Clupea harengus (Atlantic herring): 105900934
Help
Entry
105900934 CDS
T09045
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03420
Nucleotide excision repair
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105900934 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
105900934 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105900934 (rad23ab)
03400 DNA repair and recombination proteins [BR:
char03400
]
105900934 (rad23ab)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105900934 (rad23ab)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105900934 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
105900934
NCBI-ProteinID:
XP_031430683
Ensembl:
ENSCHAG00000002941
UniProt:
A0A6P8FRI9
LinkDB
All DBs
Position
10:complement(6687697..6695576)
Genome browser
AA seq
466 aa
AA seq
DB search
MLTITLKTLQQQTFKIEIDPELTVRVLKEKIEEKRGKDVYPATGQKLIYAGKILNDDIPL
KDYKIDEKNFVVVMVAKPKSTLPPVQASPGSIPTPALGAAPLTDIVLPTPSPVPPAPAPA
PPVPVPVPVPAPAPAPAPAPVLAQAPVPVPTHVSHPVPSHKTQSTADQAVPRPTAGSTGS
ATSAGTTTVSATPPEDTSQEVRQEQPADTNPPVLSASSLVDDLGLLEEAASILVTGQAYE
NLVTEIMSMGYEREQVIAALRASYNNPDRAVEYLLMGIPSEPEQPLVEVTRPAGATNPVA
PNPTASNPTAPNPTAPPAERPQPPTPTPTSEGAATPSQLPSSGNPLEFLRNQPQFQQMRQ
IIQQNPALLPALLQQLGRDNPQLLQQITAHQEQFVQMLNEPHGDEAEAHGSPQTNYIQVT
PQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaatcactctgaagactttacagcagcaaacatttaagatagaaatagatcca
gaactaacggtgagagtattaaaggaaaagatagaagaaaagagggggaaagatgtctat
ccagccacaggccaaaagctgatatatgctggcaaaatcctgaatgatgacatcccttta
aaggattacaaaatcgatgagaagaattttgttgtggtcatggtggcaaagccaaaatca
actctgccccctgtccaagctagtcctggctcaattccgactccagctctgggtgcagcc
ccccttacggacattgttcttcctacccccagccctgtacctcccgcccctgcccctgcc
cctcctgtccctgtccctgtccctgtccctgcccctgcccctgcccctgctccagctcca
gtcttagctcaagctccagtgcctgtgcccacccatgtttctcatccagtcccatcacat
aagactcaaagcacagctgatcaggctgtccctcgacccacggcaggaagtacagggtca
gcaacatcagctggcaccactacagtctctgctacgcctcctgaagacacgtcccaggaa
gttcgccaggaacaaccagcagacacaaatccaccagttctctcagcctccagccttgtt
gatgacttgggccttttagaagaggcggcatcaattttagttacagggcaagcttacgag
aaccttgtaactgaaatcatgtccatgggatatgaaagagagcaggtgattgctgctctt
cgagcaagttataacaatccagaccgggcagtcgagtacctgctcatgggcattccgtct
gagccggagcagccacttgtggaagtgacgcgacctgctggtgcaactaaccccgttgca
cccaaccccactgcatctaaccccactgcccctaaccccactgccccacctgcagagaga
ccccaacctcctactcctactcctacttcagaaggagcagctactccatctcagctgcca
tcttctggtaaccctctggagttcctaaggaatcagccacagttccagcagatgagacag
atcatccagcagaacccagccctcctccctgctttgctccagcagttgggcagagacaac
ccacagttgctccagcaaatcaccgcgcaccaggagcagtttgtacagatgttaaacgag
cctcatggagacgaagcggaggcccatgggtcgccacaaacaaactacatccaggttacc
ccacaggagaaagaggcaatagagaggttaaaagctttggggtttccagaaggactggtc
attcaagcttacttcgcatgtgagaaaaatgagaatcttgctgccaatttccttctccag
caaaactttgatgatgagtga
DBGET
integrated database retrieval system
