Clupea harengus (Atlantic herring): 105900868
Help
Entry
105900868 CDS
T09045
Symbol
adamts10
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105900868 (adamts10)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
105900868 (adamts10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
TSP1_spondin
Reprolysin_3
ADAMTS_CR_3
PLAC
Reprolysin_2
TSP1_CCN
Reprolysin_4
DUF4953
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
105900868
NCBI-ProteinID:
XP_031430183
Ensembl:
ENSCHAG00000015051
UniProt:
A0A6P8FPV0
LinkDB
All DBs
Position
10:complement(19865388..19907952)
Genome browser
AA seq
1142 aa
AA seq
DB search
METAWKSLACVVIVVAVVASKVVPERATGEEFMNSQAEFLSRLDQYEIAIPVRVGPGGET
LDAEEPQHPHSGHRRHRRSSPADQQQHGDQQQSQGGNSGASDGASDGASGSGGGDDTQLY
YQLSTQHSSFLLNLTLQTGLLSQQFRVEYWSRGKLAWSHPYAPSCHYTGHLQHQAGSSQV
ALSNCDGLRGVIVAGGEEFLIEPLGSAQNLTSIEGQAGRPHVVYKRSSLRHQYLDQSCGV
LDEKPGKTLAWWQRTLKTSPNQMGRSQLPLKRSVSRERYVETLVVADKMMVGYHGRRDIE
QYILAVMNVVAKLFQDSSLGNAVNIVVTRLILLMEDQPTLEVNHHAGKSLDSFCKWQKSI
QNRNGNGNAIPDNGIAHHDTAVLITRYDICIYKNKPCGTLGLAPVGGMCEPERSCSINED
IGLATAFTIAHEIGHTFGMNHDGMGNACGSRSQETAKLMAAHITMKTNPFVWSACSRDYI
TNFLDSGMGSCLNNIPPKQEFVYPSTAPGQVYDADEQCRFQYGVKSRQCKYGEVCSELWC
MSKSNRCITSSIPAAEGTICQTNTIEKGWCYKRLCVPYGTRPQGVDGGWSLWSPWEECSR
TCGGGVSSSVRHCDSPRPTVGGKYCLGERKRFRSCNTDECPSGSQDFREIQCSDFDNVPF
RGKFYTWKPYRGGGVKSCSLNCLAEGYNFYTERAPAVVDGTPCREDSLDICVNGDCKHVG
CDRILGSDIREDRCRVCGGDSSTCATIEGVFNDTLSEGGYEEVIRIPKGSVFIHIQELNV
SLNYLVLKSKGDQYFINGKLTIDTPRRFEIAGTTFHYRRPADEPESLEALGPTNITLVVM
VLVREENSGIIYRFNPPVSRDLLSGYAWHYMSWTRCSELCGGGAQIQQVVCKKQADHSVV
FNHYCDKTNKLKDKKRACNTEPCPPTWWTGEWSDCSRSCNGGVRTREILCKRKLSTAEGK
VQDDTACPDPRPPITEPCNNHSCPPEWLALNWSECSPSCGPGYRLRVVLCKSGENGDTLL
ESDCPKQGRPTSRVRCNLQRCPPPHWVAGPWGECSAKCGLGQQMRSVRCLTNTGLPSSEC
PDLQRPSSTQQCRSKCDLISPTDNPEECKDVNTVAYCPLVLRFKFCSRPYFRQMCCKTCQ
GH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggcgtggaagtccttggcctgcgtggtcattgttgtcgccgtggttgccagc
aaggtggtacccgagagagccaccggtgaagagttcatgaactcacaagcggagttcctg
tccaggctggaccagtatgagatcgccatcccggtgcgtgttgggcctgggggggagacc
ctggatgccgaggagccccaacacccccacagtgggcacagacggcaccgccgcagcagc
cccgccgaccagcagcagcatggtgaccagcaacagagtcagggtggcaacagtggtgcc
agcgatggtgccagcgatggtgccagtgggagcggtggcggtgacgacacgcagctgtac
taccagctgtccacgcagcacagcagtttcctgctgaacctcaccctgcagacggggctg
ctgtcgcaacagttccgcgtggagtactggagccggggcaagctggcctggagccacccc
tacgcccccagctgccactacaccggccacctgcagcaccaggccggctccagccaggtg
gcactcagcaactgcgacggcctgaggggggtgatcgtggccgggggcgaggagttcctc
atcgagcccctggggtccgcccaaaacctcaccagcatcgagggccaggcagggcgaccc
catgtggtgtacaagaggtcatccctgcgacaccagtacctggaccagtcctgtggcgtc
ttagatgagaagcctggaaagacgcttgcgtggtggcagcgcacgctaaagacctcgccc
aatcaaatggggcggagccagctgccactcaagcgctccgtgagccgagagcgttacgtg
gagacactggtcgtggccgacaagatgatggtcggttaccacggccgccgggacatcgag
cagtacatcctggccgtcatgaatgttgttgccaaactcttccaggattctagcctgggg
aacgctgtgaacattgtagttactcgtctcatcctgctaatggaggaccagcctacgcta
gaggtcaaccaccacgcagggaagtctttggacagcttctgtaagtggcagaaatccatc
cagaaccggaatggcaacgggaacgccatccctgataatggcatagcgcaccatgacacc
gcagtgctcatcacaaggtatgacatctgcatctacaagaacaaaccatgtgggacgtta
ggtctggctccggtaggggggatgtgtgagccagagaggagctgcagtattaatgaggac
atcggtctggcaaccgccttcaccatcgctcatgagataggacacacgtttggaatgaac
catgatggcatggggaatgcctgcggttcccgcagtcaggagacggccaagctgatggcc
gctcacatcaccatgaagaccaacccgttcgtgtggtcggcctgcagccgcgactacatc
accaacttcctggactcgggcatgggctcatgtcttaacaacatcccaccgaagcaggag
tttgtgtacccgtccacggcccccgggcaggtgtacgacgccgacgagcagtgccgcttt
cagtacggcgtgaagtctcgccagtgtaaatacggggaggtgtgcagtgagctgtggtgt
atgagcaagagcaatcgctgcatcacaagcagcatccctgccgccgaggggaccatctgc
cagaccaacaccatcgagaaagggtggtgctataagcgtttgtgtgtgccctatggaact
cgccctcagggggtcgatggtgggtggagcctctggtctccgtgggaggagtgcagtcgg
acctgtgggggcggagtctcatcatctgtccgtcactgtgacagtcccaggccaacggtt
ggagggaagtactgtctgggggagaggaagcgttttaggtcctgcaataccgatgagtgc
ccgtctgggtctcaggacttccgtgagatccagtgttcggactttgacaacgtgcctttc
agagggaaattctacacctggaaaccttatagagggggtggggttaagtcctgctccctg
aactgcctggcggaaggctataacttctacacagagcgtgcaccagcggtcgtggacggg
acaccgtgcagggaggactctctggacatctgcgtcaatggagactgcaagcacgtgggc
tgcgaccgcatcctgggctcagacattcgagaggaccgctgccgtgtgtgcgggggcgac
agcagcacctgtgccaccatcgagggcgtcttcaacgatacactgtccgaaggaggttat
gaagaggtcatccggatccccaaaggctctgtcttcatacacatccaggaactcaacgtc
tctctcaactacttggtgctgaagagcaaaggggaccagtacttcatcaacgggaagctg
accatagacacgcctcgccgcttcgagatcgccgggacgaccttccactaccgccggccc
gcagacgagcccgagtccctggaggccttggggcccacaaacatcacccttgttgtcatg
gtgctggtgagagaggagaactctgggatcatctaccgcttcaacccccctgtgagtcga
gacctcctcagcggatacgcctggcattacatgtcctggacacgctgctccgagctgtgc
ggtggaggggctcagatacagcaggtggtgtgtaagaaacaagcagaccattcggtggtg
ttcaaccactactgtgacaagacaaacaagctgaaggacaagaagagagcatgtaacaca
gaaccatgtcccccaacctggtggacgggcgagtggtctgactgtagccgtagctgtaac
ggaggcgtgcgcacgcgtgagatactgtgcaagaggaagctgtccacggcagaggggaag
gtccaggatgacaccgcctgccccgacccccgaccccccatcacagagccctgcaacaac
cacagctgcccccctgagtggctcgccctcaactggtccgagtgttcccccagctgtggt
ccaggctacaggctccgtgtggtgctgtgtaagagtggggagaacggggacaccctactg
gagtctgactgtcccaaacagggccgtcccaccagcagggtgcgctgtaacctgcagcgc
tgcccgccgccacactgggtggcaggcccctggggagagtgttctgctaagtgtggtctg
ggtcagcagatgcgctcggtgaggtgtctgaccaacaccggcctcccgtcctcagagtgt
ccggacctccagagaccctccagcacgcagcagtgtcggagcaagtgtgacctcatcagc
cccaccgacaacccagaggaatgcaaagatgtgaacacagtggcatactgccccctggtg
ttgaggttcaagttctgcagccgtccatacttcaggcagatgtgctgtaagacctgccaa
ggacactga
DBGET
integrated database retrieval system
