Clupea harengus (Atlantic herring): 105901176
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Entry
105901176 CDS
T09045
Symbol
ptprk
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105901176 (ptprk)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105901176 (ptprk)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105901176 (ptprk)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
105901176 (ptprk)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Type II RPTP family
105901176 (ptprk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
I-set
Ig_3
ig
Y_phosphatase3
PTPlike_phytase
Ig_2
PTP_tm
Protocadherin
Motif
Other DBs
NCBI-GeneID:
105901176
NCBI-ProteinID:
XP_031437177
Ensembl:
ENSCHAG00000016248
UniProt:
A0A6P8GP71
LinkDB
All DBs
Position
15:24312136..24508516
Genome browser
AA seq
1489 aa
AA seq
DB search
MDMSILGFLLLYSPFLHVGAQLHTAQMGHAEKGGCTFDDGPAQCDYQQDPYDDFDWTHVS
AQEVPYLSPELPQGSYMMVDSSQHDVGEKSRLQLPVMKENDTHCIDFNYLLYSQDGSSPG
TLNILVKVNKGPLANPIWNVTSYTGKEWLRAELAISTFWPNEYQVIFEAEVSDGKTGFIA
IDDIQVLSYPCDRSPHFLRLGDVEVNAGQNATFQCIATVRDVKNKLWLQRRNGDDIPVAE
TKSISNRRFAASFRLKEVTNHDQDLYRCVTQSERGSGVSNFAGLIVREPPRPIAPPQLLA
VGPTYLLIQLNSNSIFGDGPIILKEVEYRMTTGSWTETHAVNSPNYKLWHLDPDTEYEIR
VLLTRPGEGGTGRPGPPLITRTKCAEPMRTPKRLKIAEIQARFIAVDWESLGYNITRCHT
FNVTICYHYHNANNQTKADCLDMDPKAPRHVVGNLPPNTNVSLKMILTNPEGRKESDETI
IQTEEDVPGPVPSPSMKATPFEDRIFLYWKEPLEPNGIITQYEISCGSVRSFDTSVLLRP
PLIVSLPWNTTHHVFSQLHPGTTYQFVIRGSTVKGFGPPATLNVTTNISAPTLQEYDSSE
AFLNETATTITVLLKPAQAKGAPISAYQIVVEELNPHRSRREATSTDCYQIPVSYQSASS
GGLPYYFAAELPPSKLVEQMSFTVGDNKTYRGFWNPPLAPRKNYNIYFQAVSSVEKETKI
QCLRLATKGATEEPEVIPDPAKQTDRVVKIAGISAGVLVFILLVLVAILLVKKRRSYYSY
SYYLKLAKKRKDAIGSTRQEMTHMVNAMDRSYADQSTMHAEDPMSVTFMDSHNFSNRLPN
DPLVPTAVLVPITDENHTAAAAAESSRLLDVPRYHCEGTESPYQTGQLHPAIRVADLLQH
INLMKTSDSYGFKEEYESFFEGQSASWDVAKKDQNRTKNRYGNIIAYDHSRVILQPMEDD
PSSDYINANYIDVSGDASSIGERVRNISPSLIWLYRDGYQRPSHYIATQGPVHETVYDFW
RMIWQEQSACIVMVTNLVEVGRVKCYKYWPDDAEVYGDFKVTFVEVEPLAEYVVRTFTLE
RRGFNEVREVKQFHFTGWPDHGVPYHATGLLSFIRRVKMSNPPGAGPIVVHCSAGAGRTG
CYIVIDIMLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGDTAIP
ACEYKAAYYDMIRIDSQSNSSHLKDEFQTLNSVTPQPQPEDCSIALLPRNHEKNRFMDML
PPDRCLPFLITIDGESSNYINAALMDSYRQPAAFIVTQHPLPNTVKDFWRLVYDYGCTSL
VMLNEIDQAQGCPQYWPEEGMLRYGPVQVECMSCSMDCDVISRLFRICNLTRPQEGYLMV
RQFQYLGWAAHREVPASKRSFLKLILQVDKWQDECEEGEGRTVVHCLNGGGRSGMFCAIS
IVCEMIKRQNVVDVFHAVKTLRNSKPNMVDSPEQYRFCYDLALEYIETS
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggatatgagcattctgggtttcctgctgttgtattccccctttctacacgtcggagcc
cagttacataccgcgcaaatgggacatgcggagaaaggtggctgcaccttcgatgatggc
cctgcacagtgtgactaccagcaggacccttacgatgacttcgactggacacacgtcagc
gcccaggaggtcccttacctctcccccgagcttccccaaggttcctacatgatggtggac
tcatctcagcacgatgtcggggagaagtctcgcctccagctgccggtcatgaaggaaaat
gacacgcactgcatcgacttcaactacttactgtacagccaagatggctccagtcccggc
actctcaacatcctcgtgaaggtcaacaaaggccctctggccaaccccatctggaacgtg
acgagctacacgggcaaagagtggctccgggccgagcttgccatcagcaccttctggccc
aatgagtatcaggtcatatttgaggcggaggtctcggatgggaagacgggcttcattgcg
attgatgacatccaggttttgagctatccatgtgaccgatctcctcacttcctgcgtttg
ggcgacgtggaggtcaacgccgggcagaacgccacgttccagtgtatcgccaccgtccga
gacgtgaagaacaagctgtggctacagagaaggaatggtgatgacattcccgtcgcagag
acaaagtccatcagcaatcgcagattcgcggcttccttcaggctgaaggaagtgaccaat
catgatcaagatctgtatcgttgtgtgacccagtcggagagaggttcgggagtgtccaac
tttgccggccttatagtcagagagcccccaaggcccatcgcgccgcctcagttgcttgct
gtggggccgacatacctcctgatccagctcaattccaactccatcttcggcgacgggccg
atcatcttgaaagaggtggagtaccgcatgacaacagggagctggacggagacccacgcc
gtcaactcgcctaactacaaactctggcacctggacccggacacagagtatgagatccgg
gtcctgctcacccgtcctggggaaggcggcaccggcagacctggcccccccctcatcacc
cgaaccaagtgtgccgagccgatgcgaacgccgaagcgcctgaagatagcggagatccag
gccaggttcatcgctgtggactgggagtcgctgggctacaacatcacccgctgccacacc
ttcaacgtcaccatctgctaccactaccacaacgccaacaaccagaccaaggccgactgc
ctggacatggacccaaaggcaccgcggcacgtggtgggcaacctgccccccaacaccaac
gtcagcctgaagatgatcctcaccaacccagagggacgcaaggagagcgacgagaccatt
attcagactgaggaggatgtgcctggcccggtgcccagtccatccatgaaagccacaccg
tttgaagatcgcatcttcctgtactggaaggagccgctggaacccaacgggatcatcact
cagtatgagatcagctgcggcagtgtgcggtcatttgacacgtcagtgttgctgcgcccg
ccgctcatcgtctccctcccctggaacaccacccaccacgtcttctcgcagctccacccg
ggcaccacctaccagttcgtcatccgcggcagcaccgtcaagggcttcggcccccccgcc
acccttaatgtcaccaccaacatctcagctcccaccctacaggagtatgacagctccgag
gccttcctgaatgagacggccacaaccatcacggtcctcctcaaacctgcccaggcaaag
ggagctccgattagcgcttatcagatcgtggtggaggagctgaaccctcaccgctcgcgg
cgcgaggctacctccacggactgctaccagatacccgtctcctaccagagcgcctccagc
ggcggcctgccgtactactttgccgccgaactgccgcccagcaagctggtggaacagatg
agcttcacggtgggggacaacaagacctaccgcggcttctggaaccctccactggcaccc
aggaagaactacaacatctacttccaggcggtcagcagcgtagagaaggaaacaaaaatt
cagtgtttgcgattggcaaccaaaggagcaacagaggagccggaggtgatccccgacccg
gccaaacagacggatcgggtggttaagatcgccggcattagtgccggggttctggtcttc
atcctgctggtgctggtggccattctgctggtcaagaagaggaggagctactattcttat
tcatactacctgaaacttgccaagaagcgcaaagacgccatcggcagcacgcggcaagag
atgacccacatggtcaatgccatggaccggagctacgccgaccagagcaccatgcatgcc
gaggaccccatgtccgtcaccttcatggactcgcacaacttcagcaacaggttgcctaat
gatccgctcgtgccgactgccgtgctagtgcccataactgatgagaaccacacagcggcc
gccgccgccgagtctagccgcctgctggacgtgccgcgctaccactgcgagggcaccgag
tcgccctaccagaccggccagctgcacccagccatccgcgtggctgacctgctccagcac
atcaacctgatgaagacctccgacagctacggcttcaaggaggagtacgagagttttttt
gagggccaatctgcttcctgggacgtggcaaaaaaagaccagaacagaaccaagaatcgc
tatggaaacatcatcgcctacgatcattctagagtcattcttcagccaatggaagacgac
ccctcctccgactacataaacgccaactacatagacgtaagtggcgatgcctcctccatt
ggcgaacgtgtgagaaacatctctccttctctcatatggctgtacagggatggctatcag
aggccaagccactacatcgccacccaaggccctgtgcatgagactgtgtacgacttctgg
aggatgatctggcaagagcagtcggcctgtatcgtcatggtaaccaacctggtggaggtc
ggacgggtcaaatgttataagtattggccagatgacgcggaggtgtatggtgatttcaaa
gtgacattcgttgaagtggagccgctggcagagtacgtcgtcaggactttcaccttggag
aggagaggcttcaacgaggtgcgggaggtgaagcagttccacttcaccggctggcccgac
cacggagtgccataccacgccaccggcctgctgtccttcatccgccgggtcaagatgtcc
aacccgcccggcgccgggcccatcgtggtgcactgcagcgctggagctgggaggacgggc
tgttacatagtgatcgacatcatgctggacatggcggagagggagggggtggtggacatc
tacaactgtgtcaaggccctgcgctctcgccgcatcaacatggtccagacagaggagcag
tacatcttcatccacgacgccatcttggaggcctgtctgtgcggggacaccgccataccg
gcctgtgaatacaaagctgcctactacgacatgatcaggatagactcccagagcaattcc
tcacacctcaaagatgaatttcagaccctgaactccgtgacaccccagccgcagccggaa
gactgcagcatcgccctgttgccacggaaccacgagaagaaccgcttcatggacatgttg
ccgcctgaccgatgtctgcctttcctcatcaccatcgacggcgagagcagcaactacatc
aacgccgctctcatggatagctacagacagccggctgccttcatcgtgacccagcaccct
ctgcccaacacagtcaaggacttctggaggctcgtgtacgactatggctgcacgtcacta
gtcatgctgaatgagattgaccaggcacagggctgccctcagtattggccagaggaagga
atgcttcgctatggtcccgttcaagttgaatgtatgtcctgctctatggattgtgatgtc
atcagtcgtctcttcagaatatgtaacctgaccagacctcaggaggggtacctgatggtg
aggcagttccagtacctaggctgggccgcacacagggaggtccctgcgtccaaacgctcc
ttcctcaagctcatcctccaggtggacaagtggcaggacgagtgtgaggagggcgaggga
cgcaccgtggtgcactgcctgaatggaggaggacgcagcggaatgttctgtgccatcagc
attgtgtgcgagatgatcaagaggcagaacgtggtggacgtgttccacgccgtcaagaca
ctgaggaacagcaagcccaacatggtggacagccctgaacagtaccgcttctgttatgac
cttgcgttggagtacatcgagacgtcataa
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