Clupea harengus (Atlantic herring): 105900639
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Entry
105900639 CDS
T09045
Name
(RefSeq) calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X1
KO
K13755
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase [EC:
3.1.4.17
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00230
Purine metabolism
char01100
Metabolic pathways
char04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
105900639
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105900639
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.17 3',5'-cyclic-nucleotide phosphodiesterase
105900639
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Gene cluster
GFIT
Motif
Pfam:
PDEase_I
PDEase_I_N
Exonuc_VII_S
Motif
Other DBs
NCBI-GeneID:
105900639
NCBI-ProteinID:
XP_012683441
Ensembl:
ENSCHAG00000027874
UniProt:
A0A6P3VYI5
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Position
5:complement(2133111..2144182)
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AA seq
520 aa
AA seq
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MAELVKVRKKHLQTPISRLKSMVRQLEDKDVDLEELKRNLEYTASLLEAVYIDGTRQTLE
AEDDLQQLRSDGVPSEVRDWLASTFTQRPRRVSRRPDEKPKFRSIVHAVQAGIFVERMFR
KAYTVSMPDQPAEVTHCLRDVDRWNFDVFALDSVSSGHALQTLFVELIVRYELNSRFKIP
ISCLMSFLPALERGYGKHNNPYHSHTHAADVTQTMHCLLLRTGLVHWLTELEVMACLFAA
AIHDYEHTGTTNNFHIHTRSELAMMYNDRSVQESHHLSATFRLLQDDQMNIFTNLSREEW
VELRALVIEMVLATDMSSHLAQVKEMKTYLQQQERIDKPKALSLLLHTADISHPSKPWVL
HSRWTKALMEEFFRQGDKEAELGLPFSPLCDRNGTLIAQSQIGFIDFIVDPTFSLLTDMA
EKVVIPLVQQNPGPLDPCNRHSSLWKESSRGLEWSLAHITAELVSFRSTWTRHTEDNKIK
WKESESNGANDQSIPEEHSSHREDLSGENSQEHPVNNTKQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactggtgaaagttcgtaagaaacaccttcagactccgatttcaaggctcaag
agtatggtcaggcagctggaagataaggatgtggatctggaggagctaaaaaggaacctg
gagtacacggcatccttactcgaggctgtgtacatcgatgggacgagacagacactagag
gcggaggacgacctccagcagctccgctcagatggcgtgccctcagaggtgcgtgattgg
ctggcctccaccttcacccagcggccacggcgggtgagccgacgccccgatgagaagccc
aagttccgcagcatcgtccacgccgtgcaggccggaatattcgtggagaggatgtttcgc
aaggcctacacggtgtccatgccagaccagccagctgaggttacccactgtctccgggat
gtagaccgctggaactttgacgtgtttgctctggactctgtgagctcaggacatgcgcta
caaaccctttttgtcgagctcatcgtcagatatgagctcaacagtcgatttaagatacca
atttcctgtttgatgtccttcctgcctgcactagaaagaggctatggcaagcacaacaac
ccttaccacagccacacacatgcagctgatgtcacccagacaatgcactgtctactcctc
cgcactgggctcgtgcactggctcactgagctggaagtcatggcttgtctattcgcagca
gccatccatgactatgagcacacaggaaccaccaacaattttcacattcacaccaggtct
gagttagccatgatgtacaacgatcgctctgttcaggagagccaccacctcagtgccact
ttccgtctgctccaggatgaccagatgaacattttcaccaacctgtccagagaagaatgg
gtagagctccgtgctcttgtcatagagatggtacttgccacagacatgtcctctcatctc
gctcaggtaaaagaaatgaagacctatctacaacagcaagagagaatagacaagcccaaa
gccctctccctgctactccatacggcagacataagccatccatctaagccctgggtcctt
cactcccgctggaccaaagctctcatggaggagttcttcagacagggcgacaaagaggca
gaactgggcctacccttttcaccactgtgtgatcgtaacggcaccttgatagcacagtct
caaataggcttcattgactttattgtggacccaacattctccttattgacggatatggct
gagaaggttgtcatccctctagtacaacagaatcctggacctctggacccctgcaacaga
cacagttccctgtggaaggagagttccagagggttggagtggagcctagctcacatcaca
gcagaacttgtaagcttcagatcaacatggacgcgccacacagaggacaataagatcaag
tggaaggagagtgagtccaatggagccaatgatcagagcatcccagaggagcactcttct
catagagaggacctgtcaggggaaaactcccaggagcaccctgtaaacaacactaaacag
tag
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