KEGG   Clupea harengus (Atlantic herring): 105900666
Entry
105900666         CDS       T09045                                 
Name
(RefSeq) sorting nexin-4-like isoform X2
  KO
K17919  sorting nexin-4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105900666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105900666
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:char04990]
    105900666
Membrane trafficking [BR:char04131]
 SNARE
  SNARE associated proteins
   Others
    105900666
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    105900666
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    105900666
Domain-containing proteins not elsewhere classified [BR:char04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   105900666
SSDB
Motif
Pfam: PX
Other DBs
NCBI-GeneID: 105900666
NCBI-ProteinID: XP_012683469
Ensembl: ENSCHAG00000007306
UniProt: A0A6P3VWZ5
LinkDB
Position
16:complement(22769279..22779227)
AA seq 433 aa
MADAEREDAAETDTPNASDTQEKNTNITMAEDGSTLLKRMEITVAEAEKRTGKKAVNMQE
TYTVYLLETRPSAAVNEGQSVAPDALWRRYSEFELLRNYLLVTYPFIVVPPLPEKRAEFV
WHKLSADNMDPDFVERRRVGLENFLLRVASHPVMSSDGIFYHFLTQERGWKEVVYETGFQ
AKAESRLRALNATFRVKNPDKRFMEMKHYSDELQSITSQLLRARARVADRLYGVYKVHGN
YGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASIDDILEEEEHYADQIKEYLFFSEALRAV
CRKHELSQYELETESLDLASKKQQRDELATGTMRTFSFKGMTTKLFGQETADQREARLKL
LEEQIVEGEETVREKTTECEEHVCSGWVDIQRFKEQKDRDLREAFINYAFMQMSMCRKGI
QMWTNAKECFSKM
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggcggatgcggagcgcgaggatgctgcggaaacggacaccccaaacgcgagcgacacg
caggagaaaaacacgaacatcacgatggcggaggacggttcgaccctgctgaaaagaatg
gagattactgtggccgaggccgagaaacggaccgggaaaaaggctgtgaacatgcaagag
acctacacagtctatcttttagagactcggccctcagctgctgtgaatgaaggacagagt
gtggccccggacgccctgtggagacgctacagcgagtttgagctgctcaggaactacctg
ctggtcacataccccttcatcgtggtgcctcctctgcctgagaagagggcagagtttgtg
tggcacaagctctctgctgataacatggatccagactttgtggagcgcaggagagtcggg
ctggaaaacttcctcttgagagtggcgtcacatccggtcatgtccagtgacgggatcttc
taccatttcctcacacaggagcgaggatggaaggaggtggtgtacgagactgggtttcag
gcaaaggcagagtctcgtctcagagcgctgaacgcaaccttcagggtgaagaatccagac
aagcgttttatggagatgaaacactacagtgatgaactccagtccatcacttcacaacta
cttagagcacgtgctagagttgcggatagattatatggagtgtataaagtacatgggaac
tatggaagagtcttcagtgagtggagcgccatcgagaaagagatgggagatggactacag
agtgcaggacatcatatggatgcctatgcagcctcaatagatgacattttggaggaggag
gaacactatgcagaccagatcaaagagtatctcttcttttctgaagctttaagggctgtc
tgtcgcaagcacgagctctctcagtatgagctggagactgaatctctggacctcgcgtct
aagaaacaacaacgagacgagctagccactgggaccatgcggacgttctcgtttaaaggc
atgaccacaaagctgtttggccaggagacggcagaccagcgagaggccaggcttaagctc
ctggaggagcagattgtcgagggcgaggagaccgtccgcgagaagacaaccgaatgcgaa
gaacacgtgtgcagtggatgggtggacatacagcgctttaaggagcagaaggaccgagac
ctgagggaggccttcatcaactatgccttcatgcagatgagcatgtgcaggaagggcatc
caaatgtggactaatgccaaagagtgcttcagtaagatgtga

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