Clupea harengus (Atlantic herring): 105901084
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Entry
105901084 CDS
T09045
Symbol
nr5a1a
Name
(RefSeq) steroidogenic factor 1a isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901084 (nr5a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105901084 (nr5a1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
105901084 (nr5a1a)
Nuclear receptors [BR:
char03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
105901084 (nr5a1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
NPL4
Motif
Other DBs
NCBI-GeneID:
105901084
NCBI-ProteinID:
XP_012683932
Ensembl:
ENSCHAG00000026368
UniProt:
A0A6P8FTW6
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Position
7:17339510..17346409
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AA seq
386 aa
AA seq
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MEFSHELEDLCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAENQTCRIDKTQR
KRCPFCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYKQDRALKQQQKALIHVSNFKLEP
SPSLAPSLQTKSSFPGGLSGLLPPLTPPDCDCVPPYCPPSLGVALQSHDSPFPGQYQYTA
APFPSRSIKSEYLDQYLISPDSPPEYSYPQGCLLGSPQTSSLLPALPPQLVLNLLRCEPD
EAQVRLKVATYLCQEQKSRGKQEKLSSFRLLCLIADQTLFSIVDWARSCIFFRELQVGDQ
MKLLHNCWSELLVLDHICRQVHHGKEGIVLLVTGEEIEMSPFSAKQGHPLSASYREPRNW
WRGCRVCRWTGKRWPASSFSSSLIQV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagtttagccatgagctcgaagatctctgtccggtgtgtggagataaggtttcaggg
taccattacggcctactgacatgtgaaagttgcaagggctttttcaagaggactgttcaa
aataacaagagatacacttgcgctgaaaaccagacatgcagaatagacaaaacccagcgt
aagagatgccctttttgtcgctttcaaaagtgcctgaacgttggaatgagattagaagcg
gtccgtgctgaccggatgcgagggggaaggaataaatttggccccatgtacaaacaagac
agggcactgaagcagcagcagaaagccctaatccatgttagcaacttcaaactagagcca
agtccttctctggccccaagcctccagaccaagagcagctttccagggggcctgtcgggg
ctcctgcccccccttacccctccggactgtgactgcgtccctccatattgccccccttct
ctgggtgtggcccttcaaagccatgacagcccctttcctggtcagtaccaatacactgcc
gctcctttcccctccaggtctatcaagtctgaataccttgaccagtacttaatttccccc
gactccccgccagagtacagttaccctcaggggtgtctgctgggatccccccaaacctcc
agcttgctccccgccctgccaccacagctggtgttgaacctgctgcgctgcgagccggat
gaagcccaggtgcggctgaaggtggcgacctacctgtgccaggagcagaaaagccggggc
aagcaggagaagctcagctcattcaggctgctgtgtctcattgcggaccagacgctcttc
tccatcgtggactgggctagaagctgcatcttcttcagggaacttcaggttggagatcag
atgaagctcctccacaactgctggagtgagttgctggtgctggatcacatctgcagacag
gtgcaccatgggaaggagggtattgtcttactagtgactggagaggagatcgagatgtcc
ccattttctgccaagcagggccaccccttatcagcctcgtacagagaacccaggaactgg
tggagaggctgcagggtctgcagatggacaggaaagagatggcctgcttcaagtttctca
tcctctttaatccaagtgtga
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