Clupea harengus (Atlantic herring): 105901184
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Entry
105901184 CDS
T09045
Symbol
elac1
Name
(RefSeq) zinc phosphodiesterase ELAC protein 1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105901184 (elac1)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
105901184 (elac1)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
105901184 (elac1)
Prokaryotic type
105901184 (elac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
105901184
NCBI-ProteinID:
XP_012684039
Ensembl:
ENSCHAG00000008288
UniProt:
A0A6P3VZK4
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Position
7:11989276..11992146
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AA seq
367 aa
AA seq
DB search
MSMDLTFLGTGSAYPSPHRGASAVVLRTEGECWLFDCGEGTQTQLMKSQLKSGKITKVFI
SHLHGDHLFGLPGLLCTVSLNSSPTQPPNCVDIYGPLGLRHFLRVALELSGSQLLFPYAV
HELEPTVDQCPPEGLLSPTVTQSSESLHPQERPGRTICLDGESDCYLLFEEKPFTVKAFR
LFHRIPSFGFCVQEHDRPGRLNTQLLKELGLKPGPRYGQLKNGETVTLENGQVVKPSEVL
EPAIPGRKVCILGDCSSMHGGGGLKACRGADILVHEATLADGHQERAVEHGHSTPSMAAA
VARSCEVRRLVLSHFSQRYKPVRLQKDNEEDNILELQIQAEDGLRGTVTEVVLAEDFLTL
PIPIKRP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggacttgacattcctcgggacgggatcagcatatccgtccccacatcgtggt
gcttcagcagtggttctccgtaccgagggagaatgttggctattcgactgtggggagggt
acacagacgcagctgatgaagagtcaacttaagtctggtaaaatcaccaaagtgttcatt
tctcatttacatggagatcacctctttggcttaccggggttgttgtgcactgtgagcctc
aactctagtcccactcaacccccgaactgtgtggacatatatggcccactaggccttagg
catttcttacgtgttgccttggagctgtcaggctctcagctccttttcccttatgccgtc
catgaacttgagcccactgtagaccagtgcccccctgaaggcctgttaagtcccacagtg
acacagagcagtgaaagtcttcatcctcaagagcggccagggcgaactatctgtttggat
ggggagagtgactgctacttgcttttcgaagagaaacctttcacagtgaaggctttcagg
ctctttcaccggattccatcctttgggttctgtgtacaggagcatgatcgtcctggacgt
ctgaacacccagttattaaaagaactaggactgaaaccgggaccacggtatgggcagctc
aaaaatggagagactgttacgttggaaaatggacaggtggtgaaaccaagtgaagtcttg
gagccagccattcctggccgaaaagtgtgcatacttggagactgcagctcaatgcacggg
ggaggcggactgaaagcatgtagaggagcagacattcttgtccacgaggcaaccctggct
gatggccaccaggaacgggctgtggagcacgggcacagcacaccaagcatggcagcagcc
gtggctcgttcctgtgaagtgcggcgcctggtgctatcccacttcagccagagatacaag
cctgttaggctgcaaaaggacaatgaagaggacaatatccttgagctccagatacaggct
gaagatggtttgagaggcactgtcacagaggttgtgttggctgaggacttcctcactttg
cccataccgatcaaaagaccttag
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