Clupea harengus (Atlantic herring): 105901200
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Entry
105901200 CDS
T09045
Symbol
lifra
Name
(RefSeq) LIF receptor subunit alpha a
KO
K05058
leukemia inhibitory factor receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105901200 (lifra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
char04050
]
105901200 (lifra)
04090 CD molecules [BR:
char04090
]
105901200 (lifra)
Cytokine receptors [BR:
char04050
]
Interleukin receptor families
IL6/12 receptor family
105901200 (lifra)
CD molecules [BR:
char04090
]
Proteins
105901200 (lifra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
LIF-R_Ig-like
LIFR_D2
LIFR_D4
Ig_RIMBP2
Pur_ac_phosph_N
Ig_J
Motif
Other DBs
NCBI-GeneID:
105901200
NCBI-ProteinID:
XP_012684063
Ensembl:
ENSCHAG00000014794
UniProt:
A0A6P3VY27
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Position
7:complement(12557553..12574183)
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AA seq
961 aa
AA seq
DB search
MLLFNRHLHKLPSMYSTLLCVLCLIFTVSPSLCQDDSPLDVPQQIRLDKDFEAQRLAVTW
HGNLGSVFDIEIYRTEFMDIVFNETVELSTGKNAGDCHWNWTSTVPLECTSHSVRIRSRD
LLRVSEWSPLQTTEGSDFPDNTGAKMYPVDKVVLAGTNTTFCCILGEGQVLQEILYMKSV
MKEVRLSRRTYAVTQTLQPPSNISGTNVFCVDETNVAVDGAVIFVGYPPGDDDLICETQD
LVSAVCQWKEGRSTHLWGRRDTRYTLNGRDCKIVKRAKKCGWEQWESNWTLVAKNPLGMR
EIRDSAPLSQRVHPVAPESLKVLVRNPRNATLQWSWRYQGYEAFPLICQVNVASNGISVT
RNYSGAGLSLVLLEDLWPYETYRARVRCGSKNYFWKWGDWSSESSFRTKMDRPETPDMWI
WMGSDKSGRVLWKPLSKTESHGDFIRYDVTQGSASDEGLQRLEVPASQLSVPLSLQDNTS
EPFVTLLARNSKWASHTSQLLVPKYLADVDVTGSEISSSDGGFDMSWLASANASRGYAVE
WFNTSCGQYCSVDWLKVPEATTSARIESRGLEAGVRYTISVYALSDEAPQLLERRHGYLE
EMVSAEPVPSLEASQYESSVLLSWQEIPLQSQRGFVQGYNVYLANISKYTLLANITDPSV
RNYTIRKLGLGTYKFTVRAYTSAGEDGGSTVSIKLEPYADLLLFEILIALAAMSGFFILV
TAVCYRKRQWVKKAFYPEIPEPKLPGQWSTSQATLDVKPSPHSMVHIVENPQWDSSKEGL
VPVSEEDEDGDESGSEPTDTDSDEPGLLRYYNHVMGDSGQAPRLPIDSSSSSVGSADTDV
TYTGIQTSPCALEVPAQVEAQAAGGYRPQAQVVQQQQQQQQPGQSDAEPKAGAPSPASFG
GYKPQCTWRPDSPDANGFDCSVGSPTSVNSSQFLIPDVSSEDSRNAVSSTTWIPSFMSGK
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttttaaccgtcacctacacaagcttcccagcatgtattccacgctgctctgc
gtcctgtgtctgatcttcacagtcagtcctagtctgtgtcaagacgattccccacttgac
gtccctcaacagatcaggctagataaagactttgaagctcagaggttggccgtcacgtgg
catggtaaccttgggtctgtcttcgacattgagatctaccgcactgagttcatggacatt
gtttttaatgagacagtggagctgagcactgggaaaaacgctggggattgccactggaac
tggacctccacggtgcctctagaatgcacctcccattcggtcaggatccgctcccgagac
ctgctccgagtcagcgagtggagccctttgcagaccactgaggggagtgacttcccagac
aacacaggggccaagatgtatccagttgacaaggtggtcctcgctggaaccaacaccact
ttctgctgtatcctgggtgaagggcaggttctgcaggagatcctctacatgaagagtgtc
atgaaggaggtcaggctgagcaggaggacatacgcggtcactcagacccttcagccgccc
tccaacatctccgggacaaacgtcttctgcgtggatgaaacaaatgtcgctgtggacggt
gctgtcatatttgttggatacccacctggtgatgacgacctgatctgtgaaacgcaggac
ctggtctctgcggtgtgtcagtggaaagaaggccgctctactcacctgtggggcagacgg
gacacacgctacaccctgaacggaagagactgtaaaattgtcaagagagccaagaaatgc
ggctgggagcagtgggagagtaactggacccttgttgccaaaaaccccttaggaatgaga
gagatcagagactcagcaccactcagccagagagtgcatcctgtggctcctgagagttta
aaagtcttggtgagaaatcctcggaatgccactttacagtggtcttggcgatatcaggga
tatgaggctttccccttgatatgccaggtcaatgttgcatctaatggaatctcagtcaca
cgtaactactcaggagcaggactgtccctggtcttgctggaggatttgtggccctatgaa
acctacagggcacgtgtccgctgtggatccaaaaactatttctggaagtggggcgactgg
agttcggagagcagcttccggaccaaaatggacaggccggagacaccagatatgtggata
tggatggggagtgacaaatccggtcgagtcctatggaaacctctatctaagaccgaaagc
cacggcgacttcattcgttacgacgttactcaaggaagtgcgtcagatgaagggttgcag
cgcctggaagtgccagcgagccaactcagtgttcccctcagcctgcaggacaacaccagc
gaaccgtttgtcacgctcctcgcccgcaactccaaatgggcttctcatacctcccaactt
ctggtccccaaatacttggcagatgtagatgttactgggtctgagatctccagtagtgat
ggaggttttgacatgtcctggcttgcctctgcaaatgcaagtcgtgggtatgcggtggaa
tggttcaacacctcctgcggtcagtactgtagtgtggactggctgaaagttccagaagct
actacgagtgccaggattgagtcacgtggccttgaggcaggagtgagatacaccatctct
gtgtatgccctctctgatgaggctccacagttgttggagagaaggcatggctatcttgag
gaaatggtttctgctgaacctgttccatccctggaggcaagtcagtacgaatccagcgtg
ttgctctcctggcaggagatcccgctgcaaagccagaggggatttgtacagggatacaat
gtttatcttgccaatatctccaaatacaccctcttagccaacatcacagatcccagtgta
aggaactacaccatcaggaagcttggacttggcacgtacaagtttactgtcagggcctac
acctcagcaggggaggatggcggctctacagtctccattaagttggagccttacgctgat
ctcctcctgtttgagatacttatcgctctggcagccatgagtggctttttcatcctggtt
accgctgtgtgctacaggaaaagacaatgggtgaagaaggccttctatccagaaatacct
gagcccaagcttccagggcagtggagcacatcccaggccacactggacgtgaagccctct
cctcacagcatggtgcacatcgtggagaacccacagtgggactccagcaaagagggcctg
gtgccggtgtccgaggaggacgaggatggcgacgagtcgggcagcgagcccaccgacacg
gactcagatgagccgggtctgctccgctactacaaccatgtgatgggagacagtggccag
gccccacgcctccccatcgactcttcctccagctccgtgggctcggccgacaccgatgtc
acctacacgggcatccagacctccccctgtgccctggaggtgccagcccaggtggaagct
caggccgcaggggggtaccgaccccaggcccaggtagtgcagcagcagcagcagcagcag
cagccgggtcagtcagatgccgagcccaaagccggagctccttccccggcctcgttcgga
ggctacaagcctcagtgcacctggaggccggactccccagatgcaaatggctttgattgt
tcggtgggcagccccacttcagtcaactcctcccagtttctgatcccagacgtctcgtcg
gaggactccaggaacgctgtgtcctcgaccacgtggattccgagcttcatgtcgggcaag
ccctga
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