Clupea harengus (Atlantic herring): 105900632
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Entry
105900632 CDS
T09045
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6 isoform X1
KO
K17897
GATA-binding protein 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105900632 (gata6)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105900632 (gata6)
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
105900632
NCBI-ProteinID:
XP_012683431
Ensembl:
ENSCHAG00000020533
UniProt:
A0A6P3VWX1
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Position
25:10842534..10849298
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AA seq
540 aa
AA seq
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MSFTVARSTSCREPSSFRGRRLQHPLRSSFCETVKGSWMDLGENSWSMVKREVTSSPGSP
ADHSYLQGDRRDRHTSEELRSPAPPQTHLDTVGTRRTEGRSLHSYVHFGHHNTALPSSED
ITLFTDLDQGNKLIISGGAHKSGLIVDPSDMYQTLAIAAAQTQAGYDSPTASYMHSNPNS
PVYVPTSRVGPMIPSLPYLQSNVSSQPSHPVNSHPVWSQPTPESPSYSTGSPHTSNRFHY
SPSPPMNNGTSRDSSYSSPLNVNSRDQYNLTRPIGGSYASPYGGYVAPQLSQLSTPWPGG
PFENSMLHSLQTRGASLSIRGPNGDILDDMGESRECVNCGSISTPLWRRDGTGHFLCNAC
GLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKL
HGVPRPLAMKKEGIQTRKRKPKTLNKSKGSSGSNSVPMTPTSSSSSNSEECTKNSPPTTQ
VSVSSANHSAMAGQGEVVSSTNSAVKYPVQESLYTSVGLTSSADVTGSVRGETWCPMALA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcacggtggcgagaagtaccagctgcagagaaccttcatcatttcggggtagg
cgcctacaacacccactccgttcttcattttgtgagacagttaaaggatcctggatggac
ctgggtgaaaacagctggtcaatggtcaagcgtgaggtcaccagcagcccagggtcgccg
gctgatcatagctacttgcagggtgacaggagggaccgccacacctcggaggagttgagg
tcaccggcgccgccgcaaacgcatcttgacactgtgggaacccgacgcacagagggcagg
tctttacactcctacgttcactttggacatcataacaccgccctacccagctcagaggac
atcacgctgttcacggatttggaccagggcaacaaactcatcatctccggtggtgcacac
aagagtggactaatcgtggaccctagcgacatgtaccaaacactggcaatcgccgcggct
caaactcaggcgggttatgattcgcctacagccagctatatgcactccaacccgaattca
cccgtttatgtaccgacatcccgggttgggcctatgattccgagtctcccttacttgcag
tcaaacgtgtcgtctcagccgagtcatccggtgaacagccatccggtatggtcgcagcca
acccccgagagcccgtcgtacagcacagggagcccccacacctccaatcgtttccattac
tctccaagcccgccaatgaacaatgggacatccagggacagtagctactcaagtcctctg
aatgtgaacagcagagatcagtataaccttacccgaccgatcggtggttcctatgccagc
ccctacggagggtatgtggcaccgcagctatcacagttgtccactccatggccaggagga
ccattcgagaactccatgctacattccttgcaaacaagaggcgcatccttatctatccga
ggacctaatggagatatactggatgacatgggtgagagccgggagtgtgtcaactgcggc
tccatatccaccccgctgtggagacgcgacggcacgggtcactttctctgcaacgcatgt
ggtctgtacagcaaaatgaatggactcagccggccattaattaaaccccagaagcgcatg
tcatcatcaaggcggatcgggctctcctgtgccaactgccagaccagcaccaccactttg
tggcgcaggaacgccgagggggaaccagtgtgtaacgcttgcggactttacacgaaatta
cacggggtaccacgaccgctcgctatgaagaaagagggaattcagacgagaaagcgaaaa
ccaaaaaccttgaacaaatcaaaaggatcctccggaagtaattctgttcccatgactccg
acctcgtcctcatcttccaactctgaggagtgcacgaagaacagtccaccgacaacgcag
gtgtcagtgtcttcggcgaaccactctgccatggctggccaaggagaggttgtcagctcc
accaactccgcagtgaagtaccccgtacaggagagcctctacaccagtgtgggacttaca
tcctccgccgacgtgacgggttccgtcagaggagagacctggtgcccgatggccttggct
tga
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