Clupea harengus (Atlantic herring): 105900814
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Entry
105900814 CDS
T09045
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105900814
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
105900814
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Pcc1
Motif
Other DBs
NCBI-GeneID:
105900814
NCBI-ProteinID:
XP_031439298
UniProt:
A0A6P8GJY1
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Position
16:complement(1628262..1647171)
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AA seq
726 aa
AA seq
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MTEAELVFHKKKKKNKTKKQLLEAVPEPGNPPETTTTGVDSHKKHKHKKKKTKSEKDDCG
PVEGQCDTREGQNKKKRKHNAETVSVTQEAADAAAAQEREVKKKKKKRRIEEPDRPGENS
EAEVALTAVQTNLEPVPQKRVKRKAKVRKTHTQPAVDTHSPTDARLHPDDVPKAPVLDID
YAIWQDILVFHKKKKNKTKKQLLEAVLEPGKPPETTTTGVDSHKKHKHKKKKTKSEKDDC
RPVEGQCDTRERQNKKKRKHDAENVSVTQEAADAAAAQEREVKKKKKKKRRIEEPDRPGE
NSEAEAALTAVQTNLEPVPQKRVKRKVKVRKTHTQPAADTHSPTDARFHPDDVPEAPVLG
VDDAIRQEILEFLPHFTFHSTVMVKNVIRYDLPRFRVYKKQGIPLRTGWFTAAENKQLKQ
NVKDFLDVSGIDTEFKLFRPQRFPDEKVTIQRLKRKFNFLRCLCAGIPRSWHNIHNRAMR
FCNRENYMGRFTEDENKVLKELYALHGSNWTTISDKMGRSCEAVKGRFGQMCENHGPWSE
AELKVLLTCLHQQLLKRAEPGGEGGDGSAVIQKMDLYKNLAWMRVAKQVKTRSWFKCQHK
WMNYLKGKMKTGGKIHGRKNIEGQIQLIKAINEMAVEESSDIVWDDLTHLFGNTPPVYLQ
MKFHQLKMTYVPDWNRKSFCDIIDFLYEKTLPKLEKDLKGCKDAEDADEPAELRQSYKLS
EIFPNL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcagagctggtctttcataaaaagaagaaaaagaacaagaccaagaagcaa
cttttagaggcggtgccggagcccggcaatcctcctgagacaaccactacgggagtcgac
tctcacaagaaacataaacacaaaaagaagaaaacaaagagtgagaaagatgactgtgga
cccgtcgagggccagtgtgacacaagagaagggcaaaacaaaaagaaaagaaaacacaat
gcagagaccgtaagtgtgacacaagaggctgcagatgctgctgctgctcaggagagagag
gtgaagaaaaagaagaagaaaaggagaattgaagagccagaccgtcctggagagaactca
gaagcagaggtggcactcacagcggtgcaaaccaaccttgaaccagtcccccagaaacga
gtgaagcgcaaggcaaaggtcagaaagacacacacacagcctgctgtagacacacactct
cccacagacgcacggcttcacccagatgatgtgcctaaagcgcctgtgctggacattgac
tatgccatctggcaggatatcctggtcttccataaaaagaagaagaacaagaccaagaag
caacttttagaggcggtgctggagcccggcaaacctcctgagacaaccactacgggagtc
gactctcacaagaaacataaacacaaaaagaagaaaacaaagagtgagaaagatgactgt
agacccgtcgagggccagtgtgacacaagagaaaggcagaacaaaaagaaaagaaaacac
gatgcagagaacgtaagtgtgacacaagaggctgcagatgctgctgctgctcaggagaga
gaggtgaagaaaaagaagaagaagaaaaggagaattgaagagccagaccgtcctggagag
aactcagaagcagaggcggcactcacagcggtgcaaaccaaccttgaaccagtcccccag
aaacgagtgaagcgcaaggtgaaggtcagaaagacacacacacagcctgctgcagacaca
cactctcccacagacgcacggtttcacccagatgatgtgcctgaagcgcctgtgctgggc
gttgacgatgccatccggcaggagatcctggagttcctgcctcacttcacgtttcacagc
accgtcatggttaagaatgtcatcaggtacgacctgccccgcttcagggtatacaagaag
caagggatccctctgcgaacagggtggttcaccgcggccgagaacaagcagctgaaacag
aacgtaaaggacttcctggacgtttccgggatcgacaccgagttcaagctttttagaccc
caacgcttcccagatgagaaggttaccatccaaaggctgaagaggaagttcaacttcctc
aggtgtttatgcgctgggatccctcgttcctggcataatatacacaaccgagccatgagg
ttttgcaacagggagaattacatggggaggtttacagaagatgagaacaaggtcttgaag
gaactgtatgcgctgcatgggtcaaactggacgaccatatcagacaagatgggccgcagt
tgtgaagccgtgaagggtcgctttggccagatgtgtgagaaccatgggccatggtcagag
gcagagttgaaggtcctcctgacgtgcttacaccagcagctgctgaagagggctgagcct
ggaggagagggtggcgacgggtctgcggtcatccaaaagatggacttgtataagaatctg
gcctggatgcgtgttgccaagcaggtcaagactcgcagctggttcaagtgccagcacaag
tggatgaattacctgaagggtaaaatgaagactggtggaaagatccacgggaggaagaac
atagaggggcagatccagctgatcaaagcgatcaatgaaatggctgtggaggaatcttca
gacatcgtgtgggatgacctcactcatctctttggcaacaccccacctgtctacttacaa
atgaagttccaccagctgaagatgacctatgtaccagactggaacagaaagtctttctgt
gacatcattgatttcctgtatgagaagaccctgccaaagctggagaaggacctgaagggc
tgtaaggatgctgaagatgctgatgagcccgcagagctgcgacagtcttacaagctgtca
gagatcttccccaacctctga
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