KEGG   Clupea harengus (Atlantic herring): 105900891
Entry
105900891         CDS       T09045                                 
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
  KO
K21891  calcium load-activated calcium channel
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105900891 (tmco1)
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:char02000]
    105900891 (tmco1)
Membrane trafficking [BR:char04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Multi-pass translocon (MPT) complex
    105900891 (tmco1)
Transporters [BR:char02000]
 Other transporters
  Pores ion channels [TC:1]
   105900891 (tmco1)
SSDB
Motif
Pfam: EMC3_TMCO1 DUF5683 DUF6809 Exonuc_VII_L VTT_dom Vpu DSHCT Nucleoside_tran DLH Piezo_TM1-24 Myc_target_1 DUF4257 SLC52_ribofla_tr Peptidase_S49_N DivIC
Other DBs
NCBI-GeneID: 105900891
NCBI-ProteinID: XP_012683721
Ensembl: ENSCHAG00000021442
UniProt: A0A6P3VXK8
LinkDB
Position
10:complement(20852719..20856889)
AA seq 188 aa
MSTMFADTILIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT
PLSYIQGLSHRNLLGEDFTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagtactatgttcgcagacacaattcttattgtgttcatttcggtttgcacggcgctg
ttagccgagggtatcacttgggtgttggtgtatcgaacagacaagtacaagcgattgaag
gcggaggttgaaaaacagagcaagaaattggaaaagaagaaggaaaccatcacagagtct
gccggacgtcagcagaagaaaaaaatagagagacaagaggagaaactgaagaacaacaac
cgagatctgtccatggtgcggatgaagtccatgtttgctataggtttttgcttcacggct
ttgatgggaatgttcaactctatctttgatgggcgagttgtggccaagcttccctttaca
ccactgtcctacatccaaggcctctctcatcgtaatctactgggagaagacttcacagac
tgctccttcatcttcctgtatattctatgcaccatgtccattcgacagaacatccagaag
atgctgggccttgctccatctcgtgctgccaccaaacaggccggaggattcctggggccc
ccccctcaggctgccaagttctcttga

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