Clupea harengus (Atlantic herring): 105901058
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Entry
105901058 CDS
T09045
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 32-like isoform X2
KO
K11837
ubiquitin carboxyl-terminal hydrolase 6/32 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105901058
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105901058
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105901058
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105901058
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105901058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
EF-hand_7
EF-hand_6
EF-hand_1
UCH_1
EF-hand_5
EF-hand_8
Ubiquitin_3
eIF-5a
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
105901058
NCBI-ProteinID:
XP_012683909
Ensembl:
ENSCHAG00000026044
UniProt:
A0A6P3VXU4
LinkDB
All DBs
Position
8:10824307..10850950
Genome browser
AA seq
1586 aa
AA seq
DB search
MGAKESRIGFLSYDEAIKRVTDVELKRLRDAFRRTSGLSYYMNQQCFFKEVLGDMVPPRV
AEVIYNSFGGTSKGLHFNNLIVGLVLLTRGRDEEKTKYIFSLFASESGSYATREDIEAML
QAVDGEIPVSLRKCFTEGEKVNYEKFKSWILQNKDAFTFSRWLLSSGVCVTLTDDSDTPT
FYQTLAGVTHLEEADIIDLEKRYWLLKAQSRTGRFDLETFVPLVSPPIHTSLSEGLFHAF
DENRDNHIDFKEISCGLSACCRGPRAERQKFCFKVFDVDRDGVLSREEIREMVAALLEVW
KDNRTDFIPELSISVTDIVEDILKTHDTTKQGHLSLEDYQIWSVQSALADEFLNLLFQVC
HIVLGLRPASPEEEGQIIRGWLERESRHGLQPGDYWFLIATLWWQQWKDYVKYDSKAIVM
EQPSVFGTGRSPVGSGSGGIAHTPDAGDGGMANSHSSSEEKFSDNISSASEASETTSGSL
LPSSSTATDICFARQTDTSDTDSQSFLGTDGNVSAQRPGAIDNQTLVTSEPLKAPTLTME
GGLLRRSPRLRHGQDFEVVPEPVWRALYHWYGANLSLPRPVVRQADMERAELELFPRHLL
FLRQQPPPRTPQSNGWANMGNMPSPSAPLKRVLVYTGCFSRVGSIKDIHEYLSQRLRIKE
EDMRLWLYNNENFLTLLDDEDHSLDDLKIPDEQYMVIEVRNKDMSWPEEMSFLANSSRMS
RHKVPTEKGATGLSNLGNTCFMNSSIQCVSNTKPLTEYFTSGRHLYELNRINPIGMRGHM
AKCYGDLMQELWSGTQKSVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHEDLNR
VHEKPYVELKDSDGRPDWEVASEAWENHLRRNRSIVVDLFHGQLRSQVKCKTCGHVSARF
DPFNFLSLPLPMDNSMHLEIIVIRLDGSTPVRYGLRLNVDEKYTGLKRLLSKLCSLRPEQ
ILLAEVHSSNIKNFPLDNQKLRRAVTGFLCAFEIPVPGSPSSAVSTPVENCDEVPVLPNG
NAIMVGNSSHLKLDLMPKGMPSTVVPCGTETSPANGMPNGHEMPPIDSPFTGYIIAIHRK
MMRAELYFLSSQKNRPSLFGMPLIVPCTVHTRARDLYDAVWTQVSRLASPLPPQEASNHA
QDCDDSMGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCAIECSDEPATVGNAYIAVDWDPT
ALHLRYQTSQERMVEEHVSVELSRRAQAEPISLDSCLRAFTSEEELGEDELYYCSKCKTH
RLATKKLDLWRLPPILIVHLKRFQFVNGRWIKSQKIVKFPRENFDPSAFLTPREAEQEGS
SDELRDLGAGPKSGSGDGANSSSTASDMKESPGVARTPSGPLSREGSPSDSPKRDGRRHG
RVFPPQLDVRLQLSLSKESLDSGRESPMDLEPNATAATSGGAGGGGGELTRVDADAEGVG
GLDSALGEDAGSRDCDNTMSMSELESNGCTEDSMDLEALQDQRDRGCLDPMYDLYAISCH
SGILGGGHYVTYAKNPNRKWYCYNDSSCKELSSDEIDTDSAYILFYEQQGLDRSLFMPKT
EGKKMADTSSMDEDFEMDYKKYCVLQ
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgggggccaaagagtcaaggatcggtttcctctcttatgacgaggccatcaaaagagtc
actgatgtggaactcaaacggctgagagatgccttcaggaggaccagtggtttatcctac
tacatgaaccagcaatgcttcttcaaggaggtgctgggggatatggtgccccctcgggtg
gccgaggtaatctacaactcatttggagggacgtctaaaggcctgcacttcaacaacctt
atcgttgggcttgtgctgttgacgagggggcgggatgaagaaaagaccaagtacatcttc
agcctgtttgccagtgagtcgggcagctatgccacgcgggaggacatagaggccatgctg
caggccgtggatggagagatccctgtttccctccgcaagtgtttcactgagggggagaag
gtgaattatgagaagtttaagagctggatcctgcagaataaggatgctttcacattctcc
cgctggcttctctcaagtggcgtgtgtgtcaccctgaccgacgacagtgacacacccacc
ttctaccagacgctggccggagtgacccacttggaggaggcagacatcattgaccttgag
aagcggtactggctgctgaaggctcagtcgaggacgggccgctttgacctggagaccttc
gtgcctctggtctcgccccccattcacacatcactgagtgaaggcttgttccatgccttt
gatgagaacagggataatcacatcgacttcaaggagatctcatgtggtctgtcagcctgc
tgtaggggcccacgcgctgagaggcagaagttttgcttcaaagtgtttgatgtggatcga
gacggggtgttgtctcgagaggagatccgagagatggtggctgcactgctggaggtgtgg
aaggacaaccgcaccgacttcattccagagctgagcatcagtgtgactgacatcgtggag
gacattttgaaaacacacgacacaaccaaacagggtcatctgtctctggaggactatcag
atctggagtgtgcagagtgccctggccgacgagttcctcaacctgctgtttcaggtgtgc
catatagtcctggggttgcggcccgcttctcctgaggaggagggacagatcatcagaggc
tggctggagagagagagcagacatgggctgcagccaggagactactggtttctcatcgcc
acactgtggtggcagcagtggaaagactatgtcaaatatgacagtaaagcgatcgtgatg
gagcagccgtctgtgtttgggaccggtcggagcccagtggggtcgggttcgggggggatt
gctcacacccctgacgcgggggatggggggatggccaactctcactcctcatcggaggag
aaattctctgacaacatctccagcgcctcagaggcctcagagaccaccagtgggagtctt
ctgccctccagctccacggcgacagacatctgcttcgcgcggcagacggacacctcagac
acagacagccagagtttcctggggaccgatgggaatgtgtcggcacagagacccggcgcc
atcgacaaccaaacactcgttacctcagagccccttaaggctcccacgctgaccatggaa
ggagggctgctgaggcgctcccccaggctgcgccacgggcaggactttgaggttgtgccc
gagcccgtgtggagggcgctgtaccactggtatggagccaaccttagcctacctcggccg
gtggtcagacaggcggatatggagcgtgcggagctagagctcttccccagacacctgctc
ttcctgaggcagcagcctcctccgcgcaccccccagtccaacggctgggccaacatgggt
aacatgccctctcccagtgcccctctgaagcgagtgctggtctacacaggctgcttcagt
agagtgggttccatcaaagacatccatgagtatctgtcccagaggctccgcatcaaagag
gaggacatgaggctttggctgtacaacaacgagaactttctcacccttctggatgatgag
gaccactctctggatgacttgaagattccagatgaacaatacatggttatagaagtgcgg
aacaaggacatgagctggcccgaggagatgtccttcctagccaacagcagcaggatgagc
agacacaaagttcctactgaaaagggggcaactgggctcagtaaccttggcaacacgtgc
ttcatgaactcaagcatccagtgtgtgagcaacactaagcccctcaccgaatactttacc
tcaggacgacacctctacgagctcaacaggatcaatccgatcgggatgcggggtcatatg
gccaaatgctatggtgatctgatgcaggagctgtggagcggcacccagaaaagcgtggca
cctcttaaactcaggtggacgatagcaaagtacgcgccgcggttcaacggcttccagcag
caggactcccaggagctgctggccttcctgcttgatggtctccatgaggacctgaaccgc
gtccacgagaagccctacgtagagttgaaggacagcgatgggcgacccgactgggaggtg
gcgtctgaggcgtgggagaatcacctgaggaggaaccgttctatcgtggtggacttgttc
catggtcaactacgctcccaggtcaagtgtaagacctgcggccacgtcagcgctcgcttc
gatcccttcaacttcctctcgttgcccctgcctatggacaactccatgcacttagagatt
atagtgatccgtctggacggctccacgccggtgcggtatggcctccggctgaatgtggat
gagaagtacaccggtctcaagaggctcctgagcaagctgtgcagcctcaggcctgagcag
attctgctggctgaggtccactcatccaacattaagaactttccactggacaaccagaaa
ctgcggcgtgcagtgaccgggttcctgtgtgcgtttgagatccccgtgccaggttccccc
tcatcagccgtctctactcccgtagagaactgtgatgaggtgccagttctgccaaatgga
aacgccatcatggtggggaacagctcccacctcaagctggatctgatgccaaaggggatg
cccagcaccgtggtaccctgtggcacagagaccagccctgccaatggcatgcccaatggc
cacgagatgccacctatcgatagcccattcactggctacatcatcgccatccataggaaa
atgatgcgggcagagttgtacttcctgtcgtcccagaagaacaggcccagtctgtttggc
atgccactgatcgtgccgtgcacggtgcacacccgggcgcgggacctctacgacgccgtg
tggactcaggtgtcccgcctggccagccccctccccccacaggaggccagtaaccatgca
caggactgtgacgacagcatgggctaccagtacccctttaccctgcgcgtggtgcagaag
gatggcaactcctgtgcctggtgcccctggtacaggttctgccgaggctgtgccattgag
tgcagtgatgagccggccacggtggggaacgcctacatcgccgtggactgggaccctaca
gccctgcacctccgctaccagacctcacaggagaggatggtagaggagcatgtgagtgtg
gagctgagccggcgggcccaggctgagcccatcagtctggacagctgtctgcgggccttc
accagcgaggaggagctgggcgaggacgagctctactactgctccaagtgcaagacccac
cggctggccaccaagaagctggacctctggaggctgccccccatcctgattgtccatttg
aaaaggttccagtttgtgaacgggcggtggataaagtctcagaagatcgtgaagttcccc
agggagaattttgaccccagcgccttccttacaccaagggaggcggagcaagaaggttcc
agtgacgagctacgggacctgggggcggggccaaagtctgggagtggagatggtgctaac
tcctcctccacggccagtgacatgaaagagtctcctggtgtggcgcgcacccctagtggg
cccttgagtagggagggcagcccgagtgacagccccaagcgcgacgggcggcggcacgga
cgcgtctttcccccacagctggacgtgcggctgcagctttccctcagcaaggagagcctg
gacagtggccgcgagagccccatggacctggagcccaacgccacagctgccacctctgga
ggcgcgggaggaggaggaggagaactgacaagggtggatgcggacgcggagggcgtgggg
gggctggactcggctctgggggaggacgcaggcagcagggactgtgataacaccatgtcc
atgtcggagctggagagcaatggctgcacggaggacagcatggatttggaagccttgcag
gaccagcgcgaccggggttgtttggaccccatgtatgacctgtatgcaatatcatgtcac
tcaggaattctgggaggaggccactatgtgacatatgccaaaaacccaaacagaaaatgg
tactgctacaatgacagcagctgcaaggagttgagctcggacgagatagacacggactcc
gcttacatcctcttctacgagcagcaaggcctggacaggtccctcttcatgccaaagacg
gagggcaaaaagatggccgacaccagcagcatggatgaggactttgagatggactacaag
aagtactgcgtccttcagtga
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integrated database retrieval system
