Clupea harengus (Atlantic herring): 105900859
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Entry
105900859 CDS
T09045
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105900859 (si:dkey-183n20.15)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105900859 (si:dkey-183n20.15)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105900859 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
Prok-RING_4
DUF1232
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
105900859
NCBI-ProteinID:
XP_012683684
Ensembl:
ENSCHAG00000021939
UniProt:
A0A6P3VX77
LinkDB
All DBs
Position
10:complement(20893679..20898888)
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AA seq
274 aa
AA seq
DB search
MMPGSISLSALREYLQYLTSSSSPAEPDPIHNSMLTCHGSQSRVSKTSEAKTVQGQPRPS
SQNTPEHGGHHHVRCGKDPCVSGALRDLHCPVCLQVATFPVETNCGHLFCAPCLISYWKH
GSWLDAISCPLCRQKVSVLCHLFAESRSDCQQREVLSHIKDYNKRYSGAPRRVTDYLCDT
PLFLHLLLRGLGNMGGLVWLFLLRVAVCCFGAAVSLASPLEGTSGPFSGALGLLDDLVVV
FLLLICVININQQMAPDATVRNRTATHGVLTGTL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaggaagcatttctctctcggctctccgtgagtacctgcagtatctgaccagc
tcaagcagcccggccgagccagacccaattcacaacagcatgctcacctgccacggctct
cagtcaagggtgtccaagacctcagaggccaaaacggttcagggtcagcccagaccctct
tcccagaatacccctgagcatggaggccaccatcacgtgaggtgtggaaaggacccatgt
gtttctggtgccctcagagacctgcactgtcctgtgtgtctgcaagtggccaccttccct
gtggagaccaactgtggacacctcttctgtgctccctgtctgatatcctactggaagcac
ggctcctggttagacgccatcagctgccccctctgtcgacagaaggttagtgtcctgtgt
cacctcttcgctgagagccgctcggactgccagcagcgggaggttctgagccacatcaaa
gactacaacaagcgctactctggggcccctcgccgggtaacagactacctgtgtgacacg
cccttgttcctgcacctgctgctgcgaggcttggggaacatggggggcctcgtgtggctc
ttcctgctcagggtggccgtctgctgtttcggggcggccgtgtccctggcctcgcctcta
gagggcacctcgggacccttcagtggagcgctggggctcctggatgacctggtggtggtc
ttcctgcttctcatctgcgtcattaacatcaaccagcagatggcgccagatgctacagtc
aggaatcgcacagcaacacatggtgtgctgactggcaccttatag
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integrated database retrieval system
