Clupea harengus (Atlantic herring): 105901201
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Entry
105901201 CDS
T09045
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105901201 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105901201 (nipbla)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105901201 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
ALKBH8_N
Motif
Other DBs
NCBI-GeneID:
105901201
NCBI-ProteinID:
XP_012684064
Ensembl:
ENSCHAG00000013147
UniProt:
A0A6P3VZL9
LinkDB
All DBs
Position
7:complement(12480315..12505850)
Genome browser
AA seq
2230 aa
AA seq
DB search
MNGDTPHVPITTVAGITSLTDLLNQLPLPSPHPATTTKSLLYNGSIAEEVSCLLACQDEN
LVAQLSQSLSQVSTEHIELKNNLGRDDLEGDMPVLLQIVLSRSPNIFREKNMPIQYGTQD
GTRQPMTPQYNVTQNAMQNSPAPSNYQPASMAQSPTSGFVPQQTGPGSRFPQNSHVSSPY
TPQSPAPYMQYPHPPSYNQQQQMQQGSVLSPTIPGGMRNIHENQERDQSLRNASLPLRSP
QAVCSPTDRDGIPKAASHPPLIMQSPPPYSSPQDSLPDLLLNSPDHKQKRGKVAQGERRQ
ADKAATYDFMTSEDKLPFNAGKAGQGLMPGEPVQEKDKPLKKRKPDPHPQDPGAVENHPG
PQMAPQEAGLADHCTPLQHSHSDAQRWQEQSQQGPGVSSSSRLRRSGSQRNIPEGDRNRK
EDQEGQQKDVSKGSAPVVVLQKLSHEEVQKLMKEKHKSSKGSHKPLQHSERSSREMQAEM
DSSMLLSDRIKLGKRRRGTANDRPKYAEVSSGDDSDTERDSVRKRQKKEKDRAWAYEEPE
PRRGTSSRSRYGDHSPDASDRESPPPPSLSDVARSLQKKEKQKKRKAYEPKLTPEEMMDS
STFKRFLASLDSILENLEDIDFSLQDDDEIPQELLLGKQQLSELASESAKIKAMGITCKI
PSERLVKMMSILEKNIQDGSNLSTFMNPENDTEDEEHMWRELIMERVTKSADACLTALNI
MTSPHMPKAVYFEDVIERTLQYTKFHLQNTLYPQYDPVYRLDPQGGGLLSSRAKRARCST
SKQRVIIMLYNKVCDVVSSVAELVDIQLLTDTTILQVSSMGITPFFVENISEMQLCAIKL
VTVVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSNDADGESVHIQMVTALVLQL
IHCVVHLPSDQDAMEDSRMDEDVFINHSYETARRTAQNFLSVFLKKCGSKQGEEDYRPLF
ENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRK
DAITSNMDQRTIDRILKETSGNDEIQQLQKALLDHLEENAETAPALIFARKFYVAQWFRD
STTEAEKAMKKGQEKDKDEDDTEGRRHAKELKSTGEIMQRAEARKKFLRKLIKTTPAQYS
TLRMNSETVDYDDAGLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEV
VAVDPSILARKDMQNGVHGRLMDSSTSVREAAVELLGRFVLSRPQLTEQYYDMLIKRILD
TGISVRKRVIKILRDICLEQPTFSKVTEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTP
GNDKEAMNRKILNITDVVAACQDSGYDWFEQLLQNLLKVEEDASYKPTRKACVQLIDGLV
DYMLRYEESLSEHKSVNSTRLVSCITTLFLFCKVKADFLVKHAMTMQPYMTTKCNSKNDF
MVICNVTKILELVVPLMEHPSESYLTTIEEDLMKLIIKYGMLVVQHCVSCLGSVVNRVTH
NYKFVWACFNRYYGVLTKLKVQHQEDSNHSILDAKRPVLMRSLFTVGALCRHFDFDLDHF
KGSSQIIIKDKVLELLLYFITHEDEEVQVKAIIGLGNLLIMHPSLMFIPEVKRLYNGLLS
DIKSSVNLKIQVLKNLQMYLQEEDTRMLEADREWNKLSKQEDLKEMGDVTSGMSSSIMQL
YLKQVLEAFFHTQSNVRHFALSVIALTLNQGLIHPVQCVPYLIAMATDPEPTMRNKADQQ
LLEIDKKYTGFIHMKAAAGMKMSYQVQEAIMAHRKGMIRGFRQEESISALCSQLYSMVRS
NRQHRRAFLISLLNLFDDTSKAEVNMLLFVADNLAYFPFQTQEEPLFIMHHIDIRLSVSG
SNLLQTFKESLQRPGHPDKKEKVKQANSAMWDVDVSEEELDNPDVDVDNDGTKQKPPEEQ
QQAMPAEKKADTESESDTELEDINVVMERLPEDTAPLLDFARASQGILLLLVLKQHLKAL
YGFSDGKILKYSPTESAKIYDKAVNRKQNVHFNPRQTLEFLSNNVANAEITYDLKMKIVQ
QYLDFKLLMEHLDPDEDEEGEGEASANARNKAISALLGGSGPSAAPAHSPRNHHGADSEE
DDSDTEDKTPGARKAKRGGDSREAVGNMSETVEPADVVAILCPQYKDRPQLARVVQRTSS
GYNIRWLSGSYNSSWTEAKRREGRKLVPWLDTIKESDIIYKKLPLTASNKLTHKLAQTLR
VLYAAKVSSS
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatacgccccatgtccccatcaccactgtagcaggaatcaccagtctcaca
gacttgttgaaccaactgcctctgccctcccctcaccctgctaccaccactaagagctta
ctctacaatggcagcatcgctgaggaggtcagctgtcttctggcttgccaagatgagaat
ctggtggctcagctgtcccagagtctcagccaggtgtccactgaacacatagaactgaag
aacaacctgggcagagatgatctggaaggtgacatgccagtcctgctgcagattgttctg
tccaggagccctaatatcttcagggaaaaaaatatgccaattcaatatgggactcaggat
ggcacaaggcagcctatgacaccacaatataatgtaactcaaaatgccatgcagaacagc
ccagctccatcaaattaccagcctgcttccatggctcagagcccaactagtgggtttgtc
ccccagcagacgggtcctggcagcaggtttccccagaacagccacgtgtccagcccttac
acccctcagagtccggccccatacatgcagtaccctcatccacccagctataatcagcag
caacagatgcagcaagggtctgtactgagccccacaatccctggtggcatgaggaacatt
catgaaaatcaggagagggaccagtccttgagaaacgcttcacttcctctaaggtcacca
caggcggtgtgctcacccacagacagagatggaattcccaaagctgcctcccacccgcca
cttataatgcagtcacctccgccatactcctcacctcaagacagcttacccgacctcctg
ctcaactcccccgaccacaagcagaagagaggcaaggtggcccaaggtgaacgcaggcaa
gcggataaggctgccacctatgacttcatgacctcagaagacaagctgccattcaatgca
ggcaaggcagggcagggtctcatgccaggggagccagtgcaggaaaaagacaagccgctt
aaaaagcgcaaaccagaccctcaccctcaggacccgggagcagtggagaaccaccctggc
ccccaaatggcccctcaggaggctggcttagccgatcactgcacccctctgcagcactcc
cactcggatgcccagaggtggcaggagcagtcccagcagggcccaggagtctcgagctca
agcaggctccggcggtcagggtcacagaggaacattccggaaggggacagaaacaggaaa
gaggaccaagaggggcagcagaaagacgtcagcaagggctccgcacctgtggtggtgctg
cagaagctctcccatgaggaggtgcagaagctgatgaaggagaaacacaagagctccaag
ggctcgcacaagccccttcagcactcagagcgctctagcagagaaatgcaagcagagatg
gactccagcatgctgcttagtgatcggataaagctgggaaaacgcagacgaggcacagcc
aatgacaggcccaagtatgcagaggtcagctccggcgacgacagcgacactgagcgagac
tctgtgaggaagcgccagaaaaaggagaaagacagagcctgggcgtatgaggagcccgag
cccaggagaggcacaagctcgcgaagtcgctatggagaccatagccctgatgcctctgac
cgggaatcaccgccacctcccagcctgagtgatgttgcaaggagtctccagaaaaaagag
aagcagaagaaaagaaaggcatatgagcccaagctcacaccagaagaaatgatggactcc
tccacatttaagaggttccttgccagtctggacagcattctagaaaacctggaggacatt
gacttctctcttcaggatgatgatgaaattccacaggagctgctgctgggtaaacaacag
ctgagcgagttggccagtgagtcagccaagatcaaagccatgggcatcacctgcaagatt
ccatctgaaagactggtgaaaatgatgagcatcttggagaagaacatccaggacgggtcg
aatctctctaccttcatgaaccctgagaatgacacagaggatgaggaacacatgtggcgt
gagctcatcatggagcgcgtcaccaaatcagcggacgcgtgcttgacagcgctcaacatc
atgacgtcgccacacatgcccaaggctgtctacttcgaggatgtgattgagaggacattg
cagtacaccaagttccacttgcagaacacgctctacccccagtacgaccctgtgtaccgg
ctggaccctcagggaggaggtctgttgagttccagagccaaacgggcaagatgctcaacg
agcaagcagagagtcatcatcatgctctacaacaaagtctgtgatgttgtgagcagcgtc
gctgagctggttgatatccagctattgaccgacaccactatcctgcaggtgtcctctatg
ggcatcactcccttctttgtggaaaacatcagcgagatgcagctgtgcgccatcaaacta
gtgacagtggtgttctctcgctatgagaaacacagacagctgatcctggaggagatcttc
acctctctggccagactgcccaccagcaagcgcagtctgaggaacttcaggctgaacagc
aacgatgcggacggagagtcggtgcacatccagatggtgacagccctggtgctgcagctc
attcactgtgtggttcatctgccctctgaccaggatgccatggaggatagtaggatggat
gaggatgttttcatcaaccactcctatgaaacagccaggaggacagcccagaactttctc
tctgtgttcctaaaaaagtgtgggagcaagcagggggaggaggactaccggcctctgttt
gagaactttgtgcaggacctcttgtccaccgtcaacaagccagagtggccagcagcagag
ctgctactcagtctgctggggagactactggtccaccagttcagcaacaagcagacggag
atggctctgagggtggcatcgctggactatctgggcactgtggctgccaggctccgcaaa
gacgcaatcaccagcaacatggaccagcgcaccatagaccgcatcctcaaagagacctca
ggtaatgatgagatccagcagctccagaaggctctgttggatcatctggaagagaatgca
gagactgcacccgcactgatttttgcccgtaagttctacgtagcacagtggttcagggac
tcaaccacagaggcagagaaggcgatgaagaagggccaggaaaaggacaaggacgaggac
gacacggagggtcgacgtcacgccaaggagctcaagagcacgggggagatcatgcagaga
gcagaggcccgcaagaagttcctgcgcaagctcatcaagaccactcctgcccagtatagt
acactcagaatgaactcagaaactgtggactatgatgatgctggcttgattgtgcgctac
ctagcctctatgaggccatttgcacagagctttgacatctacttgacccagatcctgagg
gtcctgggagagagtgccatagccgtcaggactaaagccatgaaatgcctctcagaggtg
gtggctgtggacccaagcatactcgcgcggaaagacatgcagaatggggttcatgggcgt
ctgatggactcatccaccagcgtgcgggaggctgccgtggagctgctgggccgcttcgtg
ctgagccgcccccagctcacagagcagtactacgacatgctcatcaagaggatactagac
acgggcatcagtgtgaggaagagggtgataaagatcctgagagacatctgcctggagcag
cccacattcagcaaggtcactgagatgtgtgtgaagatgatccgcagggtcaatgacgaa
gagggcatcaagaaactggtgaatgaaaccttccaaaagctgtggttcaccccaacgcct
ggcaatgacaaagaggccatgaacaggaagattctgaacatcactgatgtggttgctgct
tgccaagacagtggttacgactggtttgaacagcttctacagaatctgctcaaggttgag
gaggatgcctcgtacaagcccaccaggaaagcctgtgtgcagctgattgacggtctggtg
gattacatgctgcgctatgaggaatccctctcagagcataaaagcgtgaactccacacgg
ctggtgtcctgcatcactaccctctttctgttctgcaaagtcaaggccgacttcttggtc
aaacatgccatgactatgcagccctacatgaccaccaaatgcaactcgaagaatgacttc
atggtgatctgcaatgtgacgaagatcctggagcttgtggtgcctctgatggagcatcca
agcgagagctacctgaccaccattgaggaggatctgatgaagctcatcatcaaatacggc
atgctggtggtccaacactgtgtgagctgccttggttctgtagtcaacagagtgacacac
aactacaagtttgtttgggcttgctttaatcgatactacggcgtcctgaccaaactgaag
gttcagcaccaggaggactccaaccactccatactggatgccaagcggccagtcctgatg
cgctccctcttcactgtaggcgctctgtgtcgccacttcgactttgacctggaccacttc
aagggcagcagccaaatcattatcaaagataaggttctggagctccttctgtacttcata
acccatgaggatgaggaggtgcaagtgaaagccatcattggcttagggaatctgctcatc
atgcaccccagcctgatgttcatccccgaggtgaagcggctttacaatggcctgttgtcg
gatatcaagagttcggtgaacctgaagatccaggtgctgaagaacctgcagatgtacctg
caggaggaggacacgcgcatgcttgaggccgacagggaatggaacaagctgtccaagcag
gaggacctgaaggagatgggcgacgtgacgtccggcatgagcagctccatcatgcagctc
tacctgaagcaggtgctggaggcattcttccacacacagtccaatgtgcgccactttgcc
ctcagcgtcatcgccctcaccctcaaccaaggtctcatccaccccgtgcagtgtgttcca
tacctgattgcaatggcaacagacccagagcctactatgaggaacaaggcagaccagcag
ctgctggagattgacaagaaatacaccggattcattcacatgaaggctgcggccgggatg
aagatgtcgtaccaggtgcaggaggccatcatggcgcaccgtaagggaatgatcaggggc
ttccggcaggaggagtccatcagcgccctgtgctcacagctctactccatggtgcgcagc
aacaggcagcaccgccgcgccttcctcatctcgctgctcaacctgttcgatgacacctcg
aaggcggaggtgaacatgctgctgttcgtagcagacaacctggcctacttccccttccag
acccaggaagagccgctcttcatcatgcaccacatcgacatcaggctgtccgtgtccggt
agcaatctgctgcagaccttcaaagagtccttgcagaggcccggtcatccagacaagaag
gagaaggtgaagcaagccaacagtgccatgtgggacgtggatgttagcgaggaggagctg
gacaaccctgatgtcgacgtggacaacgacggaacaaagcagaagcctccggaagagcag
cagcaggcgatgcccgcagagaagaaggcggacaccgagtcagagtctgacactgaactg
gaggacatcaacgtggtgatggagcggctgcccgaagacaccgctcccctgttggacttc
gcccgcgcctcgcagggcatcctgctgttgctggtcctcaaacagcacctcaaagctctt
tacggcttctcggacggcaaaatcctcaagtactcccccacagagtcagcgaagatatat
gacaaggctgtcaatcggaagcaaaatgtgcacttcaaccctcgccagaccctcgagttc
ctgtccaacaacgtagccaacgctgagatcacttacgacctcaagatgaagatcgtccaa
cagtaccttgactttaagttgctgatggagcacctggacccagatgaggatgaggaggga
gagggagaggcaagtgctaacgctcggaacaaagccatcagcgccctgctcggaggatcc
ggccccagcgcagccccggcccacagcccccggaaccatcatggcgccgactcagaggag
gacgacagtgacactgaggataaaacccctggggccaggaaggcgaagcgtggtggggac
agcagggaggcagtggggaacatgtcggaaacggtggagccagctgacgtggtggccatc
ctgtgcccacagtacaaggaccggcctcagctcgcccgtgtggtgcagaggaccagcagt
ggctacaacatccgctggctgtcaggctcctacaacagctcctggacggaggccaagagg
cgcgagggacgcaaactagtgccttggctggataccatcaaggagtcagatatcatctac
aagaaactccccctgacggccagcaacaagctgacccacaaattagcgcagacgctgcgt
gtgctctatgcggccaaggtatcttccagctag
DBGET
integrated database retrieval system