagtccagcggggagtttcccagcgtggagaag
atgctagccaccacggatgctaacaagttcagcccttatttgcgaagcccggtggaactc
ctgccggaggagatggagagagagaggcagtccaccagcgaagaagagaaagaagggcat
agggagagaccgaggcaacgacctcagagcaaagggaagaagaatgcctactccaattca
gtgcagaagatgacctgcccttactgtccacgggtgtttccttgggctagctcgttgcag
agacacatgctaacacatacaggtcagaagccatatccatgtccacagtgtgatgcattc
ttctccaccaagtccaactgtgagcgccacttgctccgcaaacacggcctcaccagtcgc
ctgcttcagaacggcgggttgcgctccaaatccagaggagaggatggctcccaaggaagt
gcagagagcatgtccgacacagagcaaggatccgcagatgctggggacgcgtaccctacc
tctgaagggtccaaaggcagcggtgaggcccaggagcccactctgcaggagcagctcaca
gcctcagagcagaggagggcccagagagggtcggacgacgccgacgacagcaagacggac
gacatggagagcacggccgtcgaggacagcgacgacaccgggagcaacaaaagcctggat
gtgaatctggcctgcaagctcatcgacttcaagctgtcgccaggcggacagcaggagctg
gagggcagctccgcggacgagtttcagcacacctgccccacctgcaagaagagcttccgc
cacgccaccaccctcaaccgccatcagaagtcccatcagcaggagatccaggcggaagag
cctgcgaagaagaaggtgcgtccgccgagacagactcccagcacctctcctaaagcggag
aaggaacgggacggaggaaccccggaaaaagacgcgaacggcagcagcgtggagacctcc
ggggccgaggaggacgagagagaaaaggaccaagaggacaggagcgatgaggacgaggac
agcggttcctccgagtataagggcggggacggtgagcacggatccgcgggcaaaacagac
aagaggaagaaagtctgtaacatgtgcaacaagcggttctggagccttcaggacctgacc
agacatatgcgttcacacacaggtgagaggccatttaaatgccaaacctgcgagcggact
ttcaccctaaagcacagcctagtgaggcatcagcgcatccaccagaagcctcaggacagc
aaggagatggatgccgaggacgaggacgaggagatgaacgaggccctgatgagggatgaa
ctgggctcggaggagggagagggtttccccggcgcttctggaagtgagagtgaattcacc
ccctgcagcaccaaccctgctgagaaagagagcgagaaggagtcagcggataaccatgaa
gctgaaaaaggagaggagaaacaagaagaagaagaagaagaagaagaagaagaggaggag
gaggaggaagaagaagaggaggagaaggaggaggaggaagaagaagagggggagaaggag
gaggcagcagcggcagtggtgattggggagaaaaaggaagaggaagcaggagaagcactt
gtggatgaaacaggggtgtcatcagaggagcccttgaaagagtctaaagccaatagtgtt
tcctcagaaagcctgccaggtggcgctagtgagtcctgtcagggccaagctgatgacatg
gcagaggctgagaaacaagaagagcccactcagtga
DBGET
integrated database retrieval system
