Clupea harengus (Atlantic herring): 105900761
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Entry
105900761 CDS
T09045
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105900761 (lrrc4ca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
Ig_2
LRR_14
LRR_9
LRRNT
LRRCT
Sp38
LRR_RPS2
Ig_6
DUF7617
Syndecan
Motif
Other DBs
NCBI-GeneID:
105900761
NCBI-ProteinID:
XP_031421019
Ensembl:
ENSCHAG00000014088
UniProt:
A0A6P8F7E5
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Position
3:complement(24927687..24987017)
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AA seq
645 aa
AA seq
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MLNKMTSSPQQQTMRGPRWNRALSDPLFVLLLFLQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQISKNQIRSIEIGA
FNGLSSLNTLELFDNRLTTIPNGAFEYLSKLKDLWLRNNPIESISSNAFNRVPSLRRLDL
GELRRLTYISDTAFEGLSNLRYLNLGMCNLKEIPNLHPLVRLGEMEMSGNQLAIIKPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVQLH
HNPWNCNCDILWLSWWLKEMVPGNTSCCARCSSPASFRGRYIGELDQSNFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSVVTHGNYQVRISVLNDGTLNFTNVSMQD
TGTYTCMVSNSAGNTTASATLNVSSTEASTFTYFTTVTVETMEHEEGHSTVPQRVGPTPS
SGIWESSTLASTTSTSARLPRTTKSTERPYTIPVTPLGEGPFNGLDEVMKTTKIIIGCFV
AITLMAAVMLIIFYKMRKQHHQQNHHAPARSIEIITVDEDCVPGGQAMERHLALAQLEHE
HLNHYNSNFKVPYNHVNTINSIHSSAHEPLLIRAGSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacatcctccccgcagcagcagaccatgagaggtcctaggtggaac
cgggccctgtccgacccgctgttcgtgctgctgctcttcctccagctgctggtggtggcg
gggctggtgcgtgcccagacctgcccgtccgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacgcgtcgcggcctgcgtgacgtgcccgacggcatctccaccaacacgcgc
tacctaaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cgccacctggagatcctgcagatcagcaagaaccagatccgcagcatcgagatcggcgcc
ttcaacggcctgtccagcctgaacactctggagctcttcgacaaccggctcaccactatc
cctaacggggccttcgagtacctctccaagctcaaagacctctggctccgtaacaacccc
attgagagcatctcttccaatgccttcaaccgcgtgccatcgctgcggcgcctggacctg
ggcgagctgcgtcggctcacctacatctcggacacggcctttgagggcctcagcaatctg
cgctacctgaacctgggcatgtgcaacctgaaggagatccccaacctgcacccgttggtg
cggctgggcgagatggagatgtccggcaaccagctggccatcatcaagccgggctccttc
aagggcctcgtccacctgcagaagctgtggatgatgcatgctcagatccagaccatcgag
aggaacgcttttgacgacctgcaatcgctggtggagctcaacctggcccacaacaacctc
accctcctgccccacgacctcttcaccccactgcaccatctggagagggtgcagctgcac
cacaacccctggaactgcaactgtgacatcctgtggcttagctggtggttgaaggagatg
gtgcccggcaacaccagctgctgtgcccgctgcagcagcccggcgagcttcagggggcgc
tacatcggcgagctggaccagagcaacttccactgctatgcgccggtgatcgtggagccg
ccggccgacctgaacgtgacagagggcatggcggcggagctgaaatgccgcgccagctcg
ctgacctctgtcagctggataacgccgaacggctccgtcgtgacacacggcaactaccag
gtgcgcatctccgtactcaacgacggcacactcaacttcaccaacgtcagcatgcaggac
acgggcacgtacacgtgcatggtgagcaactcggcgggcaacaccacggcctcggccacg
ctcaacgtgtcctccaccgaggccagcaccttcacctacttcaccactgtcaccgtggag
accatggagcacgaggaggggcactccacagtaccgcagagggtcggccccaccccctcc
tccggcatctgggagtcctccacgctggcctccaccacctcgacctcggcgcggctgcca
cggaccaccaagtccacagagaggccctacaccatccctgtcacccccctgggagagggc
cccttcaatgggctggacgaggtgatgaagaccaccaagatcatcatcggctgcttcgtt
gccattacgctcatggcggctgtgatgctcatcatcttctacaagatgcgcaagcagcac
caccagcagaaccaccacgccccggcgcgcagcatcgagatcatcaccgtggacgaggac
tgcgtgcccggtgggcaggccatggagcgtcacctggctctggcgcagctggagcacgag
catctcaaccactacaactccaacttcaaggtcccctacaaccacgtcaacaccatcaac
tccatacacagctcggcgcacgaacctttgctaatccgtgcgggctcgaaagacaatgta
caagagacccaaatctga
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