Clupea harengus (Atlantic herring): 105901090
Help
Entry
105901090 CDS
T09045
Symbol
si:dkey-3h3.3
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105901090 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105901090 (si:dkey-3h3.3)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105901090 (si:dkey-3h3.3)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105901090 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
KH_DTX3L
zf-rbx1
zf-RING_10
zf-RING_6
zf-C3HC4_4
zf-RING_11
Siva
zf-RING_4
Zn_ribbon_6
zf-C3HC4_5
DUF1272
Motif
Other DBs
NCBI-GeneID:
105901090
NCBI-ProteinID:
XP_031426542
Ensembl:
ENSCHAG00000025504
UniProt:
A0A6P8FTV4
LinkDB
All DBs
Position
7:complement(16434157..16438002)
Genome browser
AA seq
401 aa
AA seq
DB search
MVGMSEVFPKVTLTVDGGTIFKGRKTLPLEGSFEEVEKTFYELATLKKTKSVEAKRLYED
DCSPAKSVEVDSTVMRFIKEKYPKELKRIMGNDVEITTVRGREALTCVSFNPKQPVLAQF
ARQKFITFYQKIATELQMKPFDSKRSPVKLLEAEFPELLITTNPNTVTGAYVSIERLERF
LENDFKSPSRSRGHAAQKASVKDSGSPATRHPQKDEEETCPICMDTLTEKKTLPQCKHSF
CKDCVKRAFDIKPVCPVCGVLYGELKGTQPEKGTMKVTYEDKSHLPGYEKYGTIVIEYYI
PSGIQGEAHPNPGQRYEGAARTAYLPNSTEGKRVLALLQRGFDQRLIFTIGRSSTSGRNN
VVTWNDIHHKTSRYSGPSCYGYPDPEYLSRVQEELKLKGIY
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggtagggatgtctgaggtgttccccaaagtaaccctaactgtggatggaggaacaatc
tttaagggaagaaaaacactccctttggaaggttcctttgaggaagttgagaaaacattc
tacgagttggcgaccctaaagaaaaccaagtctgtggaggcgaagcgactttatgaggat
gactgttcaccagcgaagtctgtggaggtggacagtacagtcatgagattcattaaggaa
aaataccctaaggaactgaagagaattatggggaacgatgttgaaattactacagtgaga
ggaagggaagcactgacttgcgtgtcatttaatccaaagcaaccggttcttgcccagttt
gcgagacagaagttcattacgttttatcagaagattgccactgagcttcagatgaagcct
tttgattcgaagcgatctcctgtgaagttgcttgaagctgagtttccagagctgctgatt
accaccaatcccaatacagtgacaggggcctacgttagcattgagagactggagcgattt
ttagaaaatgattttaaaagcccctcaagaagtcgtgggcacgctgcacagaaggccagt
gtgaaggactctggttctccagcaacccgacatccccaaaaagatgaggaggaaacatgt
ccgatttgtatggacaccttgacagagaagaaaacattgcctcaatgtaaacattcattt
tgtaaagactgtgtgaagagagcatttgacattaagccagtgtgtccagtctgtggggtt
ttgtatggagaactgaaagggacccagcctgaaaagggcaccatgaaagtcacctacgaa
gacaagtcacacttgccaggatatgaaaaatatgggaccatagtgattgagtactacatt
ccaagtggaatacaaggggaagcgcaccccaacccagggcagaggtatgagggagcggcc
cgcacagcctatcttccaaactccacagagggcaaaagggtgctggcactgctgcagcga
ggctttgaccagaggctcatattcaccatcggccgctcatcgacctcaggcaggaacaat
gtggtcacctggaacgacatccaccataagacctcacgctacagtggccccagctgctat
ggttacccagatccggaatacctctctcgggtgcaagaagagttgaaattgaaaggaata
tattaa
DBGET
integrated database retrieval system
