Clupea harengus (Atlantic herring): 105900629
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Entry
105900629 CDS
T09045
Symbol
jph1b
Name
(RefSeq) junctophilin-1b
KO
K19530
junctophilin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
105900629 (jph1b)
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Gene cluster
GFIT
Motif
Pfam:
MORN
Flp1_like
CMV_1a
Motif
Other DBs
NCBI-GeneID:
105900629
NCBI-ProteinID:
XP_012683427
Ensembl:
ENSCHAG00000011219
UniProt:
A0A6P3VX89
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Position
25:complement(9931016..9953155)
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AA seq
661 aa
AA seq
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MTGGRFDFDDGGTYCGGWEDGKAHGHGICTGPKGQGEYSGSWSNGFEVVGVYTWPSGNTY
QGYWAQGKRHGLGVESKGRWLYRGEWAHGFKGRYGVRQSLNTPARYEGTWSNGLQDGYGV
ETYGDGGTFQGQWMGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHDHL
SDSPAGTRGGFVLNFHSDSELGSSKKKGLFRRGSLFGSLKQLRKSDSRSSISSKRSSARS
DATMSRISSSDANSTISFGDGDMPDEYLPAEDNVDATTTEAYMGEWKNDKRNGFGVSERT
NGMKYEGEWTNNKRHGYGCTIFPDGTKEEGKYKNNVLVRGIKKQLIQLKNTKTRQKVDRA
VEGAVRAAAIARTKVEIATSRTAHARAKAEVADQSALSASQDGDIARAVARELSPNFHQP
GPDYIKQRFNEPLDIKEVPEVKKEKSESPHFYRKGTTPTHTPTQSPGPTPPPSPPPVKKK
PFFSRKQDNKSPAPESIVTGITKAASKISLKQETRQEVVPPPKPAKLPLPVANTYSSPGN
GELLSEYHGYKVKADVMIPRDPSEDEMEIVETHVELEKAPPPAKQYRAPTPKPTLVKESK
PEPKLKKQESLRPKSLSESKKASMEITTDIAEQESGPNSILVILVMLINIGLAIIFVHFL
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggacggtttgacttcgacgatggcggcacatattgcggtggttgggaggat
ggaaaagcccacggacacggtatctgcacgggccccaagggccagggcgaatactccggg
tcctggtctaacggcttcgaggtagttggcgtgtacacctggccaagtggaaatacgtat
cagggctactgggcgcaagggaaacgccacgggctcggcgttgagtcgaaagggaggtgg
ctctatcgtggagagtgggctcacggatttaaggggcgatatggggtccgacaaagcctc
aatacacctgctagatatgagggcacatggagtaatggtctgcaagatggatatggggtt
gagacctatggtgatggtggcacgttccagggccagtggatgggcggcatgcgccacggc
tatggcgtgcggcagagcgtcccctacggcatggccacggtgatccgctcgccgctgcgc
acgtccctggcctcgttgcgcagcgagcagagcaacggctccgtgctccacgaccacctg
tcggacagcccggcgggcacgcgtggcggcttcgtgctcaacttccacagcgacagcgag
ctgggctccagcaagaagaagggcctgttccgccgcggctcgctcttcggcagcctgaag
cagctgcgcaagtccgactcgcgctcgtccatctccagcaagcgcagctcggcgcgcagc
gacgccaccatgagccgcatcagctccagcgacgccaactccaccatcagcttcggcgac
ggcgacatgcccgacgaatacctgccggccgaggacaacgtggacgccaccaccaccgag
gcctacatgggtgagtggaagaacgacaagcgcaacggctttggtgtcagtgagcgcacc
aacggcatgaagtacgagggggagtggacgaacaacaagcgccacggctacgggtgcacg
atattccccgacggcaccaaggaggaagggaagtacaaaaataacgttctggtgcggggc
atcaagaagcagctcattcaactgaaaaacaccaagacgaggcagaaggttgaccgcgct
gtggagggagctgtccgtgcagccgccattgccaggactaaagtggaaatagccacctca
aggacggcacacgccagggccaaggcagaggttgctgaccagtctgctttgtcggccagc
caggatggagacatcgcccgggcagtggctcgagagctgtctcccaacttccatcagcca
ggccccgactacatcaaacagaggtttaatgagccactggacattaaagaagtcccagag
gtgaagaaggagaagtcagaaagcccgcacttctaccgcaaagggacgacccccacccac
acccccactcagagcccggggcccacgcctcccccctccccgccccccgtcaaaaagaag
ccctttttcagccgaaaacaagacaataagtcgcccgctccggagagcattgtcacgggc
atcacaaaggccgcctccaagatatcactaaaacaggaaaccaggcaggaagtggttccg
ccacccaagcctgccaagttgccattgccggtcgccaacacctactccagtcccggcaat
ggcgagctgctctcggagtaccacggttacaaagtcaaggccgatgtgatgatcccacga
gacccttcagaggatgagatggagatcgtggagacccatgtggagctagagaaagcacca
ccccctgcaaagcaatacagagcacctacccctaaacccacgcttgtcaaagagagcaaa
cctgagccaaaactcaagaagcaggagtccttgaggccaaagagtctatcagaaagcaag
aaagccagcatggagattaccaccgacattgctgaacaagaatccggtcctaactcaatt
ctggtcatccttgtgatgcttattaatatcggtctagctattattttcgtccatttcctc
acttga
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